RNA–Protein interactions for RNA: ENST00000553300.5

HNRNPC-205, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-205ENST00000553300 PLEKHG6Q3KR16 790 aa13.58□□□□□ -0.24
HNRNPC-205ENST00000553300 C5orf22Q49AR2 442 aa13.58□□□□□ -0.24
HNRNPC-205ENST00000553300 FILIP1LQ4L180 1135 aa13.58□□□□□ -0.24
HNRNPC-205ENST00000553300 TRIM61Q5EBN2 209 aa13.58□□□□□ -0.24
HNRNPC-205ENST00000553300 FSCBQ5H9T9 825 aa13.58□□□□□ -0.24
HNRNPC-205ENST00000553300 PITRM1Q5JRX3 1037 aa13.58□□□□□ -0.24
HNRNPC-205ENST00000553300 NAA35Q5VZE5 725 aa13.58□□□□□ -0.24
HNRNPC-205ENST00000553300 RNF219Q5W0B1 726 aaPredicted RBP13.58□□□□□ -0.24
HNRNPC-205ENST00000553300 CAVIN1Q6NZI2 390 aaKnown RBP13.58□□□□□ -0.24
HNRNPC-205ENST00000553300 FBXL22Q6P050 247 aa13.58□□□□□ -0.24
HNRNPC-205ENST00000553300 ARMCX6Q7L4S7 300 aa13.58□□□□□ -0.24
HNRNPC-205ENST00000553300 CCAR2Q8N163 923 aaKnown RBP13.58□□□□□ -0.24
HNRNPC-205ENST00000553300 ERLEC1Q96DZ1 483 aa13.58□□□□□ -0.24
HNRNPC-205ENST00000553300 TOE1Q96GM8 510 aaKnown RBP13.58□□□□□ -0.24
HNRNPC-205ENST00000553300 C1orf74Q96LT6 269 aa13.58□□□□□ -0.24
HNRNPC-205ENST00000553300 EDEM2Q9BV94 578 aa13.58□□□□□ -0.24
HNRNPC-205ENST00000553300 PCED1AQ9H1Q7 454 aa13.58□□□□□ -0.24
HNRNPC-205ENST00000553300 SLC6A17Q9H1V8 727 aa13.58□□□□□ -0.24
HNRNPC-205ENST00000553300 PIGVQ9NUD9 493 aa13.58□□□□□ -0.24
HNRNPC-205ENST00000553300 ARHGEF38Q9NXL2 777 aa13.58□□□□□ -0.24
HNRNPC-205ENST00000553300 SUSD2Q9UGT4 822 aa13.58□□□□□ -0.24
HNRNPC-205ENST00000553300 TMEM59LQ9UK28 342 aa13.58□□□□□ -0.24
HNRNPC-205ENST00000553300 INTS6Q9UL03 887 aaKnown RBP13.58□□□□□ -0.24
HNRNPC-205ENST00000553300 SCML1Q9UN30 329 aa13.58□□□□□ -0.24
HNRNPC-205ENST00000553300 TNRC6BQ9UPQ9 1833 aaKnown RBP13.57□□□□□ -0.24
HNRNPC-205ENST00000553300 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.57□□□□□ -0.24
HNRNPC-205ENST00000553300 TARSL2A2RTX5 802 aaKnown RBP13.57□□□□□ -0.24
HNRNPC-205ENST00000553300 DCDC2BA2VCK2 349 aa13.57□□□□□ -0.24
HNRNPC-205ENST00000553300 RNASEH1O60930 286 aaKnown RBP13.57□□□□□ -0.24
HNRNPC-205ENST00000553300 DNTTP04053 509 aa13.57□□□□□ -0.24
HNRNPC-205ENST00000553300 ATP1A3P13637 1013 aa13.57□□□□□ -0.24
HNRNPC-205ENST00000553300 GNSP15586 552 aa13.57□□□□□ -0.24
HNRNPC-205ENST00000553300 ITPKAP23677 461 aa13.57□□□□□ -0.24
HNRNPC-205ENST00000553300 ZNF165P49910 485 aa13.57□□□□□ -0.24
HNRNPC-205ENST00000553300 IRX4P78413 519 aa13.57□□□□□ -0.24
HNRNPC-205ENST00000553300 ECT2LQ008S8 904 aa13.57□□□□□ -0.24
HNRNPC-205ENST00000553300 DEUP1Q05D60 604 aa13.57□□□□□ -0.24
HNRNPC-205ENST00000553300 ZNF177Q13360 481 aaPredicted RBP13.57□□□□□ -0.24
HNRNPC-205ENST00000553300 HNRNPA1L2Q32P51 320 aaKnown RBP13.57□□□□□ -0.24
HNRNPC-205ENST00000553300 DAB2IPQ5VWQ8 1189 aa13.57□□□□□ -0.24
HNRNPC-205ENST00000553300 TCEAL6Q6IPX3 200 aa13.57□□□□□ -0.24
HNRNPC-205ENST00000553300 LRRC31Q6UY01 552 aa13.57□□□□□ -0.24
HNRNPC-205ENST00000553300 SLC20A1Q8WUM9 679 aa13.57□□□□□ -0.24
HNRNPC-205ENST00000553300 TCEAL3Q969E4 200 aa13.57□□□□□ -0.24
HNRNPC-205ENST00000553300 HSPA12BQ96MM6 686 aa13.57□□□□□ -0.24
HNRNPC-205ENST00000553300 TKTL2Q9H0I9 626 aa13.57□□□□□ -0.24
HNRNPC-205ENST00000553300 TMEM9BQ9NQ34 198 aa13.57□□□□□ -0.24
HNRNPC-205ENST00000553300 PRSS16Q9NQE7 514 aa13.57□□□□□ -0.24
HNRNPC-205ENST00000553300 RXFP3Q9NSD7 469 aa13.57□□□□□ -0.24
HNRNPC-205ENST00000553300 TMEM74BQ9NUR3 256 aa13.57□□□□□ -0.24
HNRNPC-205ENST00000553300 VANGL2Q9ULK5 521 aa13.57□□□□□ -0.24
HNRNPC-205ENST00000553300 MYO6Q9UM54 1294 aa13.57□□□□□ -0.24
HNRNPC-205ENST00000553300 SLC6A14Q9UN76 642 aa13.57□□□□□ -0.24
HNRNPC-205ENST00000553300 ERVW-1Q9UQF0 538 aa13.57□□□□□ -0.24
HNRNPC-205ENST00000553300 HS3ST4Q9Y661 456 aa13.57□□□□□ -0.24
HNRNPC-205ENST00000553300 PATE3B3GLJ2 98 aa13.56□□□□□ -0.24
HNRNPC-205ENST00000553300 GOLGA8SH3BPF8 625 aa13.56□□□□□ -0.24
HNRNPC-205ENST00000553300 TM4SF5O14894 197 aa13.56□□□□□ -0.24
HNRNPC-205ENST00000553300 ADCY5O95622 1261 aa13.56□□□□□ -0.24
HNRNPC-205ENST00000553300 SERPINF2P08697 491 aa13.56□□□□□ -0.24
HNRNPC-205ENST00000553300 UNGP13051 313 aaPredicted RBP13.56□□□□□ -0.24
HNRNPC-205ENST00000553300 CHRNB2P17787 502 aa13.56□□□□□ -0.24
HNRNPC-205ENST00000553300 FLT3P36888 993 aa13.56□□□□□ -0.24
HNRNPC-205ENST00000553300 NSFP46459 744 aaKnown RBP13.56□□□□□ -0.24
HNRNPC-205ENST00000553300 VASPP50552 380 aaPredicted RBP13.56□□□□□ -0.24
HNRNPC-205ENST00000553300 CDH4P55283 916 aa13.56□□□□□ -0.24
HNRNPC-205ENST00000553300 CENPCQ03188 943 aa13.56□□□□□ -0.24
HNRNPC-205ENST00000553300 KLHL40Q2TBA0 621 aa13.56□□□□□ -0.24
HNRNPC-205ENST00000553300 TTC31Q49AM3 519 aaPredicted RBP13.56□□□□□ -0.24
HNRNPC-205ENST00000553300 OTUD1Q5VV17 481 aaPredicted RBP13.56□□□□□ -0.24
HNRNPC-205ENST00000553300 PPP1R2P3Q6NXS1 205 aa13.56□□□□□ -0.24
HNRNPC-205ENST00000553300 MMS22LQ6ZRQ5 1243 aa13.56□□□□□ -0.24
HNRNPC-205ENST00000553300 SLC41A1Q8IVJ1 513 aa13.56□□□□□ -0.24
HNRNPC-205ENST00000553300 DHX40Q8IX18 779 aaKnown RBP13.56□□□□□ -0.24
HNRNPC-205ENST00000553300 RGL4Q8IZJ4 473 aa13.56□□□□□ -0.24
HNRNPC-205ENST00000553300 MYO19Q96H55 970 aa13.56□□□□□ -0.24
HNRNPC-205ENST00000553300 MRGPRX3Q96LB0 322 aa13.56□□□□□ -0.24
HNRNPC-205ENST00000553300 HAPLN3Q96S86 360 aa13.56□□□□□ -0.24
HNRNPC-205ENST00000553300 TBCBQ99426 244 aa13.56□□□□□ -0.24
HNRNPC-205ENST00000553300 SIK2Q9H0K1 926 aa13.56□□□□□ -0.24
HNRNPC-205ENST00000553300 RSPH9Q9H1X1 276 aaPredicted RBP13.56□□□□□ -0.24
HNRNPC-205ENST00000553300 RTN4Q9NQC3 1192 aaKnown RBP13.56□□□□□ -0.24
HNRNPC-205ENST00000553300 MUC22E2RYF6 1773 aaPredicted RBP13.55□□□□□ -0.24
HNRNPC-205ENST00000553300 ITIH6Q6UXX5 1313 aa13.55□□□□□ -0.24
HNRNPC-205ENST00000553300 NCOR2Q9Y618 2525 aa13.55□□□□□ -0.24
HNRNPC-205ENST00000553300 EDDM13A0A1B0GTR0 161 aa13.55□□□□□ -0.24
HNRNPC-205ENST00000553300 ENDOD1O94919 500 aa13.55□□□□□ -0.24
HNRNPC-205ENST00000553300 CALB1P05937 261 aa13.55□□□□□ -0.24
HNRNPC-205ENST00000553300 PDGFRAP16234 1089 aa13.55□□□□□ -0.24
HNRNPC-205ENST00000553300 FERP16591 822 aa13.55□□□□□ -0.24
HNRNPC-205ENST00000553300 RDXP35241 583 aaKnown RBP13.55□□□□□ -0.24
HNRNPC-205ENST00000553300 GSCP56915 257 aaPredicted RBP13.55□□□□□ -0.24
HNRNPC-205ENST00000553300 RPS14P62263 151 aaKnown RBP13.55□□□□□ -0.24
HNRNPC-205ENST00000553300 GFPT1Q06210 699 aaPredicted RBP13.55□□□□□ -0.24
HNRNPC-205ENST00000553300 ARL13BQ3SXY8 428 aa13.55□□□□□ -0.24
HNRNPC-205ENST00000553300 C2CD6Q53TS8 623 aa13.55□□□□□ -0.24
HNRNPC-205ENST00000553300 ZNF776Q68DI1 518 aaPredicted RBP13.55□□□□□ -0.24
HNRNPC-205ENST00000553300 LRSAM1Q6UWE0 723 aa13.55□□□□□ -0.24
HNRNPC-205ENST00000553300 USP30Q70CQ3 517 aa13.55□□□□□ -0.24
HNRNPC-205ENST00000553300 BNIPLQ7Z465 357 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms