RNA–Protein interactions for RNA: ENST00000522117.5

SPIDR-217, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 2,745 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-217ENST00000522117 SNAP23O00161 211 aa12.31□□□□□ -0.44
SPIDR-217ENST00000522117 LYPLA1O75608 230 aaPredicted RBP12.31□□□□□ -0.44
SPIDR-217ENST00000522117 TSPAN9O75954 239 aa12.31□□□□□ -0.44
SPIDR-217ENST00000522117 FGFR3P22607 806 aa12.31□□□□□ -0.44
SPIDR-217ENST00000522117 ATXN3P54252 364 aaPredicted RBP12.31□□□□□ -0.44
SPIDR-217ENST00000522117 TMBIM6P55061 237 aa12.31□□□□□ -0.44
SPIDR-217ENST00000522117 TBX4P57082 545 aa12.31□□□□□ -0.44
SPIDR-217ENST00000522117 RACK1P63244 317 aaKnown RBP12.31□□□□□ -0.44
SPIDR-217ENST00000522117 UBXN2AP68543 259 aa12.31□□□□□ -0.44
SPIDR-217ENST00000522117 CLCQ05315 142 aa12.31□□□□□ -0.44
SPIDR-217ENST00000522117 CEACAM7Q14002 265 aa12.31□□□□□ -0.44
SPIDR-217ENST00000522117 KCTD8Q6ZWB6 473 aa12.31□□□□□ -0.44
SPIDR-217ENST00000522117 AMIGO3Q86WK7 504 aa12.31□□□□□ -0.44
SPIDR-217ENST00000522117 SNX32Q86XE0 403 aa12.31□□□□□ -0.44
SPIDR-217ENST00000522117 ASCC1Q8N9N2 400 aaKnown RBP12.31□□□□□ -0.44
SPIDR-217ENST00000522117 PNMA1Q8ND90 353 aa12.31□□□□□ -0.44
SPIDR-217ENST00000522117 FBXO36Q8NEA4 188 aa12.31□□□□□ -0.44
SPIDR-217ENST00000522117 SLC44A1Q8WWI5 657 aa12.31□□□□□ -0.44
SPIDR-217ENST00000522117 TBC1D20Q96BZ9 403 aa12.31□□□□□ -0.44
SPIDR-217ENST00000522117 MAP6Q96JE9 813 aa12.31□□□□□ -0.44
SPIDR-217ENST00000522117 IL12RB2Q99665 862 aa12.31□□□□□ -0.44
SPIDR-217ENST00000522117 NAP1L4Q99733 375 aaKnown RBP12.31□□□□□ -0.44
SPIDR-217ENST00000522117 BRIP1Q9BX63 1249 aa12.31□□□□□ -0.44
SPIDR-217ENST00000522117 C6orf50Q9HD87 102 aa12.31□□□□□ -0.44
SPIDR-217ENST00000522117 HMGXB4Q9UGU5 601 aa12.31□□□□□ -0.44
SPIDR-217ENST00000522117 SERPINB13Q9UIV8 391 aa12.31□□□□□ -0.44
SPIDR-217ENST00000522117 MAST2Q6P0Q8 1798 aa12.31□□□□□ -0.44
SPIDR-217ENST00000522117 KATNA1O75449 491 aa12.31□□□□□ -0.44
SPIDR-217ENST00000522117 BCAS2O75934 225 aaPredicted RBP12.31□□□□□ -0.44
SPIDR-217ENST00000522117 BPGMP07738 259 aa12.31□□□□□ -0.44
SPIDR-217ENST00000522117 TRIM49P0CI25 452 aa12.31□□□□□ -0.44
SPIDR-217ENST00000522117 TRIM49CP0CI26 452 aa12.31□□□□□ -0.44
SPIDR-217ENST00000522117 BMP3P12645 472 aa12.31□□□□□ -0.44
SPIDR-217ENST00000522117 SSTR3P32745 418 aaPredicted RBP12.31□□□□□ -0.44
SPIDR-217ENST00000522117 DYNLL1P63167 89 aaKnown RBP12.31□□□□□ -0.44
SPIDR-217ENST00000522117 PUM3Q15397 648 aaKnown RBP12.31□□□□□ -0.44
SPIDR-217ENST00000522117 VPS72Q15906 364 aa12.31□□□□□ -0.44
SPIDR-217ENST00000522117 BMT2Q1RMZ1 405 aa12.31□□□□□ -0.44
SPIDR-217ENST00000522117 SLFN13Q68D06 897 aa12.31□□□□□ -0.44
SPIDR-217ENST00000522117 PRR23CQ6ZRP0 262 aa12.31□□□□□ -0.44
SPIDR-217ENST00000522117 OTOP3Q7RTS5 596 aa12.31□□□□□ -0.44
SPIDR-217ENST00000522117 SLC22A16Q86VW1 577 aa12.31□□□□□ -0.44
SPIDR-217ENST00000522117 UBR7Q8N806 425 aa12.31□□□□□ -0.44
SPIDR-217ENST00000522117 SLAIN1Q8ND83 568 aa12.31□□□□□ -0.44
SPIDR-217ENST00000522117 OR13F1Q8NGS4 319 aa12.31□□□□□ -0.44
SPIDR-217ENST00000522117 CDRT15Q96T59 188 aa12.31□□□□□ -0.44
SPIDR-217ENST00000522117 SERPINI1Q99574 410 aa12.31□□□□□ -0.44
SPIDR-217ENST00000522117 AIFM2Q9BRQ8 373 aa12.31□□□□□ -0.44
SPIDR-217ENST00000522117 OR2B2Q9GZK3 357 aa12.31□□□□□ -0.44
SPIDR-217ENST00000522117 POLE4Q9NR33 117 aa12.31□□□□□ -0.44
SPIDR-217ENST00000522117 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.31□□□□□ -0.44
SPIDR-217ENST00000522117 VPS28Q9UK41 221 aa12.31□□□□□ -0.44
SPIDR-217ENST00000522117 PRSS47A8MTI9 375 aa12.3□□□□□ -0.44
SPIDR-217ENST00000522117 B8ZZF3 427 aa12.3□□□□□ -0.44
SPIDR-217ENST00000522117 USP17L12C9JPN9 530 aa12.3□□□□□ -0.44
SPIDR-217ENST00000522117 USP17L21D6R901 530 aa12.3□□□□□ -0.44
SPIDR-217ENST00000522117 ACOT8O14734 319 aa12.3□□□□□ -0.44
SPIDR-217ENST00000522117 TGFB1I1O43294 461 aa12.3□□□□□ -0.44
SPIDR-217ENST00000522117 DYRK3O43781 588 aa12.3□□□□□ -0.44
SPIDR-217ENST00000522117 ZBTB14O43829 449 aa12.3□□□□□ -0.44
SPIDR-217ENST00000522117 NOL3O60936 208 aaKnown RBP12.3□□□□□ -0.44
SPIDR-217ENST00000522117 KRT18P05783 430 aaKnown RBP12.3□□□□□ -0.44
SPIDR-217ENST00000522117 UGT2B4P06133 528 aa12.3□□□□□ -0.44
SPIDR-217ENST00000522117 RAD23AP54725 363 aa12.3□□□□□ -0.44
SPIDR-217ENST00000522117 HSD17B7P56937 341 aa12.3□□□□□ -0.44
SPIDR-217ENST00000522117 CDC20Q12834 499 aa12.3□□□□□ -0.44
SPIDR-217ENST00000522117 DLG2Q15700 870 aa12.3□□□□□ -0.44
SPIDR-217ENST00000522117 ANKRD22Q5VYY1 191 aa12.3□□□□□ -0.44
SPIDR-217ENST00000522117 ARHGEF19Q8IW93 802 aa12.3□□□□□ -0.44
SPIDR-217ENST00000522117 ARL6IP6Q8N6S5 226 aa12.3□□□□□ -0.44
SPIDR-217ENST00000522117 DTX3Q8N9I9 347 aa12.3□□□□□ -0.44
SPIDR-217ENST00000522117 GALNT6Q8NCL4 622 aa12.3□□□□□ -0.44
SPIDR-217ENST00000522117 PIWIL2Q8TC59 973 aaKnown RBP12.3□□□□□ -0.44
SPIDR-217ENST00000522117 LRTOMTQ8WZ04 291 aa12.3□□□□□ -0.44
SPIDR-217ENST00000522117 SDCCAG3Q96C92 435 aa12.3□□□□□ -0.44
SPIDR-217ENST00000522117 RUSC1Q9BVN2 902 aa12.3□□□□□ -0.44
SPIDR-217ENST00000522117 WDR12Q9GZL7 423 aaKnown RBP12.3□□□□□ -0.44
SPIDR-217ENST00000522117 BCAS3Q9H6U6 928 aa12.3□□□□□ -0.44
SPIDR-217ENST00000522117 HMG20AQ9NP66 347 aa12.3□□□□□ -0.44
SPIDR-217ENST00000522117 ABI2Q9NYB9 513 aaPredicted RBP12.3□□□□□ -0.44
SPIDR-217ENST00000522117 IPO11Q9UI26 975 aaKnown RBP12.3□□□□□ -0.44
SPIDR-217ENST00000522117 PSME2Q9UL46 239 aa12.3□□□□□ -0.44
SPIDR-217ENST00000522117 TCAF1Q9Y4C2 921 aa12.3□□□□□ -0.44
SPIDR-217ENST00000522117 FARP1Q9Y4F1 1045 aaPredicted RBP12.3□□□□□ -0.44
SPIDR-217ENST00000522117 TAF1LQ8IZX4 1826 aa12.3□□□□□ -0.44
SPIDR-217ENST00000522117 SNTNA6NMZ2 147 aa12.3□□□□□ -0.44
SPIDR-217ENST00000522117 ASNA1O43681 348 aa12.3□□□□□ -0.44
SPIDR-217ENST00000522117 ACSL4O60488 711 aa12.3□□□□□ -0.44
SPIDR-217ENST00000522117 SEC24DO94855 1032 aaPredicted RBP12.3□□□□□ -0.44
SPIDR-217ENST00000522117 SLC5A1P13866 664 aa12.3□□□□□ -0.44
SPIDR-217ENST00000522117 MYF6P23409 242 aa12.3□□□□□ -0.44
SPIDR-217ENST00000522117 RFC4P35249 363 aa12.3□□□□□ -0.44
SPIDR-217ENST00000522117 NAMPTP43490 491 aa12.3□□□□□ -0.44
SPIDR-217ENST00000522117 SLC12A3P55017 1021 aa12.3□□□□□ -0.44
SPIDR-217ENST00000522117 PKNOX1P55347 436 aa12.3□□□□□ -0.44
SPIDR-217ENST00000522117 FSCBQ5H9T9 825 aa12.3□□□□□ -0.44
SPIDR-217ENST00000522117 IQSEC1Q6DN90 963 aa12.3□□□□□ -0.44
SPIDR-217ENST00000522117 ATG14Q6ZNE5 492 aa12.3□□□□□ -0.44
SPIDR-217ENST00000522117 LURAP1LQ8IV03 231 aa12.3□□□□□ -0.44
SPIDR-217ENST00000522117 HAS1Q92839 578 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 152.4 ms