RNA–Protein interactions for RNA: ENST00000560051.1

HMGB3P26-201, Transcript of high mobility group box 3 pseudogene 26, humanhuman

BASIC

Gene HMGB3P26, Length 582 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P26-201ENST00000560051 FBXW8Q8N3Y1 598 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 EFHBQ8N7U6 833 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 C2orf69Q8N8R5 385 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 IQUBQ8NA54 791 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 ATG16L2Q8NAA4 619 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 POMGNT2Q8NAT1 580 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 ATAD1Q8NBU5 361 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 SETD9Q8NE22 299 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 BBS1Q8NFJ9 593 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 LINS1Q8NG48 757 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 ZNF461Q8TAF7 563 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 SMARCC2Q8TAQ2 1214 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 MYCBPAPQ8TBZ2 947 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 GANCQ8TET4 914 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 PAQR8Q8TEZ7 354 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 TSPEARQ8WU66 669 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 SCFD1Q8WVM8 642 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 ST8SIA4Q92187 359 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 PTPRN2Q92932 1015 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 RAB7BQ96AH8 199 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 SLC22A18Q96BI1 424 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 PHF21BQ96EK2 531 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 FAM120BQ96EK7 910 aaKnown RBP4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 HMCESQ96FZ2 354 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 MED30Q96HR3 178 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 CDK5RAP1Q96SZ6 601 aaKnown RBP4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 MMS19Q96T76 1030 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 KCNJ15Q99712 375 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 KCNS3Q9BQ31 491 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 LLPHQ9BRT6 129 aaKnown RBP4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 MLPHQ9BV36 600 aaPredicted RBP4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 NUP85Q9BW27 656 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 TEX12Q9BXU0 123 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 ZNF341Q9BYN7 854 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 PAIP1Q9H074 479 aaKnown RBP4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 EXO5Q9H790 373 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 WDR26Q9H7D7 661 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 CNTD2Q9H8S5 307 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 TMEM8AQ9HCN3 771 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 PNPLA8Q9NP80 782 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 IL26Q9NPH9 171 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 CACNA2D2Q9NY47 1150 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 TAB2Q9NYJ8 693 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 TAS2R7Q9NYW3 318 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 COQ3Q9NZJ6 369 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 LRFN1Q9P244 771 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 STX18Q9P2W9 335 aaKnown RBP4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 CRNNQ9UBG3 495 aaPredicted RBP4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 SLC7A8Q9UHI5 535 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 BAIAP2L1Q9UHR4 511 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 TMEM59LQ9UK28 342 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 PCDHGB4Q9UN71 923 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 CYP8B1Q9UNU6 501 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 ATP23Q9Y6H3 246 aa4.65□□□□□ -1.67
HMGB3P26-201ENST00000560051 TRIM43BA6NCK2 446 aa4.64□□□□□ -1.67
HMGB3P26-201ENST00000560051 C5orf51A6NDU8 294 aa4.64□□□□□ -1.67
HMGB3P26-201ENST00000560051 FAM47DPA6NHR8 397 aa4.64□□□□□ -1.67
HMGB3P26-201ENST00000560051 PRR33A8MZF0 331 aa4.64□□□□□ -1.67
HMGB3P26-201ENST00000560051 CHURC1-FNTBB4DL54 471 aa4.64□□□□□ -1.67
HMGB3P26-201ENST00000560051 SH2B2O14492 632 aaPredicted RBP4.64□□□□□ -1.67
HMGB3P26-201ENST00000560051 DVL2O14641 736 aa4.64□□□□□ -1.67
HMGB3P26-201ENST00000560051 TNFRSF10CO14798 259 aa4.64□□□□□ -1.67
HMGB3P26-201ENST00000560051 IFIT3O14879 490 aaKnown RBP4.64□□□□□ -1.67
HMGB3P26-201ENST00000560051 TBC1D4O60343 1298 aa4.64□□□□□ -1.67
HMGB3P26-201ENST00000560051 GAS7O60861 476 aa4.64□□□□□ -1.67
HMGB3P26-201ENST00000560051 DNAJA2O60884 412 aa4.64□□□□□ -1.67
HMGB3P26-201ENST00000560051 DTNBO60941 627 aa4.64□□□□□ -1.67
HMGB3P26-201ENST00000560051 TRIM3O75382 744 aaPredicted RBP4.64□□□□□ -1.67
HMGB3P26-201ENST00000560051 BCAS2O75934 225 aaPredicted RBP4.64□□□□□ -1.67
HMGB3P26-201ENST00000560051 MYO1DO94832 1006 aa4.64□□□□□ -1.67
HMGB3P26-201ENST00000560051 HTR3BO95264 441 aa4.64□□□□□ -1.67
HMGB3P26-201ENST00000560051 CCNDBP1O95273 360 aa4.64□□□□□ -1.67
HMGB3P26-201ENST00000560051 GSNP06396 782 aa4.64□□□□□ -1.67
HMGB3P26-201ENST00000560051 RPS17P08708 135 aaKnown RBP4.64□□□□□ -1.67
HMGB3P26-201ENST00000560051 PRR35P0CG20 571 aa4.64□□□□□ -1.67
HMGB3P26-201ENST00000560051 STAG3L3P0CL85 134 aa4.64□□□□□ -1.67
HMGB3P26-201ENST00000560051 CALM1P0DP23 149 aa4.64□□□□□ -1.67
HMGB3P26-201ENST00000560051 CALM2P0DP24 149 aa4.64□□□□□ -1.67
HMGB3P26-201ENST00000560051 CALM3P0DP25 149 aa4.64□□□□□ -1.67
HMGB3P26-201ENST00000560051 RALBP11234 206 aa4.64□□□□□ -1.67
HMGB3P26-201ENST00000560051 ATP2A2P16615 1042 aaKnown RBP4.64□□□□□ -1.67
HMGB3P26-201ENST00000560051 BMP7P18075 431 aa4.64□□□□□ -1.67
HMGB3P26-201ENST00000560051 RXRAP19793 462 aa4.64□□□□□ -1.67
HMGB3P26-201ENST00000560051 HOXA5P20719 270 aa4.64□□□□□ -1.67
HMGB3P26-201ENST00000560051 TLX1P31314 330 aaPredicted RBP4.64□□□□□ -1.67
HMGB3P26-201ENST00000560051 CCR1P32246 355 aa4.64□□□□□ -1.67
HMGB3P26-201ENST00000560051 GBP1P32455 592 aa4.64□□□□□ -1.67
HMGB3P26-201ENST00000560051 NTF4P34130 210 aa4.64□□□□□ -1.67
HMGB3P26-201ENST00000560051 PCGF2P35227 344 aa4.64□□□□□ -1.67
HMGB3P26-201ENST00000560051 IL12RB1P42701 662 aa4.64□□□□□ -1.67
HMGB3P26-201ENST00000560051 ALDH9A1P49189 494 aa4.64□□□□□ -1.67
HMGB3P26-201ENST00000560051 LMAN1P49257 510 aa4.64□□□□□ -1.67
HMGB3P26-201ENST00000560051 GATMP50440 423 aa4.64□□□□□ -1.67
HMGB3P26-201ENST00000560051 CCR9P51686 369 aa4.64□□□□□ -1.67
HMGB3P26-201ENST00000560051 ITGA8P53708 1063 aa4.64□□□□□ -1.67
HMGB3P26-201ENST00000560051 ADKP55263 362 aaKnown RBP4.64□□□□□ -1.67
HMGB3P26-201ENST00000560051 HNRNPH2P55795 449 aaKnown RBP4.64□□□□□ -1.67
HMGB3P26-201ENST00000560051 YBEYP58557 167 aaPredicted RBP4.64□□□□□ -1.67
HMGB3P26-201ENST00000560051 ZNF445P59923 1031 aa4.64□□□□□ -1.67
HMGB3P26-201ENST00000560051 ERVFC1P60507 584 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms