RNA–Protein interactions for RNA: ENST00000459249.1

RNU6ATAC28P-201, Transcript of RNA, U6atac small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6ATAC28P, Length 118 nt, Biotype snRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6ATAC28P-201ENST00000459249 CCDC40Q4G0X9 1142 aa4.9□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 CBWD6Q4V339 395 aa4.9□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 CBWD3Q5JTY5 395 aa4.9□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 CBWD5Q5RIA9 395 aa4.9□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 CYP4A22Q5TCH4 519 aa4.9□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 TCERG1LQ5VWI1 586 aa4.9□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 ISM2Q6H9L7 571 aa4.9□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 FOXR1Q6PIV2 292 aa4.9□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 TRIM67Q6ZTA4 783 aa4.9□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 FRMD7Q6ZUT3 714 aa4.9□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 MTSS1LQ765P7 747 aa4.9□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 GET4Q7L5D6 327 aaPredicted RBP4.9□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 DNAJB7Q7Z6W7 309 aaPredicted RBP4.9□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 PTRH1Q86Y79 214 aaKnown RBP4.9□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 SPATA2LQ8IUW3 424 aaPredicted RBP4.9□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 CRYBG2Q8N1P7 616 aa4.9□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 TTC9BQ8N6N2 239 aa4.9□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 B3GALNT2Q8NCR0 500 aa4.9□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 RNF141Q8WVD5 230 aa4.9□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 SEMA4DQ92854 862 aa4.9□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 FGF13Q92913 245 aa4.9□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 GTPBP3Q969Y2 492 aaKnown RBP4.9□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 MYLPFQ96A32 169 aa4.9□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 EEF2KMTQ96G04 330 aa4.9□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 KLHDC7BQ96G42 594 aa4.9□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 PCED1BQ96HM7 432 aa4.9□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 ZC3H10Q96K80 434 aaKnown RBP4.9□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 SPATA17Q96L03 361 aa4.9□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 MYRFLQ96LU7 910 aa4.9□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 FANCD2OSQ96PS1 177 aa4.9□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 MED15Q96RN5 788 aa4.9□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 SERINC2Q96SA4 455 aa4.9□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 MMS19Q96T76 1030 aa4.9□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 TTLL2Q9BWV7 592 aa4.9□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 C1QTNF1Q9BXJ1 281 aa4.9□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 ELOVL4Q9GZR5 314 aa4.9□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 DNAI2Q9GZS0 605 aa4.9□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 SDCBP2Q9H190 292 aa4.9□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 SNX25Q9H3E2 840 aa4.9□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 THAP9Q9H5L6 903 aa4.9□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 SMYD3Q9H7B4 428 aa4.9□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 TRPV4Q9HBA0 871 aa4.9□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 APOBEC3GQ9HC16 384 aaKnown RBP4.9□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 ASAH2Q9NR71 780 aa4.9□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 RAD18Q9NS91 495 aa4.9□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 TMLHEQ9NVH6 421 aa4.9□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 GPATCH2Q9NW75 528 aa4.9□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 HCFC1R1Q9NWW0 138 aa4.9□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 EHD2Q9NZN4 543 aa4.9□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 UXTQ9UBK9 157 aaPredicted RBP4.9□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 NXF1Q9UBU9 619 aaKnown RBP4.9□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 GTF3C4Q9UKN8 822 aa4.9□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 TPX2Q9ULW0 747 aaKnown RBP4.9□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 GPR52Q9Y2T5 361 aa4.9□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 GPR55Q9Y2T6 319 aaPredicted RBP4.9□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 NME7Q9Y5B8 376 aa4.9□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 NCANO14594 1321 aa4.9□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 ATP8B3O60423 1300 aa4.9□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 XIRP2A4UGR9 3374 aa4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 NOTCH4Q99466 2003 aa4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 CCDC66A2RUB6 948 aa4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 GTPBP10A4D1E9 387 aaKnown RBP4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 MEGF11A6BM72 1044 aa4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 A8MXQ7 604 aa4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 ARNTLO00327 626 aa4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 HCRTO43612 131 aa4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 ATP2C2O75185 946 aa4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 H2AFYO75367 372 aaKnown RBP4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 ECI2O75521 394 aa4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 AFPP02771 609 aaKnown RBP4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 VDRP11473 427 aa4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 HMGA1P17096 107 aaKnown RBP4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 CEBPBP17676 345 aa4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 PFKLP17858 780 aa4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 TRIM21P19474 475 aaKnown RBP4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 AGXTP21549 392 aa4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 TBXAS1P24557 533 aaPredicted RBP4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 ACAT1P24752 427 aaKnown RBP4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 CYP2F1P24903 491 aa4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 DDX6P26196 483 aaKnown RBP eCLIP4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 ADH6P28332 368 aa4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 CDC25CP30307 473 aa4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 CCR2P41597 374 aa4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 MTNR1BP49286 362 aa4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 AGFG1P52594 562 aaKnown RBP4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 CDH8P55286 799 aa4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 STX17P56962 302 aa4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 PSMC1P62191 440 aaKnown RBP4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 YWHAEP62258 255 aaKnown RBP4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 NTHL1P78549 312 aa4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 ZXDAP98168 799 aa4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 POU4F1Q01851 419 aa4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 GCNT1Q02742 428 aa4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 SIGLEC14Q08ET2 396 aa4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 CETN1Q12798 172 aa4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 KCNAB2Q13303 367 aa4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 TDGQ13569 410 aa4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 CUL2Q13617 745 aa4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 CCDC142Q17RM4 750 aa4.89□□□□□ -1.63
RNU6ATAC28P-201ENST00000459249 SLC5A9Q2M3M2 681 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms