RNA–Protein interactions for RNA: ENST00000495010.5

VARS-228, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 1,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-228ENST00000495010 O00370 1275 aa14.76□□□□□ -0.05
VARS-228ENST00000495010 MAGEC1O60732 1142 aa14.76□□□□□ -0.05
VARS-228ENST00000495010 IL1BP01584 269 aa14.76□□□□□ -0.05
VARS-228ENST00000495010 IGLV3-27P01718 113 aa14.76□□□□□ -0.05
VARS-228ENST00000495010 LTFP02788 710 aa14.76□□□□□ -0.05
VARS-228ENST00000495010 CKMT2P17540 419 aa14.76□□□□□ -0.05
VARS-228ENST00000495010 C5AR1P21730 350 aa14.76□□□□□ -0.05
VARS-228ENST00000495010 TBXAS1P24557 533 aaPredicted RBP14.76□□□□□ -0.05
VARS-228ENST00000495010 ACTN2P35609 894 aa14.76□□□□□ -0.05
VARS-228ENST00000495010 NXPH1P58417 271 aa14.76□□□□□ -0.05
VARS-228ENST00000495010 RPS24P62847 133 aaKnown RBP14.76□□□□□ -0.05
VARS-228ENST00000495010 ECT2LQ008S8 904 aa14.76□□□□□ -0.05
VARS-228ENST00000495010 DPYDQ12882 1025 aa14.76□□□□□ -0.05
VARS-228ENST00000495010 LRMPQ12912 555 aa14.76□□□□□ -0.05
VARS-228ENST00000495010 BNIP3Q12983 259 aa14.76□□□□□ -0.05
VARS-228ENST00000495010 ARID5BQ14865 1188 aa14.76□□□□□ -0.05
VARS-228ENST00000495010 RTP5Q14D33 572 aa14.76□□□□□ -0.05
VARS-228ENST00000495010 HS1BP3Q53T59 392 aa14.76□□□□□ -0.05
VARS-228ENST00000495010 PITRM1Q5JRX3 1037 aa14.76□□□□□ -0.05
VARS-228ENST00000495010 FBXL19Q6PCT2 694 aa14.76□□□□□ -0.05
VARS-228ENST00000495010 GPR155Q7Z3F1 870 aa14.76□□□□□ -0.05
VARS-228ENST00000495010 ZNF605Q86T29 641 aa14.76□□□□□ -0.05
VARS-228ENST00000495010 PRPF39Q86UA1 669 aaKnown RBP14.76□□□□□ -0.05
VARS-228ENST00000495010 FGF11Q92914 225 aa14.76□□□□□ -0.05
VARS-228ENST00000495010 COL26A1Q96A83 441 aa14.76□□□□□ -0.05
VARS-228ENST00000495010 MRGPRX3Q96LB0 322 aa14.76□□□□□ -0.05
VARS-228ENST00000495010 SPATA32Q96LK8 384 aa14.76□□□□□ -0.05
VARS-228ENST00000495010 SERPINB11Q96P15 392 aa14.76□□□□□ -0.05
VARS-228ENST00000495010 ERVMER34-1Q9H9K5 563 aa14.76□□□□□ -0.05
VARS-228ENST00000495010 INTS6Q9UL03 887 aaKnown RBP14.76□□□□□ -0.05
VARS-228ENST00000495010 HPSEQ9Y251 543 aa14.76□□□□□ -0.05
VARS-228ENST00000495010 RAI2Q9Y5P3 530 aa14.76□□□□□ -0.05
VARS-228ENST00000495010 ASXL3Q9C0F0 2248 aa14.76□□□□□ -0.05
VARS-228ENST00000495010 M0QYV0 167 aa14.75□□□□□ -0.05
VARS-228ENST00000495010 WNT9AO14904 365 aa14.75□□□□□ -0.05
VARS-228ENST00000495010 MOCS2O96007 188 aaPredicted RBP14.75□□□□□ -0.05
VARS-228ENST00000495010 CENPBP07199 599 aaPredicted RBP14.75□□□□□ -0.05
VARS-228ENST00000495010 GLDCP23378 1020 aa14.75□□□□□ -0.05
VARS-228ENST00000495010 ADPRHP54922 357 aa14.75□□□□□ -0.05
VARS-228ENST00000495010 MCCD1P59942 119 aaPredicted RBP14.75□□□□□ -0.05
VARS-228ENST00000495010 KCNJ12Q14500 433 aa14.75□□□□□ -0.05
VARS-228ENST00000495010 CBWD6Q4V339 395 aa14.75□□□□□ -0.05
VARS-228ENST00000495010 ZCWPW2Q504Y3 356 aa14.75□□□□□ -0.05
VARS-228ENST00000495010 CBWD3Q5JTY5 395 aa14.75□□□□□ -0.05
VARS-228ENST00000495010 CBWD5Q5RIA9 395 aa14.75□□□□□ -0.05
VARS-228ENST00000495010 NADSYN1Q6IA69 706 aa14.75□□□□□ -0.05
VARS-228ENST00000495010 NAPEPLDQ6IQ20 393 aa14.75□□□□□ -0.05
VARS-228ENST00000495010 LCLAT1Q6UWP7 414 aa14.75□□□□□ -0.05
VARS-228ENST00000495010 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.75□□□□□ -0.05
VARS-228ENST00000495010 MMS22LQ6ZRQ5 1243 aa14.75□□□□□ -0.05
VARS-228ENST00000495010 HSCBQ8IWL3 235 aa14.75□□□□□ -0.05
VARS-228ENST00000495010 CFAP52Q8N1V2 620 aa14.75□□□□□ -0.05
VARS-228ENST00000495010 STK40Q8N2I9 435 aa14.75□□□□□ -0.05
VARS-228ENST00000495010 AADATQ8N5Z0 425 aa14.75□□□□□ -0.05
VARS-228ENST00000495010 MFSD2AQ8NA29 543 aa14.75□□□□□ -0.05
VARS-228ENST00000495010 SNIP1Q8TAD8 396 aaKnown RBP14.75□□□□□ -0.05
VARS-228ENST00000495010 TSC1Q92574 1164 aa14.75□□□□□ -0.05
VARS-228ENST00000495010 CCDC34Q96HJ3 373 aa14.75□□□□□ -0.05
VARS-228ENST00000495010 LMLNQ96KR4 655 aa14.75□□□□□ -0.05
VARS-228ENST00000495010 PRICKLE1Q96MT3 831 aaPredicted RBP14.75□□□□□ -0.05
VARS-228ENST00000495010 FAM129BQ96TA1 746 aa14.75□□□□□ -0.05
VARS-228ENST00000495010 TSG101Q99816 390 aa14.75□□□□□ -0.05
VARS-228ENST00000495010 CLCA2Q9UQC9 943 aa14.75□□□□□ -0.05
VARS-228ENST00000495010 TEX51A0A1B0GUA7 166 aa14.74□□□□□ -0.05
VARS-228ENST00000495010 BRINP1O60477 761 aa14.74□□□□□ -0.05
VARS-228ENST00000495010 FBXO21O94952 628 aa14.74□□□□□ -0.05
VARS-228ENST00000495010 LUC7L3O95232 432 aaKnown RBP14.74□□□□□ -0.05
VARS-228ENST00000495010 PAEPP09466 180 aa14.74□□□□□ -0.05
VARS-228ENST00000495010 CTSOP43234 321 aaPredicted RBP14.74□□□□□ -0.05
VARS-228ENST00000495010 RXRGP48443 463 aa14.74□□□□□ -0.05
VARS-228ENST00000495010 NDUFA8P51970 172 aa14.74□□□□□ -0.05
VARS-228ENST00000495010 CCDC173Q0VFZ6 552 aa14.74□□□□□ -0.05
VARS-228ENST00000495010 STAT4Q14765 748 aa14.74□□□□□ -0.05
VARS-228ENST00000495010 STILQ15468 1287 aa14.74□□□□□ -0.05
VARS-228ENST00000495010 PKDCCQ504Y2 493 aa14.74□□□□□ -0.05
VARS-228ENST00000495010 FSCBQ5H9T9 825 aa14.74□□□□□ -0.05
VARS-228ENST00000495010 MS4A13Q5J8X5 152 aa14.74□□□□□ -0.05
VARS-228ENST00000495010 PMF1Q6P1K2 205 aa14.74□□□□□ -0.05
VARS-228ENST00000495010 TMEM270Q6UE05 265 aa14.74□□□□□ -0.05
VARS-228ENST00000495010 SLC35F5Q8WV83 523 aa14.74□□□□□ -0.05
VARS-228ENST00000495010 RPL10LQ96L21 214 aaKnown RBP14.74□□□□□ -0.05
VARS-228ENST00000495010 MIS12Q9H081 205 aa14.74□□□□□ -0.05
VARS-228ENST00000495010 NUCKS1Q9H1E3 243 aaKnown RBP14.74□□□□□ -0.05
VARS-228ENST00000495010 TJP2Q9UDY2 1190 aa14.74□□□□□ -0.05
VARS-228ENST00000495010 SLCO3A1Q9UIG8 710 aa14.74□□□□□ -0.05
VARS-228ENST00000495010 TLR6Q9Y2C9 796 aa14.74□□□□□ -0.05
VARS-228ENST00000495010 COQ4Q9Y3A0 265 aa14.74□□□□□ -0.05
VARS-228ENST00000495010 PCDHB4Q9Y5E5 795 aa14.74□□□□□ -0.05
VARS-228ENST00000495010 KNTC1P50748 2209 aa14.73□□□□□ -0.05
VARS-228ENST00000495010 CELSR3Q9NYQ7 3312 aa14.73□□□□□ -0.05
VARS-228ENST00000495010 ITIH6Q6UXX5 1313 aa14.73□□□□□ -0.05
VARS-228ENST00000495010 CAPN8A6NHC0 703 aa14.73□□□□□ -0.05
VARS-228ENST00000495010 SLC16A3O15427 465 aaKnown RBP14.73□□□□□ -0.05
VARS-228ENST00000495010 C1QL1O75973 258 aa14.73□□□□□ -0.05
VARS-228ENST00000495010 APOEP02649 317 aa14.73□□□□□ -0.05
VARS-228ENST00000495010 NUDT1P36639 197 aa14.73□□□□□ -0.05
VARS-228ENST00000495010 CXADRP78310 365 aa14.73□□□□□ -0.05
VARS-228ENST00000495010 DAB2P98082 770 aa14.73□□□□□ -0.05
VARS-228ENST00000495010 E2F1Q01094 437 aa14.73□□□□□ -0.05
VARS-228ENST00000495010 ELAVL3Q14576 367 aaKnown RBP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms