RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	ADGRF1	Q5T601	910 aa		13.15	□□□□□ -0.3
FDPS-204	ENST00000461507	RAP1GAP2	Q684P5	730 aa		13.15	□□□□□ -0.3
FDPS-204	ENST00000461507	BEND5	Q7L4P6	421 aa		13.15	□□□□□ -0.3
FDPS-204	ENST00000461507	VPS36	Q86VN1	386 aa		13.15	□□□□□ -0.3
FDPS-204	ENST00000461507	EMC1	Q8N766	993 aa		13.15	□□□□□ -0.3
FDPS-204	ENST00000461507	WFIKKN2	Q8TEU8	576 aa		13.15	□□□□□ -0.3
FDPS-204	ENST00000461507	AZIN2	Q96A70	460 aa		13.15	□□□□□ -0.3
FDPS-204	ENST00000461507	IQCD	Q96DY2	449 aa		13.15	□□□□□ -0.3
FDPS-204	ENST00000461507	TMA16	Q96EY4	203 aa	Known RBP	13.15	□□□□□ -0.3
FDPS-204	ENST00000461507	FCRL2	Q96LA5	508 aa	Predicted RBP	13.15	□□□□□ -0.3
FDPS-204	ENST00000461507	EDEM3	Q9BZQ6	932 aa		13.15	□□□□□ -0.3
FDPS-204	ENST00000461507	MKRN2	Q9H000	416 aa	Known RBP	13.15	□□□□□ -0.3
FDPS-204	ENST00000461507	WASF3	Q9UPY6	502 aa		13.15	□□□□□ -0.3
FDPS-204	ENST00000461507		A0A1W2PQJ5	194 aa		13.14	□□□□□ -0.31
FDPS-204	ENST00000461507	GIPC1	O14908	333 aa		13.14	□□□□□ -0.31
FDPS-204	ENST00000461507	SLC2A3	P11169	496 aa		13.14	□□□□□ -0.31
FDPS-204	ENST00000461507	KCNA4	P22459	653 aa		13.14	□□□□□ -0.31
FDPS-204	ENST00000461507	MMP8	P22894	467 aa		13.14	□□□□□ -0.31
FDPS-204	ENST00000461507	PRKCH	P24723	683 aa		13.14	□□□□□ -0.31
FDPS-204	ENST00000461507	CD6	P30203	668 aa		13.14	□□□□□ -0.31
FDPS-204	ENST00000461507	CASP14	P31944	242 aa		13.14	□□□□□ -0.31
FDPS-204	ENST00000461507	CCR1	P32246	355 aa		13.14	□□□□□ -0.31
FDPS-204	ENST00000461507	GABRB2	P47870	512 aa		13.14	□□□□□ -0.31
FDPS-204	ENST00000461507	COPA	P53621	1224 aa		13.14	□□□□□ -0.31
FDPS-204	ENST00000461507	ZBED6	P86452	979 aa		13.14	□□□□□ -0.31
FDPS-204	ENST00000461507	ATP11A	P98196	1134 aa		13.14	□□□□□ -0.31
FDPS-204	ENST00000461507	ZNF252P-AS1	Q0IIN9	211 aa		13.14	□□□□□ -0.31
FDPS-204	ENST00000461507	SEMA3B	Q13214	749 aa		13.14	□□□□□ -0.31
FDPS-204	ENST00000461507	TSR1	Q2NL82	804 aa	Known RBP	13.14	□□□□□ -0.31
FDPS-204	ENST00000461507	FAM133B	Q5BKY9	247 aa	Known RBP	13.14	□□□□□ -0.31
FDPS-204	ENST00000461507	FIGN	Q5HY92	759 aa		13.14	□□□□□ -0.31
FDPS-204	ENST00000461507	SH3PXD2A	Q5TCZ1	1133 aa		13.14	□□□□□ -0.31
FDPS-204	ENST00000461507	E4F1	Q66K89	784 aa	Predicted RBP	13.14	□□□□□ -0.31
FDPS-204	ENST00000461507	KIAA1324	Q6UXG2	1013 aa	Known RBP	13.14	□□□□□ -0.31
FDPS-204	ENST00000461507	IRF2BP2	Q7Z5L9	587 aa		13.14	□□□□□ -0.31
FDPS-204	ENST00000461507	PIP4P1	Q86T03	277 aa		13.14	□□□□□ -0.31
FDPS-204	ENST00000461507	LGI2	Q8N0V4	545 aa		13.14	□□□□□ -0.31
FDPS-204	ENST00000461507	CARNMT1	Q8N4J0	409 aa		13.14	□□□□□ -0.31
FDPS-204	ENST00000461507	FOXJ1	Q92949	421 aa		13.14	□□□□□ -0.31
FDPS-204	ENST00000461507	ERLEC1	Q96DZ1	483 aa		13.14	□□□□□ -0.31
FDPS-204	ENST00000461507	HSPA12B	Q96MM6	686 aa		13.14	□□□□□ -0.31
FDPS-204	ENST00000461507	CFAP57	Q96MR6	1250 aa		13.14	□□□□□ -0.31
FDPS-204	ENST00000461507	TBCB	Q99426	244 aa		13.14	□□□□□ -0.31
FDPS-204	ENST00000461507	TTYH3	Q9C0H2	523 aa		13.14	□□□□□ -0.31
FDPS-204	ENST00000461507	NUCKS1	Q9H1E3	243 aa	Known RBP	13.14	□□□□□ -0.31
FDPS-204	ENST00000461507	PRDM16	Q9HAZ2	1276 aa		13.14	□□□□□ -0.31
FDPS-204	ENST00000461507	ITM2C	Q9NQX7	267 aa		13.14	□□□□□ -0.31
FDPS-204	ENST00000461507	WSB2	Q9NYS7	404 aa	Predicted RBP	13.14	□□□□□ -0.31
FDPS-204	ENST00000461507	RRN3	Q9NYV6	651 aa		13.14	□□□□□ -0.31
FDPS-204	ENST00000461507	SUSD2	Q9UGT4	822 aa		13.14	□□□□□ -0.31
FDPS-204	ENST00000461507		F5H5T6	163 aa		13.13	□□□□□ -0.31
FDPS-204	ENST00000461507	GYPC	P04921	128 aa		13.13	□□□□□ -0.31
FDPS-204	ENST00000461507	KRT3	P12035	628 aa		13.13	□□□□□ -0.31
FDPS-204	ENST00000461507	UNG	P13051	313 aa	Predicted RBP	13.13	□□□□□ -0.31
FDPS-204	ENST00000461507	DES	P17661	470 aa		13.13	□□□□□ -0.31
FDPS-204	ENST00000461507	TACR2	P21452	398 aa		13.13	□□□□□ -0.31
FDPS-204	ENST00000461507	SDC4	P31431	198 aa		13.13	□□□□□ -0.31
FDPS-204	ENST00000461507	FLT3	P36888	993 aa		13.13	□□□□□ -0.31
FDPS-204	ENST00000461507	GGCX	P38435	758 aa		13.13	□□□□□ -0.31
FDPS-204	ENST00000461507	PBX1	P40424	430 aa		13.13	□□□□□ -0.31
FDPS-204	ENST00000461507	SGSH	P51688	502 aa		13.13	□□□□□ -0.31
FDPS-204	ENST00000461507	CAMK2G	Q13555	558 aa	Predicted RBP	13.13	□□□□□ -0.31
FDPS-204	ENST00000461507	TRIM14	Q14142	442 aa		13.13	□□□□□ -0.31
FDPS-204	ENST00000461507	SPECC1L	Q69YQ0	1117 aa		13.13	□□□□□ -0.31
FDPS-204	ENST00000461507	ACAD10	Q6JQN1	1059 aa		13.13	□□□□□ -0.31
FDPS-204	ENST00000461507	DCUN1D2	Q6PH85	259 aa		13.13	□□□□□ -0.31
FDPS-204	ENST00000461507	ZNF571	Q7Z3V5	609 aa	Predicted RBP	13.13	□□□□□ -0.31
FDPS-204	ENST00000461507	TMC6	Q7Z403	805 aa		13.13	□□□□□ -0.31
FDPS-204	ENST00000461507	ADIPOR2	Q86V24	386 aa		13.13	□□□□□ -0.31
FDPS-204	ENST00000461507	MFN1	Q8IWA4	741 aa		13.13	□□□□□ -0.31
FDPS-204	ENST00000461507	AHI1	Q8N157	1196 aa		13.13	□□□□□ -0.31
FDPS-204	ENST00000461507	CFAP52	Q8N1V2	620 aa		13.13	□□□□□ -0.31
FDPS-204	ENST00000461507	ZNF557	Q8N988	423 aa	Predicted RBP	13.13	□□□□□ -0.31
FDPS-204	ENST00000461507	HJURP	Q8NCD3	748 aa	Predicted RBP	13.13	□□□□□ -0.31
FDPS-204	ENST00000461507	CADM4	Q8NFZ8	388 aa		13.13	□□□□□ -0.31
FDPS-204	ENST00000461507	DNASE2B	Q8WZ79	361 aa		13.13	□□□□□ -0.31
FDPS-204	ENST00000461507	SLC39A13	Q96H72	371 aa		13.13	□□□□□ -0.31
FDPS-204	ENST00000461507	LMLN	Q96KR4	655 aa		13.13	□□□□□ -0.31
FDPS-204	ENST00000461507	BTN2A3P	Q96KV6	586 aa		13.13	□□□□□ -0.31
FDPS-204	ENST00000461507	MCEE	Q96PE7	176 aa		13.13	□□□□□ -0.31
FDPS-204	ENST00000461507	CIPC	Q9C0C6	399 aa		13.13	□□□□□ -0.31
FDPS-204	ENST00000461507	SIK2	Q9H0K1	926 aa		13.13	□□□□□ -0.31
FDPS-204	ENST00000461507	PCED1A	Q9H1Q7	454 aa		13.13	□□□□□ -0.31
FDPS-204	ENST00000461507	TMEM245	Q9H330	911 aa		13.13	□□□□□ -0.31
FDPS-204	ENST00000461507	DEF6	Q9H4E7	631 aa		13.13	□□□□□ -0.31
FDPS-204	ENST00000461507	WDCP	Q9H6R7	721 aa		13.13	□□□□□ -0.31
FDPS-204	ENST00000461507	FBRS	Q9HAH7	460 aa		13.13	□□□□□ -0.31
FDPS-204	ENST00000461507	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	13.13	□□□□□ -0.31
FDPS-204	ENST00000461507	TAS2R14	Q9NYV8	317 aa		13.13	□□□□□ -0.31
FDPS-204	ENST00000461507	AIPL1	Q9NZN9	384 aa		13.13	□□□□□ -0.31
FDPS-204	ENST00000461507	XPO7	Q9UIA9	1087 aa	Known RBP	13.13	□□□□□ -0.31
FDPS-204	ENST00000461507	PAXBP1	Q9Y5B6	917 aa		13.13	□□□□□ -0.31
FDPS-204	ENST00000461507	NUMA1	Q14980	2115 aa		13.13	□□□□□ -0.31
FDPS-204	ENST00000461507	IGF2R	P11717	2491 aa		13.13	□□□□□ -0.31
FDPS-204	ENST00000461507	ITIH6	Q6UXX5	1313 aa		13.13	□□□□□ -0.31
FDPS-204	ENST00000461507	ARHGAP33	O14559	1287 aa		13.12	□□□□□ -0.31
FDPS-204	ENST00000461507	ATMIN	O43313	823 aa	Predicted RBP	13.12	□□□□□ -0.31
FDPS-204	ENST00000461507	GJB3	O75712	270 aa		13.12	□□□□□ -0.31
FDPS-204	ENST00000461507	SERPING1	P05155	500 aa		13.12	□□□□□ -0.31
FDPS-204	ENST00000461507	CFI	P05156	583 aa		13.12	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms