RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 PAXBP1Q9Y5B6 917 aa17.16■□□□□ 0.34
SREBF1-219ENST00000580540 ATXN2Q99700 1313 aaKnown RBP17.16■□□□□ 0.34
SREBF1-219ENST00000580540 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.15■□□□□ 0.34
SREBF1-219ENST00000580540 A0A1B0GVM2 712 aa17.15■□□□□ 0.34
SREBF1-219ENST00000580540 TCAF2A6NFQ2 919 aa17.15■□□□□ 0.34
SREBF1-219ENST00000580540 PATE3B3GLJ2 98 aa17.15■□□□□ 0.34
SREBF1-219ENST00000580540 KHNYNO15037 678 aaKnown RBP17.15■□□□□ 0.34
SREBF1-219ENST00000580540 UNGP13051 313 aaPredicted RBP17.15■□□□□ 0.34
SREBF1-219ENST00000580540 FERP16591 822 aa17.15■□□□□ 0.34
SREBF1-219ENST00000580540 ITPKAP23677 461 aa17.15■□□□□ 0.34
SREBF1-219ENST00000580540 IRAK1P51617 712 aa17.15■□□□□ 0.34
SREBF1-219ENST00000580540 COPAP53621 1224 aa17.15■□□□□ 0.34
SREBF1-219ENST00000580540 ZNF33AQ06730 810 aa17.15■□□□□ 0.34
SREBF1-219ENST00000580540 ZNF177Q13360 481 aaPredicted RBP17.15■□□□□ 0.34
SREBF1-219ENST00000580540 CAMK2GQ13555 558 aaPredicted RBP17.15■□□□□ 0.34
SREBF1-219ENST00000580540 CDO1Q16878 200 aa17.15■□□□□ 0.34
SREBF1-219ENST00000580540 PLEKHG6Q3KR16 790 aa17.15■□□□□ 0.34
SREBF1-219ENST00000580540 TRNP1Q6NT89 227 aa17.15■□□□□ 0.34
SREBF1-219ENST00000580540 FAM124AQ86V42 546 aa17.15■□□□□ 0.34
SREBF1-219ENST00000580540 LUZP1Q86V48 1076 aa17.15■□□□□ 0.34
SREBF1-219ENST00000580540 NT5C3BQ969T7 300 aa17.15■□□□□ 0.34
SREBF1-219ENST00000580540 TOE1Q96GM8 510 aaKnown RBP17.15■□□□□ 0.34
SREBF1-219ENST00000580540 PRSS16Q9NQE7 514 aa17.15■□□□□ 0.34
SREBF1-219ENST00000580540 ANLNQ9NQW6 1124 aa17.15■□□□□ 0.34
SREBF1-219ENST00000580540 ITM2CQ9NQX7 267 aa17.15■□□□□ 0.34
SREBF1-219ENST00000580540 TMPRSS4Q9NRS4 437 aa17.15■□□□□ 0.34
SREBF1-219ENST00000580540 ARHGEF38Q9NXL2 777 aa17.15■□□□□ 0.34
SREBF1-219ENST00000580540 DMXL1Q9Y485 3027 aa17.15■□□□□ 0.34
SREBF1-219ENST00000580540 NUP205Q92621 2012 aa17.14■□□□□ 0.34
SREBF1-219ENST00000580540 DCDC2BA2VCK2 349 aa17.14■□□□□ 0.33
SREBF1-219ENST00000580540 TNFAIP3P21580 790 aa17.14■□□□□ 0.33
SREBF1-219ENST00000580540 MZF1P28698 734 aaPredicted RBP17.14■□□□□ 0.33
SREBF1-219ENST00000580540 CD6P30203 668 aa17.14■□□□□ 0.33
SREBF1-219ENST00000580540 SDC4P31431 198 aa17.14■□□□□ 0.33
SREBF1-219ENST00000580540 RDXP35241 583 aaKnown RBP17.14■□□□□ 0.33
SREBF1-219ENST00000580540 TPMTP51580 245 aa17.14■□□□□ 0.33
SREBF1-219ENST00000580540 ECT2LQ008S8 904 aa17.14■□□□□ 0.33
SREBF1-219ENST00000580540 SPDYCQ5MJ68 293 aa17.14■□□□□ 0.33
SREBF1-219ENST00000580540 LRRC31Q6UY01 552 aa17.14■□□□□ 0.33
SREBF1-219ENST00000580540 FAM131BQ86XD5 332 aa17.14■□□□□ 0.33
SREBF1-219ENST00000580540 SYT12Q8IV01 421 aa17.14■□□□□ 0.33
SREBF1-219ENST00000580540 RGL4Q8IZJ4 473 aa17.14■□□□□ 0.33
SREBF1-219ENST00000580540 JOSD2Q8TAC2 188 aa17.14■□□□□ 0.33
SREBF1-219ENST00000580540 RXFP2Q8WXD0 754 aa17.14■□□□□ 0.33
SREBF1-219ENST00000580540 PGAP3Q96FM1 320 aaPredicted RBP17.14■□□□□ 0.33
SREBF1-219ENST00000580540 RPL10LQ96L21 214 aaKnown RBP17.14■□□□□ 0.33
SREBF1-219ENST00000580540 HSPA12BQ96MM6 686 aa17.14■□□□□ 0.33
SREBF1-219ENST00000580540 RTKNQ9BST9 563 aa17.14■□□□□ 0.33
SREBF1-219ENST00000580540 SELENOOQ9BVL4 669 aa17.14■□□□□ 0.33
SREBF1-219ENST00000580540 GPR174Q9BXC1 333 aa17.14■□□□□ 0.33
SREBF1-219ENST00000580540 TMEM74BQ9NUR3 256 aa17.14■□□□□ 0.33
SREBF1-219ENST00000580540 A0A1B0GTH6 734 aa17.13■□□□□ 0.33
SREBF1-219ENST00000580540 TTC34A8MYJ7 566 aa17.13■□□□□ 0.33
SREBF1-219ENST00000580540 GOLGA6L19H0YKK7 550 aa17.13■□□□□ 0.33
SREBF1-219ENST00000580540 SRGAP2O75044 1071 aa17.13■□□□□ 0.33
SREBF1-219ENST00000580540 CFIP05156 583 aa17.13■□□□□ 0.33
SREBF1-219ENST00000580540 CALB1P05937 261 aa17.13■□□□□ 0.33
SREBF1-219ENST00000580540 KRT3P12035 628 aa17.13■□□□□ 0.33
SREBF1-219ENST00000580540 KCNA4P22459 653 aa17.13■□□□□ 0.33
SREBF1-219ENST00000580540 ASIC2Q16515 512 aa17.13■□□□□ 0.33
SREBF1-219ENST00000580540 C15orf59Q2T9L4 293 aaPredicted RBP17.13■□□□□ 0.33
SREBF1-219ENST00000580540 TRIM61Q5EBN2 209 aa17.13■□□□□ 0.33
SREBF1-219ENST00000580540 IL31Q6EBC2 164 aa17.13■□□□□ 0.33
SREBF1-219ENST00000580540 METTL3Q86U44 580 aaKnown RBP17.13■□□□□ 0.33
SREBF1-219ENST00000580540 GANCQ8TET4 914 aa17.13■□□□□ 0.33
SREBF1-219ENST00000580540 MRGPRX3Q96LB0 322 aa17.13■□□□□ 0.33
SREBF1-219ENST00000580540 EDEM2Q9BV94 578 aa17.13■□□□□ 0.33
SREBF1-219ENST00000580540 USP36Q9P275 1121 aaKnown RBP17.13■□□□□ 0.33
SREBF1-219ENST00000580540 SLCO3A1Q9UIG8 710 aa17.13■□□□□ 0.33
SREBF1-219ENST00000580540 CKAP5Q14008 2032 aa17.13■□□□□ 0.33
SREBF1-219ENST00000580540 PLXND1Q9Y4D7 1925 aa17.12■□□□□ 0.33
SREBF1-219ENST00000580540 LRRC53A6NM62 1247 aa17.12■□□□□ 0.33
SREBF1-219ENST00000580540 TMCO5BA8MYB1 307 aa17.12■□□□□ 0.33
SREBF1-219ENST00000580540 I6L893 689 aaPredicted RBP17.12■□□□□ 0.33
SREBF1-219ENST00000580540 SLC30A4O14863 429 aa17.12■□□□□ 0.33
SREBF1-219ENST00000580540 SIN3BO75182 1162 aa17.12■□□□□ 0.33
SREBF1-219ENST00000580540 CLDN11O75508 207 aa17.12■□□□□ 0.33
SREBF1-219ENST00000580540 CNTN5O94779 1100 aa17.12■□□□□ 0.33
SREBF1-219ENST00000580540 DNTTP04053 509 aa17.12■□□□□ 0.33
SREBF1-219ENST00000580540 SRPRAP08240 638 aaKnown RBP17.12■□□□□ 0.33
SREBF1-219ENST00000580540 OXTRP30559 389 aa17.12■□□□□ 0.33
SREBF1-219ENST00000580540 NNMTP40261 264 aa17.12■□□□□ 0.33
SREBF1-219ENST00000580540 STK19P49842 368 aaPredicted RBP17.12■□□□□ 0.33
SREBF1-219ENST00000580540 CDH4P55283 916 aa17.12■□□□□ 0.33
SREBF1-219ENST00000580540 OXCT1P55809 520 aa17.12■□□□□ 0.33
SREBF1-219ENST00000580540 RPS14P62263 151 aaKnown RBP17.12■□□□□ 0.33
SREBF1-219ENST00000580540 IRX4P78413 519 aa17.12■□□□□ 0.33
SREBF1-219ENST00000580540 FANCCQ00597 558 aa17.12■□□□□ 0.33
SREBF1-219ENST00000580540 PTP4A2Q12974 167 aa17.12■□□□□ 0.33
SREBF1-219ENST00000580540 SLC12A1Q13621 1099 aa17.12■□□□□ 0.33
SREBF1-219ENST00000580540 ZSCAN23Q3MJ62 389 aa17.12■□□□□ 0.33
SREBF1-219ENST00000580540 RAB6CQ53S08 254 aa17.12■□□□□ 0.33
SREBF1-219ENST00000580540 SH3PXD2AQ5TCZ1 1133 aa17.12■□□□□ 0.33
SREBF1-219ENST00000580540 STPG1Q5TH74 334 aa17.12■□□□□ 0.33
SREBF1-219ENST00000580540 CXorf57Q6NSI4 855 aaKnown RBP17.12■□□□□ 0.33
SREBF1-219ENST00000580540 ARCQ7LC44 396 aa17.12■□□□□ 0.33
SREBF1-219ENST00000580540 IRF2BP2Q7Z5L9 587 aa17.12■□□□□ 0.33
SREBF1-219ENST00000580540 PHF13Q86YI8 300 aaPredicted RBP17.12■□□□□ 0.33
SREBF1-219ENST00000580540 SLC41A1Q8IVJ1 513 aa17.12■□□□□ 0.33
SREBF1-219ENST00000580540 BAP1Q92560 729 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms