RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 STAP1Q9ULZ2 295 aa18.81■□□□□ 0.6
SDC2-202ENST00000518385 INPP5FQ9Y2H2 1132 aa18.81■□□□□ 0.6
SDC2-202ENST00000518385 PCDHB7Q9Y5E2 793 aa18.81■□□□□ 0.6
SDC2-202ENST00000518385 A0A0G2JND7 137 aa18.81■□□□□ 0.6
SDC2-202ENST00000518385 BIRC5O15392 142 aa18.81■□□□□ 0.6
SDC2-202ENST00000518385 ZSCAN5DPP0CG00 497 aa18.81■□□□□ 0.6
SDC2-202ENST00000518385 RBP3P10745 1247 aa18.81■□□□□ 0.6
SDC2-202ENST00000518385 TYMPP19971 482 aa18.81■□□□□ 0.6
SDC2-202ENST00000518385 PGM1P36871 562 aa18.81■□□□□ 0.6
SDC2-202ENST00000518385 CCNFP41002 786 aa18.81■□□□□ 0.6
SDC2-202ENST00000518385 NR2C2P49116 596 aa18.81■□□□□ 0.6
SDC2-202ENST00000518385 AIF1P55008 147 aa18.81■□□□□ 0.6
SDC2-202ENST00000518385 AP2B1P63010 937 aa18.81■□□□□ 0.6
SDC2-202ENST00000518385 IRX4P78413 519 aa18.81■□□□□ 0.6
SDC2-202ENST00000518385 RCN2Q14257 317 aa18.81■□□□□ 0.6
SDC2-202ENST00000518385 MAPRE1Q15691 268 aaKnown RBP18.81■□□□□ 0.6
SDC2-202ENST00000518385 PDCD2Q16342 344 aaPredicted RBP18.81■□□□□ 0.6
SDC2-202ENST00000518385 STXBP5Q5T5C0 1151 aa18.81■□□□□ 0.6
SDC2-202ENST00000518385 DEFB128Q7Z7B8 93 aa18.81■□□□□ 0.6
SDC2-202ENST00000518385 SLC26A11Q86WA9 606 aa18.81■□□□□ 0.6
SDC2-202ENST00000518385 PDCD7Q8N8D1 485 aaKnown RBP18.81■□□□□ 0.6
SDC2-202ENST00000518385 GATA6Q92908 595 aa18.81■□□□□ 0.6
SDC2-202ENST00000518385 HAUS1Q96CS2 278 aa18.81■□□□□ 0.6
SDC2-202ENST00000518385 KCNK13Q9HB14 408 aa18.81■□□□□ 0.6
SDC2-202ENST00000518385 CNGB3Q9NQW8 809 aa18.81■□□□□ 0.6
SDC2-202ENST00000518385 TAS2R1Q9NYW7 299 aa18.81■□□□□ 0.6
SDC2-202ENST00000518385 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.8■□□□□ 0.6
SDC2-202ENST00000518385 H0Y3Z8 333 aa18.8■□□□□ 0.6
SDC2-202ENST00000518385 FCHO1O14526 889 aa18.8■□□□□ 0.6
SDC2-202ENST00000518385 KIAA0355O15063 1070 aa18.8■□□□□ 0.6
SDC2-202ENST00000518385 ZNF189O75820 626 aaPredicted RBP18.8■□□□□ 0.6
SDC2-202ENST00000518385 TIMP1P01033 207 aa18.8■□□□□ 0.6
SDC2-202ENST00000518385 IL4RP24394 825 aa18.8■□□□□ 0.6
SDC2-202ENST00000518385 RPL22P35268 128 aaKnown RBP18.8■□□□□ 0.6
SDC2-202ENST00000518385 ROR1Q01973 937 aa18.8■□□□□ 0.6
SDC2-202ENST00000518385 ADIGQ0VDE8 80 aa18.8■□□□□ 0.6
SDC2-202ENST00000518385 TIGD5Q53EQ6 642 aa18.8■□□□□ 0.6
SDC2-202ENST00000518385 NOMO2Q5JPE7 1267 aa18.8■□□□□ 0.6
SDC2-202ENST00000518385 RAB41Q5JT25 222 aa18.8■□□□□ 0.6
SDC2-202ENST00000518385 TMCO4Q5TGY1 634 aa18.8■□□□□ 0.6
SDC2-202ENST00000518385 SH2D5Q6ZV89 423 aa18.8■□□□□ 0.6
SDC2-202ENST00000518385 BNIPLQ7Z465 357 aa18.8■□□□□ 0.6
SDC2-202ENST00000518385 UBE2Q1Q7Z7E8 422 aa18.8■□□□□ 0.6
SDC2-202ENST00000518385 FAM35AQ86V20 835 aa18.8■□□□□ 0.6
SDC2-202ENST00000518385 CRIPAKQ8N1N5 446 aa18.8■□□□□ 0.6
SDC2-202ENST00000518385 SCML4Q8N228 414 aa18.8■□□□□ 0.6
SDC2-202ENST00000518385 VWCEQ96DN2 955 aa18.8■□□□□ 0.6
SDC2-202ENST00000518385 SMARCD1Q96GM5 515 aa18.8■□□□□ 0.6
SDC2-202ENST00000518385 SLC2A13Q96QE2 648 aa18.8■□□□□ 0.6
SDC2-202ENST00000518385 SLC9A7Q96T83 725 aa18.8■□□□□ 0.6
SDC2-202ENST00000518385 TDRD15B5MCY1 1934 aaKnown RBP18.79■□□□□ 0.6
SDC2-202ENST00000518385 TRIM43BA6NCK2 446 aa18.79■□□□□ 0.6
SDC2-202ENST00000518385 CASTOR2A6NHX0 329 aa18.79■□□□□ 0.6
SDC2-202ENST00000518385 SPECC1L-ADORA2AF8WAN1 911 aa18.79■□□□□ 0.6
SDC2-202ENST00000518385 TM7SF2O76062 418 aa18.79■□□□□ 0.6
SDC2-202ENST00000518385 B3GAT3O94766 335 aa18.79■□□□□ 0.6
SDC2-202ENST00000518385 IFNB1P01574 187 aa18.79■□□□□ 0.6
SDC2-202ENST00000518385 SNRPAP09012 282 aaKnown RBP18.79■□□□□ 0.6
SDC2-202ENST00000518385 IGFBP6P24592 240 aaPredicted RBP18.79■□□□□ 0.6
SDC2-202ENST00000518385 ACAT1P24752 427 aaKnown RBP18.79■□□□□ 0.6
SDC2-202ENST00000518385 SERPINB3P29508 390 aa18.79■□□□□ 0.6
SDC2-202ENST00000518385 L1CAMP32004 1257 aa18.79■□□□□ 0.6
SDC2-202ENST00000518385 SERPINB4P48594 390 aa18.79■□□□□ 0.6
SDC2-202ENST00000518385 SERPINB9P50453 376 aa18.79■□□□□ 0.6
SDC2-202ENST00000518385 BCAR1P56945 870 aa18.79■□□□□ 0.6
SDC2-202ENST00000518385 FAM171BQ6P995 826 aa18.79■□□□□ 0.6
SDC2-202ENST00000518385 CNKSR3Q6P9H4 555 aa18.79■□□□□ 0.6
SDC2-202ENST00000518385 THEM5Q8N1Q8 247 aa18.79■□□□□ 0.6
SDC2-202ENST00000518385 PLD5Q8N7P1 536 aa18.79■□□□□ 0.6
SDC2-202ENST00000518385 C3orf58Q8NDZ4 430 aa18.79■□□□□ 0.6
SDC2-202ENST00000518385 URGCPQ8TCY9 931 aa18.79■□□□□ 0.6
SDC2-202ENST00000518385 CLEC4CQ8WTT0 213 aa18.79■□□□□ 0.6
SDC2-202ENST00000518385 TRIM43Q96BQ3 446 aaPredicted RBP18.79■□□□□ 0.6
SDC2-202ENST00000518385 RTP4Q96DX8 246 aa18.79■□□□□ 0.6
SDC2-202ENST00000518385 OLFM3Q96PB7 478 aa18.79■□□□□ 0.6
SDC2-202ENST00000518385 POPDC2Q9HBU9 364 aa18.79■□□□□ 0.6
SDC2-202ENST00000518385 CSNK1G1Q9HCP0 422 aa18.79■□□□□ 0.6
SDC2-202ENST00000518385 KRT82Q9NSB4 513 aa18.79■□□□□ 0.6
SDC2-202ENST00000518385 ETAA1Q9NY74 926 aa18.79■□□□□ 0.6
SDC2-202ENST00000518385 DLGAP2Q9P1A6 1054 aa18.79■□□□□ 0.6
SDC2-202ENST00000518385 CACNG4Q9UBN1 327 aa18.79■□□□□ 0.6
SDC2-202ENST00000518385 TAGLN3Q9UI15 199 aa18.79■□□□□ 0.6
SDC2-202ENST00000518385 XPO7Q9UIA9 1087 aaKnown RBP18.79■□□□□ 0.6
SDC2-202ENST00000518385 DCTN4Q9UJW0 460 aa18.79■□□□□ 0.6
SDC2-202ENST00000518385 TTC3P53804 2025 aa18.78■□□□□ 0.6
SDC2-202ENST00000518385 BCLAF3A2AJT9 711 aaKnown RBP18.78■□□□□ 0.6
SDC2-202ENST00000518385 COPEO14579 308 aa18.78■□□□□ 0.6
SDC2-202ENST00000518385 AP1G2O75843 785 aa18.78■□□□□ 0.6
SDC2-202ENST00000518385 PDHA1P08559 390 aa18.78■□□□□ 0.6
SDC2-202ENST00000518385 EN2P19622 333 aaPredicted RBP18.78■□□□□ 0.6
SDC2-202ENST00000518385 CNTFP26441 200 aa18.78■□□□□ 0.6
SDC2-202ENST00000518385 SSTR1P30872 391 aa18.78■□□□□ 0.6
SDC2-202ENST00000518385 KIAA0319Q5VV43 1072 aa18.78■□□□□ 0.6
SDC2-202ENST00000518385 DARS2Q6PI48 645 aaKnown RBP18.78■□□□□ 0.6
SDC2-202ENST00000518385 ANKMY2Q8IV38 441 aa18.78■□□□□ 0.6
SDC2-202ENST00000518385 DEFB106AQ8N104 65 aa18.78■□□□□ 0.6
SDC2-202ENST00000518385 IRGQQ8WZA9 623 aa18.78■□□□□ 0.6
SDC2-202ENST00000518385 PCED1BQ96HM7 432 aa18.78■□□□□ 0.6
SDC2-202ENST00000518385 SUSD3Q96L08 255 aa18.78■□□□□ 0.6
SDC2-202ENST00000518385 NPY6RQ99463 290 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms