RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 NT5C1AQ9BXI3 368 aa12.02□□□□□ -0.48
PDZRN3-203ENST00000462146 GCOM2Q9BZD3 368 aaPredicted RBP12.02□□□□□ -0.48
PDZRN3-203ENST00000462146 COPS7BQ9H9Q2 264 aaPredicted RBP12.02□□□□□ -0.48
PDZRN3-203ENST00000462146 AS3MTQ9HBK9 375 aa12.02□□□□□ -0.48
PDZRN3-203ENST00000462146 HSFX1Q9UBD0 423 aa12.02□□□□□ -0.48
PDZRN3-203ENST00000462146 LZTS1Q9Y250 596 aa12.02□□□□□ -0.48
PDZRN3-203ENST00000462146 TNFSF13BQ9Y275 285 aa12.02□□□□□ -0.48
PDZRN3-203ENST00000462146 PCDHB12Q9Y5F1 795 aa12.02□□□□□ -0.48
PDZRN3-203ENST00000462146 hCG_2014768A0A024R1R8 64 aa12.02□□□□□ -0.49
PDZRN3-203ENST00000462146 A0A0A0MRY4 1105 aa12.02□□□□□ -0.49
PDZRN3-203ENST00000462146 G3V2L1 256 aa12.02□□□□□ -0.49
PDZRN3-203ENST00000462146 STX16-NPEPL1H3BU86 382 aa12.02□□□□□ -0.49
PDZRN3-203ENST00000462146 HNRNPRO43390 633 aaKnown RBP12.02□□□□□ -0.49
PDZRN3-203ENST00000462146 ASLP04424 464 aa12.02□□□□□ -0.49
PDZRN3-203ENST00000462146 PGAM1P18669 254 aa12.02□□□□□ -0.49
PDZRN3-203ENST00000462146 DPP6P42658 865 aa12.02□□□□□ -0.49
PDZRN3-203ENST00000462146 MYBPC1Q00872 1141 aa12.02□□□□□ -0.49
PDZRN3-203ENST00000462146 AMHR2Q16671 573 aa12.02□□□□□ -0.49
PDZRN3-203ENST00000462146 MAP3K21Q5TCX8 1036 aa12.02□□□□□ -0.49
PDZRN3-203ENST00000462146 LRRC8BQ6P9F7 803 aa12.02□□□□□ -0.49
PDZRN3-203ENST00000462146 IYDQ6PHW0 289 aa12.02□□□□□ -0.49
PDZRN3-203ENST00000462146 METTL7BQ6UX53 244 aa12.02□□□□□ -0.49
PDZRN3-203ENST00000462146 TDRD5Q8NAT2 981 aaKnown RBP12.02□□□□□ -0.49
PDZRN3-203ENST00000462146 HIC2Q96JB3 615 aa12.02□□□□□ -0.49
PDZRN3-203ENST00000462146 SPATA13Q96N96 652 aa12.02□□□□□ -0.49
PDZRN3-203ENST00000462146 TBCBQ99426 244 aa12.02□□□□□ -0.49
PDZRN3-203ENST00000462146 GPR20Q99678 358 aa12.02□□□□□ -0.49
PDZRN3-203ENST00000462146 RTKNQ9BST9 563 aa12.02□□□□□ -0.49
PDZRN3-203ENST00000462146 CYP3A43Q9HB55 503 aa12.02□□□□□ -0.49
PDZRN3-203ENST00000462146 DDX18Q9NVP1 670 aaKnown RBP12.02□□□□□ -0.49
PDZRN3-203ENST00000462146 ATXN10Q9UBB4 475 aa12.02□□□□□ -0.49
PDZRN3-203ENST00000462146 MORF4L1Q9UBU8 362 aa12.02□□□□□ -0.49
PDZRN3-203ENST00000462146 PSMD13Q9UNM6 376 aa12.02□□□□□ -0.49
PDZRN3-203ENST00000462146 RPS6KL1Q9Y6S9 549 aa12.02□□□□□ -0.49
PDZRN3-203ENST00000462146 RNF103O00237 685 aa12.01□□□□□ -0.49
PDZRN3-203ENST00000462146 CFLARO15519 480 aa12.01□□□□□ -0.49
PDZRN3-203ENST00000462146 CREB3O43889 395 aa12.01□□□□□ -0.49
PDZRN3-203ENST00000462146 DPEP1P16444 411 aa12.01□□□□□ -0.49
PDZRN3-203ENST00000462146 PIK3R1P27986 724 aa12.01□□□□□ -0.49
PDZRN3-203ENST00000462146 EPHA3P29320 983 aa12.01□□□□□ -0.49
PDZRN3-203ENST00000462146 USP46P62068 366 aa12.01□□□□□ -0.49
PDZRN3-203ENST00000462146 CDKL1Q00532 357 aa12.01□□□□□ -0.49
PDZRN3-203ENST00000462146 MS4A2Q01362 244 aa12.01□□□□□ -0.49
PDZRN3-203ENST00000462146 CNGA3Q16281 694 aa12.01□□□□□ -0.49
PDZRN3-203ENST00000462146 PKDCCQ504Y2 493 aa12.01□□□□□ -0.49
PDZRN3-203ENST00000462146 C6orf52Q5T4I8 152 aa12.01□□□□□ -0.49
PDZRN3-203ENST00000462146 TMEM198Q66K66 360 aa12.01□□□□□ -0.49
PDZRN3-203ENST00000462146 KLHDC10Q6PID8 442 aa12.01□□□□□ -0.49
PDZRN3-203ENST00000462146 MARVELD2Q8N4S9 558 aa12.01□□□□□ -0.49
PDZRN3-203ENST00000462146 CNKSR2Q8WXI2 1034 aa12.01□□□□□ -0.49
PDZRN3-203ENST00000462146 NDRG1Q92597 394 aaKnown RBP12.01□□□□□ -0.49
PDZRN3-203ENST00000462146 C12orf42Q96LP6 360 aa12.01□□□□□ -0.49
PDZRN3-203ENST00000462146 BTBD9Q96Q07 612 aa12.01□□□□□ -0.49
PDZRN3-203ENST00000462146 KCNK16Q96T55 309 aa12.01□□□□□ -0.49
PDZRN3-203ENST00000462146 DPEP3Q9H4B8 488 aa12.01□□□□□ -0.49
PDZRN3-203ENST00000462146 PREBQ9HCU5 417 aa12.01□□□□□ -0.49
PDZRN3-203ENST00000462146 PHF24Q9UPV7 400 aa12.01□□□□□ -0.49
PDZRN3-203ENST00000462146 AP4B1Q9Y6B7 739 aa12.01□□□□□ -0.49
PDZRN3-203ENST00000462146 SMIM31A0A1B0GVY4 71 aa12.01□□□□□ -0.49
PDZRN3-203ENST00000462146 PEX1O43933 1283 aa12.01□□□□□ -0.49
PDZRN3-203ENST00000462146 LCP1P13796 627 aa12.01□□□□□ -0.49
PDZRN3-203ENST00000462146 TMEM132DQ14C87 1099 aa12.01□□□□□ -0.49
PDZRN3-203ENST00000462146 FAM131BQ86XD5 332 aa12.01□□□□□ -0.49
PDZRN3-203ENST00000462146 GALNT4Q8N4A0 578 aa12.01□□□□□ -0.49
PDZRN3-203ENST00000462146 FAM156AQ8NDB6 213 aa12.01□□□□□ -0.49
PDZRN3-203ENST00000462146 CERS2Q96G23 380 aa12.01□□□□□ -0.49
PDZRN3-203ENST00000462146 AGAP3Q96P47 875 aa12.01□□□□□ -0.49
PDZRN3-203ENST00000462146 CDRT15Q96T59 188 aa12.01□□□□□ -0.49
PDZRN3-203ENST00000462146 SLC4A5Q9BY07 1137 aa12.01□□□□□ -0.49
PDZRN3-203ENST00000462146 PDZD7Q9H5P4 517 aa12.01□□□□□ -0.49
PDZRN3-203ENST00000462146 TCF7L2Q9NQB0 619 aa12.01□□□□□ -0.49
PDZRN3-203ENST00000462146 TXNDC16Q9P2K2 825 aa12.01□□□□□ -0.49
PDZRN3-203ENST00000462146 USP3Q9Y6I4 520 aa12.01□□□□□ -0.49
PDZRN3-203ENST00000462146 SYNJ2BP-COX16A0A087WUM0 186 aa12□□□□□ -0.49
PDZRN3-203ENST00000462146 A0A087WZ62 844 aa12□□□□□ -0.49
PDZRN3-203ENST00000462146 AP1G1O43747 822 aa12□□□□□ -0.49
PDZRN3-203ENST00000462146 CLPTM1O96005 669 aa12□□□□□ -0.49
PDZRN3-203ENST00000462146 JUNP05412 331 aaKnown RBP12□□□□□ -0.49
PDZRN3-203ENST00000462146 MYL4P12829 197 aa12□□□□□ -0.49
PDZRN3-203ENST00000462146 MX2P20592 715 aa12□□□□□ -0.49
PDZRN3-203ENST00000462146 GLDCP23378 1020 aa12□□□□□ -0.49
PDZRN3-203ENST00000462146 PITX1P78337 314 aaPredicted RBP12□□□□□ -0.49
PDZRN3-203ENST00000462146 MYLK3Q32MK0 819 aa12□□□□□ -0.49
PDZRN3-203ENST00000462146 TREML2Q5T2D2 321 aa12□□□□□ -0.49
PDZRN3-203ENST00000462146 CYS1Q717R9 158 aa12□□□□□ -0.49
PDZRN3-203ENST00000462146 DSELQ8IZU8 1212 aa12□□□□□ -0.49
PDZRN3-203ENST00000462146 C7orf31Q8N865 590 aa12□□□□□ -0.49
PDZRN3-203ENST00000462146 OR52K1Q8NGK4 314 aa12□□□□□ -0.49
PDZRN3-203ENST00000462146 SLC35F5Q8WV83 523 aa12□□□□□ -0.49
PDZRN3-203ENST00000462146 RCN3Q96D15 328 aa12□□□□□ -0.49
PDZRN3-203ENST00000462146 P2RY11Q96G91 374 aa12□□□□□ -0.49
PDZRN3-203ENST00000462146 PHF12Q96QT6 1004 aa12□□□□□ -0.49
PDZRN3-203ENST00000462146 PRPF18Q99633 342 aaKnown RBP12□□□□□ -0.49
PDZRN3-203ENST00000462146 FDXACB1Q9BRP7 624 aaPredicted RBP12□□□□□ -0.49
PDZRN3-203ENST00000462146 PAPPA2Q9BXP8 1791 aa12□□□□□ -0.49
PDZRN3-203ENST00000462146 VRTNQ9H8Y1 702 aa12□□□□□ -0.49
PDZRN3-203ENST00000462146 DPP3Q9NY33 737 aa12□□□□□ -0.49
PDZRN3-203ENST00000462146 GGA3Q9NZ52 723 aa12□□□□□ -0.49
PDZRN3-203ENST00000462146 COX16Q9P0S2 106 aa12□□□□□ -0.49
PDZRN3-203ENST00000462146 RIMS3Q9UJD0 308 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms