RNA–Protein interactions for RNA: ENST00000505009.5

UBE2D3-218, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-218ENST00000505009 FBXO4Q9UKT5 387 aa5.19□□□□□ -1.58
UBE2D3-218ENST00000505009 MAGED2Q9UNF1 606 aaPredicted RBP5.19□□□□□ -1.58
UBE2D3-218ENST00000505009 ZBTB1Q9Y2K1 713 aa5.19□□□□□ -1.58
UBE2D3-218ENST00000505009 LMTK3Q96Q04 1460 aa5.19□□□□□ -1.58
UBE2D3-218ENST00000505009 CYP3A7-CYP3A51PA0A087WV96 503 aa5.18□□□□□ -1.58
UBE2D3-218ENST00000505009 FAM90A8PA6NJQ4 464 aa5.18□□□□□ -1.58
UBE2D3-218ENST00000505009 EFCAB8A8MWE9 144 aa5.18□□□□□ -1.58
UBE2D3-218ENST00000505009 H0YGN5 161 aa5.18□□□□□ -1.58
UBE2D3-218ENST00000505009 LCKP06239 509 aa5.18□□□□□ -1.58
UBE2D3-218ENST00000505009 FAM90A13PP0C7W8 464 aa5.18□□□□□ -1.58
UBE2D3-218ENST00000505009 FAM90A24PP0C7X0 464 aa5.18□□□□□ -1.58
UBE2D3-218ENST00000505009 CYP3A7P24462 503 aa5.18□□□□□ -1.58
UBE2D3-218ENST00000505009 KLHL22Q53GT1 634 aa5.18□□□□□ -1.58
UBE2D3-218ENST00000505009 TTC39AQ5SRH9 613 aa5.18□□□□□ -1.58
UBE2D3-218ENST00000505009 ATPAF1Q5TC12 328 aaPredicted RBP5.18□□□□□ -1.58
UBE2D3-218ENST00000505009 GGT6Q6P531 493 aa5.18□□□□□ -1.58
UBE2D3-218ENST00000505009 CYB5R4Q7L1T6 521 aa5.18□□□□□ -1.58
UBE2D3-218ENST00000505009 RTL10Q7L3V2 364 aa5.18□□□□□ -1.58
UBE2D3-218ENST00000505009 B4GALNT2Q8NHY0 566 aa5.18□□□□□ -1.58
UBE2D3-218ENST00000505009 FAM71BQ8TC56 605 aa5.18□□□□□ -1.58
UBE2D3-218ENST00000505009 INPP5DQ92835 1189 aa5.18□□□□□ -1.58
UBE2D3-218ENST00000505009 LYZL4Q96KX0 146 aa5.18□□□□□ -1.58
UBE2D3-218ENST00000505009 ADAD1Q96M93 576 aaKnown RBP5.18□□□□□ -1.58
UBE2D3-218ENST00000505009 HIPK2Q9H2X6 1198 aa5.18□□□□□ -1.58
UBE2D3-218ENST00000505009 TXNRD2Q9NNW7 524 aa5.18□□□□□ -1.58
UBE2D3-218ENST00000505009 TNFSF13BQ9Y275 285 aa5.18□□□□□ -1.58
UBE2D3-218ENST00000505009 LRCH1Q9Y2L9 728 aa5.18□□□□□ -1.58
UBE2D3-218ENST00000505009 TBC1D3DA0A087WVF3 549 aa5.17□□□□□ -1.58
UBE2D3-218ENST00000505009 TBC1D3IA0A087WXS9 549 aa5.17□□□□□ -1.58
UBE2D3-218ENST00000505009 TBC1D3EA0A087X179 549 aa5.17□□□□□ -1.58
UBE2D3-218ENST00000505009 TBC1D3KA0A087X1G2 549 aa5.17□□□□□ -1.58
UBE2D3-218ENST00000505009 TBC1D3BA6NDS4 549 aa5.17□□□□□ -1.58
UBE2D3-218ENST00000505009 TBC1D3FA6NER0 549 aaPredicted RBP5.17□□□□□ -1.58
UBE2D3-218ENST00000505009 FOXO6A8MYZ6 492 aa5.17□□□□□ -1.58
UBE2D3-218ENST00000505009 TBC1D3LB9A6J9 549 aa5.17□□□□□ -1.58
UBE2D3-218ENST00000505009 TBC1D3HP0C7X1 549 aa5.17□□□□□ -1.58
UBE2D3-218ENST00000505009 GYS1P13807 737 aa5.17□□□□□ -1.58
UBE2D3-218ENST00000505009 CDC25AP30304 524 aa5.17□□□□□ -1.58
UBE2D3-218ENST00000505009 HOXA11P31270 313 aaPredicted RBP5.17□□□□□ -1.58
UBE2D3-218ENST00000505009 ARRB2P32121 409 aa5.17□□□□□ -1.58
UBE2D3-218ENST00000505009 CDK7P50613 346 aa5.17□□□□□ -1.58
UBE2D3-218ENST00000505009 RNASELQ05823 741 aaKnown RBP5.17□□□□□ -1.58
UBE2D3-218ENST00000505009 PTK2BQ14289 1009 aa5.17□□□□□ -1.58
UBE2D3-218ENST00000505009 SEMA3AQ14563 771 aa5.17□□□□□ -1.58
UBE2D3-218ENST00000505009 TBRG1Q3YBR2 411 aa5.17□□□□□ -1.58
UBE2D3-218ENST00000505009 TRIM60Q495X7 471 aa5.17□□□□□ -1.58
UBE2D3-218ENST00000505009 MAP9Q49MG5 647 aa5.17□□□□□ -1.58
UBE2D3-218ENST00000505009 ARL13AQ5H913 290 aaPredicted RBP5.17□□□□□ -1.58
UBE2D3-218ENST00000505009 C10orf76Q5T2E6 689 aa5.17□□□□□ -1.58
UBE2D3-218ENST00000505009 TBC1D3GQ6DHY5 549 aa5.17□□□□□ -1.58
UBE2D3-218ENST00000505009 TBC1D3CQ6IPX1 549 aa5.17□□□□□ -1.58
UBE2D3-218ENST00000505009 KIAA1161Q6NSJ0 714 aa5.17□□□□□ -1.58
UBE2D3-218ENST00000505009 TBC1D3Q8IZP1 549 aaPredicted RBP5.17□□□□□ -1.58
UBE2D3-218ENST00000505009 ZNF527Q8NB42 609 aa5.17□□□□□ -1.58
UBE2D3-218ENST00000505009 EID2BQ96D98 161 aa5.17□□□□□ -1.58
UBE2D3-218ENST00000505009 SORBS1Q9BX66 1292 aaKnown RBP5.17□□□□□ -1.58
UBE2D3-218ENST00000505009 TMEM120AQ9BXJ8 343 aa5.17□□□□□ -1.58
UBE2D3-218ENST00000505009 LZTS1Q9Y250 596 aa5.17□□□□□ -1.58
UBE2D3-218ENST00000505009 FAM90A18PA6NE21 464 aa5.16□□□□□ -1.58
UBE2D3-218ENST00000505009 FAM90A16PA6NEW6 464 aa5.16□□□□□ -1.58
UBE2D3-218ENST00000505009 MBD3L5A6NJ08 208 aaPredicted RBP5.16□□□□□ -1.58
UBE2D3-218ENST00000505009 FAM90A9PA6NNJ1 464 aa5.16□□□□□ -1.58
UBE2D3-218ENST00000505009 SLC38A8A6NNN8 435 aa5.16□□□□□ -1.58
UBE2D3-218ENST00000505009 FAM90A5PA8MXJ8 464 aa5.16□□□□□ -1.58
UBE2D3-218ENST00000505009 GTPBP1O00178 669 aaKnown RBP5.16□□□□□ -1.58
UBE2D3-218ENST00000505009 TNFRSF13BO14836 293 aaPredicted RBP5.16□□□□□ -1.58
UBE2D3-218ENST00000505009 NEURL1O76050 574 aa5.16□□□□□ -1.58
UBE2D3-218ENST00000505009 FAM90A15PP0C7V4 464 aa5.16□□□□□ -1.58
UBE2D3-218ENST00000505009 FAM90A14PP0C7W9 464 aa5.16□□□□□ -1.58
UBE2D3-218ENST00000505009 SERPINB3P29508 390 aa5.16□□□□□ -1.58
UBE2D3-218ENST00000505009 STAT1P42224 750 aa5.16□□□□□ -1.58
UBE2D3-218ENST00000505009 SF3A3Q12874 501 aaKnown RBP eCLIP5.16□□□□□ -1.58
UBE2D3-218ENST00000505009 ERV3-1Q14264 604 aa5.16□□□□□ -1.58
UBE2D3-218ENST00000505009 SPARCL1Q14515 664 aa5.16□□□□□ -1.58
UBE2D3-218ENST00000505009 UBAP2Q5T6F2 1119 aaKnown RBP5.16□□□□□ -1.58
UBE2D3-218ENST00000505009 LPAR1Q92633 364 aa5.16□□□□□ -1.58
UBE2D3-218ENST00000505009 MAP6D1Q9H9H5 199 aa5.16□□□□□ -1.58
UBE2D3-218ENST00000505009 OBP2BQ9NPH6 170 aa5.16□□□□□ -1.58
UBE2D3-218ENST00000505009 LIN7CQ9NUP9 197 aaKnown RBP5.16□□□□□ -1.58
UBE2D3-218ENST00000505009 COPG1Q9Y678 874 aaKnown RBP5.16□□□□□ -1.58
UBE2D3-218ENST00000505009 GAGE12JA6NER3 117 aa5.15□□□□□ -1.59
UBE2D3-218ENST00000505009 AGAP5A6NIR3 686 aa5.15□□□□□ -1.59
UBE2D3-218ENST00000505009 LGALS16A8MUM7 142 aa5.15□□□□□ -1.59
UBE2D3-218ENST00000505009 SPTLC2O15270 562 aa5.15□□□□□ -1.59
UBE2D3-218ENST00000505009 SKAP2O75563 359 aaPredicted RBP5.15□□□□□ -1.59
UBE2D3-218ENST00000505009 ITGA2BP08514 1039 aa5.15□□□□□ -1.59
UBE2D3-218ENST00000505009 SETSIPP0DME0 302 aa5.15□□□□□ -1.59
UBE2D3-218ENST00000505009 PGGT1BP53609 377 aa5.15□□□□□ -1.59
UBE2D3-218ENST00000505009 GPR162Q16538 588 aa5.15□□□□□ -1.59
UBE2D3-218ENST00000505009 ENTPD8Q5MY95 495 aa5.15□□□□□ -1.59
UBE2D3-218ENST00000505009 PDXDC1Q6P996 788 aa5.15□□□□□ -1.59
UBE2D3-218ENST00000505009 KIAA1324Q6UXG2 1013 aaKnown RBP5.15□□□□□ -1.59
UBE2D3-218ENST00000505009 HMGB4Q8WW32 186 aa5.15□□□□□ -1.59
UBE2D3-218ENST00000505009 ZNF419Q96HQ0 510 aaPredicted RBP5.15□□□□□ -1.59
UBE2D3-218ENST00000505009 MAGEH1Q9H213 219 aa5.15□□□□□ -1.59
UBE2D3-218ENST00000505009 ZNF304Q9HCX3 659 aa5.15□□□□□ -1.59
UBE2D3-218ENST00000505009 SEPSECSQ9HD40 501 aaKnown RBP5.15□□□□□ -1.59
UBE2D3-218ENST00000505009 HERC5Q9UII4 1024 aaKnown RBP5.15□□□□□ -1.59
UBE2D3-218ENST00000505009 CNTN6Q9UQ52 1028 aa5.15□□□□□ -1.59
UBE2D3-218ENST00000505009 INSL5Q9Y5Q6 135 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms