RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 TMC7Q7Z402 723 aa14.16□□□□□ -0.14
TPM1-215ENST00000558868 CCDC13Q8IYE1 715 aa14.16□□□□□ -0.14
TPM1-215ENST00000558868 RTL3Q8N8U3 475 aaKnown RBP14.16□□□□□ -0.14
TPM1-215ENST00000558868 OR2W6PQ8NHA6 318 aa14.16□□□□□ -0.14
TPM1-215ENST00000558868 FAM76AQ8TAV0 307 aa14.16□□□□□ -0.14
TPM1-215ENST00000558868 AUTS2Q8WXX7 1259 aa14.16□□□□□ -0.14
TPM1-215ENST00000558868 PSMG2Q969U7 264 aa14.16□□□□□ -0.14
TPM1-215ENST00000558868 AZIN2Q96A70 460 aa14.16□□□□□ -0.14
TPM1-215ENST00000558868 TSGA13Q96PP4 275 aa14.16□□□□□ -0.14
TPM1-215ENST00000558868 ZYG11BQ9C0D3 744 aa14.16□□□□□ -0.14
TPM1-215ENST00000558868 CCSER2Q9H7U1 834 aa14.16□□□□□ -0.14
TPM1-215ENST00000558868 PPCSQ9HAB8 311 aa14.16□□□□□ -0.14
TPM1-215ENST00000558868 ETNK1Q9HBU6 452 aa14.16□□□□□ -0.14
TPM1-215ENST00000558868 XAB2Q9HCS7 855 aaKnown RBP14.16□□□□□ -0.14
TPM1-215ENST00000558868 EIF2B3Q9NR50 452 aaKnown RBP14.16□□□□□ -0.14
TPM1-215ENST00000558868 DNAJC17Q9NVM6 304 aaKnown RBP14.16□□□□□ -0.14
TPM1-215ENST00000558868 CXXC1Q9P0U4 656 aaPredicted RBP14.16□□□□□ -0.14
TPM1-215ENST00000558868 SEPT10Q9P0V9 454 aa14.16□□□□□ -0.14
TPM1-215ENST00000558868 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.15□□□□□ -0.14
TPM1-215ENST00000558868 TCEA3O75764 348 aa14.15□□□□□ -0.14
TPM1-215ENST00000558868 ACSL3O95573 720 aa14.15□□□□□ -0.14
TPM1-215ENST00000558868 C1RP00736 705 aa14.15□□□□□ -0.14
TPM1-215ENST00000558868 CNPP09543 421 aaKnown RBP14.15□□□□□ -0.14
TPM1-215ENST00000558868 CCNCP24863 283 aa14.15□□□□□ -0.14
TPM1-215ENST00000558868 CTNNB1P35222 781 aa14.15□□□□□ -0.14
TPM1-215ENST00000558868 NDST2P52849 883 aa14.15□□□□□ -0.14
TPM1-215ENST00000558868 GABPB1Q06547 395 aaPredicted RBP14.15□□□□□ -0.14
TPM1-215ENST00000558868 AUHQ13825 339 aaKnown RBP14.15□□□□□ -0.14
TPM1-215ENST00000558868 PIK3R6Q5UE93 754 aa14.15□□□□□ -0.14
TPM1-215ENST00000558868 TIGD7Q6NT04 549 aaPredicted RBP14.15□□□□□ -0.14
TPM1-215ENST00000558868 DNAJB7Q7Z6W7 309 aaPredicted RBP14.15□□□□□ -0.14
TPM1-215ENST00000558868 ZBED8Q8IZ13 594 aa14.15□□□□□ -0.14
TPM1-215ENST00000558868 ELMOD1Q8N336 334 aa14.15□□□□□ -0.14
TPM1-215ENST00000558868 TAB3Q8N5C8 712 aaPredicted RBP14.15□□□□□ -0.14
TPM1-215ENST00000558868 ATPAF2Q8N5M1 289 aa14.15□□□□□ -0.14
TPM1-215ENST00000558868 NPWQ8N729 165 aa14.15□□□□□ -0.14
TPM1-215ENST00000558868 ATP11CQ8NB49 1132 aa14.15□□□□□ -0.14
TPM1-215ENST00000558868 PYROXD1Q8WU10 500 aa14.15□□□□□ -0.14
TPM1-215ENST00000558868 ARL8AQ96BM9 186 aa14.15□□□□□ -0.14
TPM1-215ENST00000558868 LRRC39Q96DD0 335 aa14.15□□□□□ -0.14
TPM1-215ENST00000558868 PPP1R2P1Q96PQ5 205 aa14.15□□□□□ -0.14
TPM1-215ENST00000558868 DDX50Q9BQ39 737 aaKnown RBP14.15□□□□□ -0.14
TPM1-215ENST00000558868 KLHL8Q9P2G9 620 aaPredicted RBP14.15□□□□□ -0.14
TPM1-215ENST00000558868 IGSF9Q9P2J2 1179 aa14.15□□□□□ -0.14
TPM1-215ENST00000558868 NEU3Q9UQ49 428 aa14.15□□□□□ -0.14
TPM1-215ENST00000558868 IRAK3Q9Y616 596 aa14.15□□□□□ -0.14
TPM1-215ENST00000558868 ALPK3Q96L96 1907 aa14.15□□□□□ -0.14
TPM1-215ENST00000558868 IGLV3-10A0A075B6K4 115 aa14.14□□□□□ -0.15
TPM1-215ENST00000558868 DRGXA6NNA5 263 aa14.14□□□□□ -0.15
TPM1-215ENST00000558868 GOLGA8MH3BSY2 632 aa14.14□□□□□ -0.15
TPM1-215ENST00000558868 RASGRF2O14827 1237 aa14.14□□□□□ -0.15
TPM1-215ENST00000558868 RGS16O15492 202 aaPredicted RBP14.14□□□□□ -0.15
TPM1-215ENST00000558868 PSMD3O43242 534 aa14.14□□□□□ -0.15
TPM1-215ENST00000558868 SPAG6O75602 509 aa14.14□□□□□ -0.15
TPM1-215ENST00000558868 TMEM63AO94886 807 aa14.14□□□□□ -0.15
TPM1-215ENST00000558868 METTL18O95568 372 aa14.14□□□□□ -0.15
TPM1-215ENST00000558868 LRG1P02750 347 aa14.14□□□□□ -0.15
TPM1-215ENST00000558868 RB1P06400 928 aa14.14□□□□□ -0.15
TPM1-215ENST00000558868 APRTP07741 180 aa14.14□□□□□ -0.15
TPM1-215ENST00000558868 HMBSP08397 361 aa14.14□□□□□ -0.15
TPM1-215ENST00000558868 ATP5DP30049 168 aa14.14□□□□□ -0.15
TPM1-215ENST00000558868 NRLP54845 237 aa14.14□□□□□ -0.15
TPM1-215ENST00000558868 WASHC5Q12768 1159 aa14.14□□□□□ -0.15
TPM1-215ENST00000558868 BBS9Q3SYG4 887 aa14.14□□□□□ -0.15
TPM1-215ENST00000558868 CCDC38Q502W7 563 aa14.14□□□□□ -0.15
TPM1-215ENST00000558868 TTMPQ5BVD1 217 aa14.14□□□□□ -0.15
TPM1-215ENST00000558868 AFMIDQ63HM1 303 aa14.14□□□□□ -0.15
TPM1-215ENST00000558868 PID1Q7Z2X4 250 aa14.14□□□□□ -0.15
TPM1-215ENST00000558868 C14orf80Q86SX3 495 aa14.14□□□□□ -0.15
TPM1-215ENST00000558868 CHSY1Q86X52 802 aa14.14□□□□□ -0.15
TPM1-215ENST00000558868 ZNF683Q8IZ20 524 aa14.14□□□□□ -0.15
TPM1-215ENST00000558868 UMODL1-AS1Q8N2C9 162 aa14.14□□□□□ -0.15
TPM1-215ENST00000558868 CCDC33Q8N5R6 958 aa14.14□□□□□ -0.15
TPM1-215ENST00000558868 ARFGAP2Q8N6H7 521 aa14.14□□□□□ -0.15
TPM1-215ENST00000558868 PGM2Q96G03 612 aa14.14□□□□□ -0.15
TPM1-215ENST00000558868 C9orf72Q96LT7 481 aa14.14□□□□□ -0.15
TPM1-215ENST00000558868 PWWP2AQ96N64 755 aa14.14□□□□□ -0.15
TPM1-215ENST00000558868 SERPINB12Q96P63 405 aa14.14□□□□□ -0.15
TPM1-215ENST00000558868 KLHL5Q96PQ7 755 aa14.14□□□□□ -0.15
TPM1-215ENST00000558868 CENPHQ9H3R5 247 aa14.14□□□□□ -0.15
TPM1-215ENST00000558868 ENTPD7Q9NQZ7 604 aa14.14□□□□□ -0.15
TPM1-215ENST00000558868 TMEM248Q9NWD8 314 aa14.14□□□□□ -0.15
TPM1-215ENST00000558868 VANGL2Q9ULK5 521 aa14.14□□□□□ -0.15
TPM1-215ENST00000558868 ZMYND8Q9ULU4 1186 aaPredicted RBP14.14□□□□□ -0.15
TPM1-215ENST00000558868 TCRBV7S3A2A0A539 114 aa14.13□□□□□ -0.15
TPM1-215ENST00000558868 ARHGAP42A6NI28 874 aa14.13□□□□□ -0.15
TPM1-215ENST00000558868 A6NNZ2 444 aa14.13□□□□□ -0.15
TPM1-215ENST00000558868 ERI2A8K979 691 aaKnown RBP14.13□□□□□ -0.15
TPM1-215ENST00000558868 F5H5T6 163 aa14.13□□□□□ -0.15
TPM1-215ENST00000558868 DFFAO00273 331 aa14.13□□□□□ -0.15
TPM1-215ENST00000558868 COCHO43405 550 aa14.13□□□□□ -0.15
TPM1-215ENST00000558868 TGM5O43548 720 aa14.13□□□□□ -0.15
TPM1-215ENST00000558868 ACSL4O60488 711 aa14.13□□□□□ -0.15
TPM1-215ENST00000558868 LATS1O95835 1130 aa14.13□□□□□ -0.15
TPM1-215ENST00000558868 SHBGP04278 402 aa14.13□□□□□ -0.15
TPM1-215ENST00000558868 GSTA2P09210 222 aa14.13□□□□□ -0.15
TPM1-215ENST00000558868 MLNP12872 115 aa14.13□□□□□ -0.15
TPM1-215ENST00000558868 PTPN3P26045 913 aa14.13□□□□□ -0.15
TPM1-215ENST00000558868 MAPKAPK2P49137 400 aa14.13□□□□□ -0.15
TPM1-215ENST00000558868 PRPSAP1Q14558 356 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms