RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 COMMD8Q9NX08 183 aa7.13□□□□□ -1.27
PRPF40B-214ENST00000551320 TSPAN16Q9UKR8 245 aa7.13□□□□□ -1.27
PRPF40B-214ENST00000551320 ANKRD6Q9Y2G4 727 aa7.13□□□□□ -1.27
PRPF40B-214ENST00000551320 PCDHA5Q9Y5H7 936 aa7.13□□□□□ -1.27
PRPF40B-214ENST00000551320 DOCK9Q9BZ29 2069 aa7.12□□□□□ -1.27
PRPF40B-214ENST00000551320 UPK3BL1B0FP48 263 aa7.12□□□□□ -1.27
PRPF40B-214ENST00000551320 UPK3BL2E5RIL1 263 aa7.12□□□□□ -1.27
PRPF40B-214ENST00000551320 IKBKBO14920 756 aa7.12□□□□□ -1.27
PRPF40B-214ENST00000551320 MID1O15344 667 aa7.12□□□□□ -1.27
PRPF40B-214ENST00000551320 SIN3BO75182 1162 aa7.12□□□□□ -1.27
PRPF40B-214ENST00000551320 SEMA4FO95754 770 aa7.12□□□□□ -1.27
PRPF40B-214ENST00000551320 MOCS2O96007 188 aaPredicted RBP7.12□□□□□ -1.27
PRPF40B-214ENST00000551320 IGHV4-34P06331 123 aa7.12□□□□□ -1.27
PRPF40B-214ENST00000551320 GNSP15586 552 aa7.12□□□□□ -1.27
PRPF40B-214ENST00000551320 CMA1P23946 247 aa7.12□□□□□ -1.27
PRPF40B-214ENST00000551320 SCNN1AP37088 669 aa7.12□□□□□ -1.27
PRPF40B-214ENST00000551320 PRCPP42785 496 aa7.12□□□□□ -1.27
PRPF40B-214ENST00000551320 SYKP43405 635 aa7.12□□□□□ -1.27
PRPF40B-214ENST00000551320 STK19P49842 368 aaPredicted RBP7.12□□□□□ -1.27
PRPF40B-214ENST00000551320 AP3M2P53677 418 aa7.12□□□□□ -1.27
PRPF40B-214ENST00000551320 PITX1P78337 314 aaPredicted RBP7.12□□□□□ -1.27
PRPF40B-214ENST00000551320 APBA1Q02410 837 aa7.12□□□□□ -1.27
PRPF40B-214ENST00000551320 GOLGA8FQ08AF8 430 aa7.12□□□□□ -1.27
PRPF40B-214ENST00000551320 GOLGA8DPQ0D2H9 430 aa7.12□□□□□ -1.27
PRPF40B-214ENST00000551320 ENPP2Q13822 863 aa7.12□□□□□ -1.27
PRPF40B-214ENST00000551320 KCNJ12Q14500 433 aa7.12□□□□□ -1.27
PRPF40B-214ENST00000551320 ZNF423Q2M1K9 1284 aa7.12□□□□□ -1.27
PRPF40B-214ENST00000551320 ZCWPW2Q504Y3 356 aa7.12□□□□□ -1.27
PRPF40B-214ENST00000551320 RAB41Q5JT25 222 aa7.12□□□□□ -1.27
PRPF40B-214ENST00000551320 SPDYCQ5MJ68 293 aa7.12□□□□□ -1.27
PRPF40B-214ENST00000551320 ANKRD40Q6AI12 368 aa7.12□□□□□ -1.27
PRPF40B-214ENST00000551320 PMF1Q6P1K2 205 aa7.12□□□□□ -1.27
PRPF40B-214ENST00000551320 CARNMT1Q8N4J0 409 aa7.12□□□□□ -1.27
PRPF40B-214ENST00000551320 KIAA1958Q8N8K9 716 aa7.12□□□□□ -1.27
PRPF40B-214ENST00000551320 ANKRD52Q8NB46 1076 aa7.12□□□□□ -1.27
PRPF40B-214ENST00000551320 PIP4K2CQ8TBX8 421 aa7.12□□□□□ -1.27
PRPF40B-214ENST00000551320 TAF4BQ92750 862 aa7.12□□□□□ -1.27
PRPF40B-214ENST00000551320 TMA16Q96EY4 203 aaKnown RBP7.12□□□□□ -1.27
PRPF40B-214ENST00000551320 RPL10LQ96L21 214 aaKnown RBP7.12□□□□□ -1.27
PRPF40B-214ENST00000551320 SPATA32Q96LK8 384 aa7.12□□□□□ -1.27
PRPF40B-214ENST00000551320 PRICKLE1Q96MT3 831 aaPredicted RBP7.12□□□□□ -1.27
PRPF40B-214ENST00000551320 MYOCQ99972 504 aa7.12□□□□□ -1.27
PRPF40B-214ENST00000551320 ORAI3Q9BRQ5 295 aa7.12□□□□□ -1.27
PRPF40B-214ENST00000551320 NUCKS1Q9H1E3 243 aaKnown RBP7.12□□□□□ -1.27
PRPF40B-214ENST00000551320 FAM124BQ9H5Z6 455 aaPredicted RBP7.12□□□□□ -1.27
PRPF40B-214ENST00000551320 MAGEF1Q9HAY2 307 aa7.12□□□□□ -1.27
PRPF40B-214ENST00000551320 TMEM8AQ9HCN3 771 aa7.12□□□□□ -1.27
PRPF40B-214ENST00000551320 RAB20Q9NX57 234 aa7.12□□□□□ -1.27
PRPF40B-214ENST00000551320 CGNQ9P2M7 1197 aaKnown RBP7.12□□□□□ -1.27
PRPF40B-214ENST00000551320 TJP2Q9UDY2 1190 aa7.12□□□□□ -1.27
PRPF40B-214ENST00000551320 SLCO3A1Q9UIG8 710 aa7.12□□□□□ -1.27
PRPF40B-214ENST00000551320 GGA2Q9UJY4 613 aa7.12□□□□□ -1.27
PRPF40B-214ENST00000551320 INTS6Q9UL03 887 aaKnown RBP7.12□□□□□ -1.27
PRPF40B-214ENST00000551320 TRAF3IP3Q9Y228 551 aa7.12□□□□□ -1.27
PRPF40B-214ENST00000551320 HPSEQ9Y251 543 aa7.12□□□□□ -1.27
PRPF40B-214ENST00000551320 SLC27A6Q9Y2P4 619 aa7.12□□□□□ -1.27
PRPF40B-214ENST00000551320 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.12□□□□□ -1.27
PRPF40B-214ENST00000551320 RAI2Q9Y5P3 530 aa7.12□□□□□ -1.27
PRPF40B-214ENST00000551320 CKAP5Q14008 2032 aa7.11□□□□□ -1.27
PRPF40B-214ENST00000551320 PLXNA2O75051 1894 aa7.11□□□□□ -1.27
PRPF40B-214ENST00000551320 KNTC1P50748 2209 aa7.11□□□□□ -1.27
PRPF40B-214ENST00000551320 SYNJ2BP-COX16A0A087WUM0 186 aa7.11□□□□□ -1.27
PRPF40B-214ENST00000551320 A0A1W2PP55 124 aa7.11□□□□□ -1.27
PRPF40B-214ENST00000551320 FAM221BA6H8Z2 402 aa7.11□□□□□ -1.27
PRPF40B-214ENST00000551320 TMEM8BA6NDV4 472 aa7.11□□□□□ -1.27
PRPF40B-214ENST00000551320 FIGNL2A6NMB9 653 aa7.11□□□□□ -1.27
PRPF40B-214ENST00000551320 RNF103O00237 685 aa7.11□□□□□ -1.27
PRPF40B-214ENST00000551320 GFRA2O00451 464 aa7.11□□□□□ -1.27
PRPF40B-214ENST00000551320 CASC3O15234 703 aaKnown RBP7.11□□□□□ -1.27
PRPF40B-214ENST00000551320 SDC3O75056 442 aa7.11□□□□□ -1.27
PRPF40B-214ENST00000551320 RHOBTB3O94955 611 aa7.11□□□□□ -1.27
PRPF40B-214ENST00000551320 CYBBP04839 570 aa7.11□□□□□ -1.27
PRPF40B-214ENST00000551320 PABPC1P11940 636 aaKnown RBP7.11□□□□□ -1.27
PRPF40B-214ENST00000551320 MAT2AP31153 395 aaKnown RBP7.11□□□□□ -1.27
PRPF40B-214ENST00000551320 HOXD12P35452 270 aa7.11□□□□□ -1.27
PRPF40B-214ENST00000551320 PSMC2P35998 433 aaKnown RBP7.11□□□□□ -1.27
PRPF40B-214ENST00000551320 EIF2S3P41091 472 aaKnown RBP7.11□□□□□ -1.27
PRPF40B-214ENST00000551320 PSMD8P48556 350 aa7.11□□□□□ -1.27
PRPF40B-214ENST00000551320 MXI1P50539 228 aa7.11□□□□□ -1.27
PRPF40B-214ENST00000551320 IRAK1P51617 712 aa7.11□□□□□ -1.27
PRPF40B-214ENST00000551320 COG7P83436 770 aa7.11□□□□□ -1.27
PRPF40B-214ENST00000551320 SEMG2Q02383 582 aa7.11□□□□□ -1.27
PRPF40B-214ENST00000551320 BNIP3Q12983 259 aa7.11□□□□□ -1.27
PRPF40B-214ENST00000551320 CAMK2GQ13555 558 aaPredicted RBP7.11□□□□□ -1.27
PRPF40B-214ENST00000551320 ACAP1Q15027 740 aa7.11□□□□□ -1.27
PRPF40B-214ENST00000551320 SHBQ15464 509 aa7.11□□□□□ -1.27
PRPF40B-214ENST00000551320 TAF5Q15542 800 aa7.11□□□□□ -1.27
PRPF40B-214ENST00000551320 TRIP4Q15650 581 aaPredicted RBP7.11□□□□□ -1.27
PRPF40B-214ENST00000551320 FAM133BQ5BKY9 247 aaKnown RBP7.11□□□□□ -1.27
PRPF40B-214ENST00000551320 KRT39Q6A163 491 aa7.11□□□□□ -1.27
PRPF40B-214ENST00000551320 PM20D1Q6GTS8 502 aa7.11□□□□□ -1.27
PRPF40B-214ENST00000551320 KLHDC10Q6PID8 442 aa7.11□□□□□ -1.27
PRPF40B-214ENST00000551320 NCEH1Q6PIU2 408 aa7.11□□□□□ -1.27
PRPF40B-214ENST00000551320 KDM7AQ6ZMT4 941 aa7.11□□□□□ -1.27
PRPF40B-214ENST00000551320 KRBA2Q6ZNG9 492 aa7.11□□□□□ -1.27
PRPF40B-214ENST00000551320 RRAGAQ7L523 313 aa7.11□□□□□ -1.27
PRPF40B-214ENST00000551320 MMAAQ8IVH4 418 aaKnown RBP7.11□□□□□ -1.27
PRPF40B-214ENST00000551320 ARHGEF19Q8IW93 802 aa7.11□□□□□ -1.27
PRPF40B-214ENST00000551320 HSCBQ8IWL3 235 aa7.11□□□□□ -1.27
PRPF40B-214ENST00000551320 APCDD1Q8J025 514 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms