RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 RFWD3Q6PCD5 774 aa16.22■□□□□ 0.19
USB1-208ENST00000563207 SLC23A3Q6PIS1 610 aa16.22■□□□□ 0.19
USB1-208ENST00000563207 C3orf20Q8ND61 904 aa16.22■□□□□ 0.19
USB1-208ENST00000563207 CYB5D2Q8WUJ1 264 aa16.22■□□□□ 0.19
USB1-208ENST00000563207 PLD4Q96BZ4 506 aa16.22■□□□□ 0.19
USB1-208ENST00000563207 SERPINB11Q96P15 392 aa16.22■□□□□ 0.19
USB1-208ENST00000563207 CIPCQ9C0C6 399 aa16.22■□□□□ 0.19
USB1-208ENST00000563207 ELOVL2Q9NXB9 296 aa16.22■□□□□ 0.19
USB1-208ENST00000563207 SPEGQ15772 3267 aa16.22■□□□□ 0.19
USB1-208ENST00000563207 CKAP5Q14008 2032 aa16.21■□□□□ 0.19
USB1-208ENST00000563207 ACACBO00763 2458 aa16.21■□□□□ 0.19
USB1-208ENST00000563207 AKAP13Q12802 2813 aa16.21■□□□□ 0.19
USB1-208ENST00000563207 A0A087X0T9 212 aa16.21■□□□□ 0.19
USB1-208ENST00000563207 SIGLEC16A6NMB1 481 aa16.21■□□□□ 0.19
USB1-208ENST00000563207 AKR1B10O60218 316 aa16.21■□□□□ 0.19
USB1-208ENST00000563207 FAM228BP0C875 321 aa16.21■□□□□ 0.19
USB1-208ENST00000563207 HLA-FP30511 346 aa16.21■□□□□ 0.19
USB1-208ENST00000563207 SLC6A4P31645 630 aa16.21■□□□□ 0.19
USB1-208ENST00000563207 MATKP42679 507 aa16.21■□□□□ 0.19
USB1-208ENST00000563207 COPAP53621 1224 aa16.21■□□□□ 0.19
USB1-208ENST00000563207 GSDMDP57764 484 aa16.21■□□□□ 0.19
USB1-208ENST00000563207 RING1Q06587 406 aa16.21■□□□□ 0.19
USB1-208ENST00000563207 MTA1Q13330 715 aa16.21■□□□□ 0.19
USB1-208ENST00000563207 TAF5Q15542 800 aa16.21■□□□□ 0.19
USB1-208ENST00000563207 DCAF6Q58WW2 860 aa16.21■□□□□ 0.19
USB1-208ENST00000563207 DAB2IPQ5VWQ8 1189 aa16.21■□□□□ 0.19
USB1-208ENST00000563207 TMTC1Q8IUR5 882 aa16.21■□□□□ 0.19
USB1-208ENST00000563207 CCDC170Q8IYT3 715 aa16.21■□□□□ 0.19
USB1-208ENST00000563207 DEFB106AQ8N104 65 aa16.21■□□□□ 0.19
USB1-208ENST00000563207 GTPBP2Q9BX10 602 aaKnown RBP16.21■□□□□ 0.19
USB1-208ENST00000563207 NUSAP1Q9BXS6 441 aaKnown RBP16.21■□□□□ 0.19
USB1-208ENST00000563207 NHEJ1Q9H9Q4 299 aaPredicted RBP16.21■□□□□ 0.19
USB1-208ENST00000563207 PARVAQ9NVD7 372 aa16.21■□□□□ 0.19
USB1-208ENST00000563207 TAS2R14Q9NYV8 317 aa16.21■□□□□ 0.19
USB1-208ENST00000563207 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.21■□□□□ 0.19
USB1-208ENST00000563207 TMEM59LQ9UK28 342 aa16.21■□□□□ 0.19
USB1-208ENST00000563207 STAP1Q9ULZ2 295 aa16.21■□□□□ 0.19
USB1-208ENST00000563207 NAALADL1Q9UQQ1 740 aa16.21■□□□□ 0.19
USB1-208ENST00000563207 TPRP12270 2363 aaKnown RBP16.21■□□□□ 0.19
USB1-208ENST00000563207 MAP1BP46821 2468 aaKnown RBP16.21■□□□□ 0.18
USB1-208ENST00000563207 ANKRD62A6NC57 917 aa16.2■□□□□ 0.18
USB1-208ENST00000563207 TMCO5BA8MYB1 307 aa16.2■□□□□ 0.18
USB1-208ENST00000563207 GOLGA8SH3BPF8 625 aa16.2■□□□□ 0.18
USB1-208ENST00000563207 KRT3P12035 628 aa16.2■□□□□ 0.18
USB1-208ENST00000563207 FECHP22830 423 aa16.2■□□□□ 0.18
USB1-208ENST00000563207 C2CD6Q53TS8 623 aa16.2■□□□□ 0.18
USB1-208ENST00000563207 SPDYCQ5MJ68 293 aa16.2■□□□□ 0.18
USB1-208ENST00000563207 CCDC122Q5T0U0 273 aa16.2■□□□□ 0.18
USB1-208ENST00000563207 SYPL2Q5VXT5 272 aa16.2■□□□□ 0.18
USB1-208ENST00000563207 DNAJC24Q6P3W2 148 aa16.2■□□□□ 0.18
USB1-208ENST00000563207 SLC36A4Q6YBV0 504 aa16.2■□□□□ 0.18
USB1-208ENST00000563207 ANKS1BQ7Z6G8 1248 aa16.2■□□□□ 0.18
USB1-208ENST00000563207 TMPRSS6Q8IU80 811 aa16.2■□□□□ 0.18
USB1-208ENST00000563207 UNC45BQ8IWX7 931 aa16.2■□□□□ 0.18
USB1-208ENST00000563207 DQX1Q8TE96 717 aaKnown RBP16.2■□□□□ 0.18
USB1-208ENST00000563207 ANP32BQ92688 251 aaKnown RBP16.2■□□□□ 0.18
USB1-208ENST00000563207 NT5C3BQ969T7 300 aa16.2■□□□□ 0.18
USB1-208ENST00000563207 PGAP3Q96FM1 320 aaPredicted RBP16.2■□□□□ 0.18
USB1-208ENST00000563207 CHP1Q99653 195 aa16.2■□□□□ 0.18
USB1-208ENST00000563207 SELENOOQ9BVL4 669 aa16.2■□□□□ 0.18
USB1-208ENST00000563207 MTG2Q9H4K7 406 aa16.2■□□□□ 0.18
USB1-208ENST00000563207 PRDM16Q9HAZ2 1276 aa16.2■□□□□ 0.18
USB1-208ENST00000563207 CAPN10Q9HC96 672 aa16.2■□□□□ 0.18
USB1-208ENST00000563207 MRPL47Q9HD33 250 aaKnown RBP16.2■□□□□ 0.18
USB1-208ENST00000563207 ANGPTL2Q9UKU9 493 aa16.2■□□□□ 0.18
USB1-208ENST00000563207 WASF3Q9UPY6 502 aa16.2■□□□□ 0.18
USB1-208ENST00000563207 TLR6Q9Y2C9 796 aa16.2■□□□□ 0.18
USB1-208ENST00000563207 SCINQ9Y6U3 715 aa16.2■□□□□ 0.18
USB1-208ENST00000563207 EPG5Q9HCE0 2579 aa16.2■□□□□ 0.18
USB1-208ENST00000563207 TCRBV5S1A1TA0A578 114 aa16.19■□□□□ 0.18
USB1-208ENST00000563207 ZNF217O75362 1048 aa16.19■□□□□ 0.18
USB1-208ENST00000563207 GRAP2O75791 330 aa16.19■□□□□ 0.18
USB1-208ENST00000563207 LATS1O95835 1130 aa16.19■□□□□ 0.18
USB1-208ENST00000563207 TRUB2O95900 331 aaKnown RBP16.19■□□□□ 0.18
USB1-208ENST00000563207 F9P00740 461 aa16.19■□□□□ 0.18
USB1-208ENST00000563207 IGLV3-25P01717 112 aa16.19■□□□□ 0.18
USB1-208ENST00000563207 CYBBP04839 570 aa16.19■□□□□ 0.18
USB1-208ENST00000563207 SLC2A3P11169 496 aa16.19■□□□□ 0.18
USB1-208ENST00000563207 RRM1P23921 792 aa16.19■□□□□ 0.18
USB1-208ENST00000563207 HARS2P49590 506 aaKnown RBP16.19■□□□□ 0.18
USB1-208ENST00000563207 TPMTP51580 245 aa16.19■□□□□ 0.18
USB1-208ENST00000563207 RNASE9P60153 205 aaKnown RBP16.19■□□□□ 0.18
USB1-208ENST00000563207 FAM193AP78312 1265 aa16.19■□□□□ 0.18
USB1-208ENST00000563207 ZNF252P-AS1Q0IIN9 211 aa16.19■□□□□ 0.18
USB1-208ENST00000563207 FOXC1Q12948 553 aa16.19■□□□□ 0.18
USB1-208ENST00000563207 DUOXA1Q1HG43 343 aa16.19■□□□□ 0.18
USB1-208ENST00000563207 SLC25A52Q3SY17 297 aa16.19■□□□□ 0.18
USB1-208ENST00000563207 MPPE1Q53F39 396 aa16.19■□□□□ 0.18
USB1-208ENST00000563207 FAM133BQ5BKY9 247 aaKnown RBP16.19■□□□□ 0.18
USB1-208ENST00000563207 NUGGCQ68CJ6 796 aa16.19■□□□□ 0.18
USB1-208ENST00000563207 NADSYN1Q6IA69 706 aa16.19■□□□□ 0.18
USB1-208ENST00000563207 PLEKHA7Q6IQ23 1121 aa16.19■□□□□ 0.18
USB1-208ENST00000563207 ADIPOR2Q86V24 386 aa16.19■□□□□ 0.18
USB1-208ENST00000563207 SPC24Q8NBT2 197 aa16.19■□□□□ 0.18
USB1-208ENST00000563207 ADAM32Q8TC27 787 aa16.19■□□□□ 0.18
USB1-208ENST00000563207 AZIN2Q96A70 460 aa16.19■□□□□ 0.18
USB1-208ENST00000563207 TMA16Q96EY4 203 aaKnown RBP16.19■□□□□ 0.18
USB1-208ENST00000563207 TOE1Q96GM8 510 aaKnown RBP16.19■□□□□ 0.18
USB1-208ENST00000563207 ZNF419Q96HQ0 510 aaPredicted RBP16.19■□□□□ 0.18
USB1-208ENST00000563207 GPR174Q9BXC1 333 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms