RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 BRMS1LQ5PSV4 323 aa18.15■□□□□ 0.5
NUP50-208ENST00000430547 FAM124AQ86V42 546 aa18.15■□□□□ 0.5
NUP50-208ENST00000430547 CIR1Q86X95 450 aaPredicted RBP18.15■□□□□ 0.5
NUP50-208ENST00000430547 SLC20A1Q8WUM9 679 aa18.15■□□□□ 0.5
NUP50-208ENST00000430547 ZNF419Q96HQ0 510 aaPredicted RBP18.15■□□□□ 0.5
NUP50-208ENST00000430547 LMLNQ96KR4 655 aa18.15■□□□□ 0.5
NUP50-208ENST00000430547 PPP1R9BQ96SB3 815 aa18.15■□□□□ 0.5
NUP50-208ENST00000430547 NPY6RQ99463 290 aa18.15■□□□□ 0.5
NUP50-208ENST00000430547 PRMT1Q99873 361 aaKnown RBP18.15■□□□□ 0.5
NUP50-208ENST00000430547 SIK2Q9H0K1 926 aa18.15■□□□□ 0.5
NUP50-208ENST00000430547 PRSS16Q9NQE7 514 aa18.15■□□□□ 0.5
NUP50-208ENST00000430547 PIGVQ9NUD9 493 aa18.15■□□□□ 0.5
NUP50-208ENST00000430547 TMEM63CQ9P1W3 806 aa18.15■□□□□ 0.5
NUP50-208ENST00000430547 INTS6Q9UL03 887 aaKnown RBP18.15■□□□□ 0.5
NUP50-208ENST00000430547 VANGL2Q9ULK5 521 aa18.15■□□□□ 0.5
NUP50-208ENST00000430547 SLC6A14Q9UN76 642 aa18.15■□□□□ 0.5
NUP50-208ENST00000430547 ERVW-1Q9UQF0 538 aa18.15■□□□□ 0.5
NUP50-208ENST00000430547 SIK3Q9Y2K2 1263 aa18.15■□□□□ 0.5
NUP50-208ENST00000430547 EPHB6O15197 1021 aa18.14■□□□□ 0.49
NUP50-208ENST00000430547 RNASEH1O60930 286 aaKnown RBP18.14■□□□□ 0.49
NUP50-208ENST00000430547 PAGE1O75459 146 aa18.14■□□□□ 0.49
NUP50-208ENST00000430547 SERPINF2P08697 491 aa18.14■□□□□ 0.49
NUP50-208ENST00000430547 ENGP17813 658 aa18.14■□□□□ 0.49
NUP50-208ENST00000430547 NNMTP40261 264 aa18.14■□□□□ 0.49
NUP50-208ENST00000430547 MAPK8P45983 427 aa18.14■□□□□ 0.49
NUP50-208ENST00000430547 JAM2P57087 298 aa18.14■□□□□ 0.49
NUP50-208ENST00000430547 ECT2LQ008S8 904 aa18.14■□□□□ 0.49
NUP50-208ENST00000430547 CENPCQ03188 943 aa18.14■□□□□ 0.49
NUP50-208ENST00000430547 ZBTB16Q05516 673 aa18.14■□□□□ 0.49
NUP50-208ENST00000430547 AUHQ13825 339 aaKnown RBP18.14■□□□□ 0.49
NUP50-208ENST00000430547 UAP1L1Q3KQV9 507 aa18.14■□□□□ 0.49
NUP50-208ENST00000430547 SLC25A52Q3SY17 297 aa18.14■□□□□ 0.49
NUP50-208ENST00000430547 ANO6Q4KMQ2 910 aa18.14■□□□□ 0.49
NUP50-208ENST00000430547 C2CD6Q53TS8 623 aa18.14■□□□□ 0.49
NUP50-208ENST00000430547 ZNF776Q68DI1 518 aaPredicted RBP18.14■□□□□ 0.49
NUP50-208ENST00000430547 FBXL22Q6P050 247 aa18.14■□□□□ 0.49
NUP50-208ENST00000430547 LRSAM1Q6UWE0 723 aa18.14■□□□□ 0.49
NUP50-208ENST00000430547 TRIM72Q6ZMU5 477 aa18.14■□□□□ 0.49
NUP50-208ENST00000430547 KDM1BQ8NB78 822 aa18.14■□□□□ 0.49
NUP50-208ENST00000430547 CADM4Q8NFZ8 388 aa18.14■□□□□ 0.49
NUP50-208ENST00000430547 TKTL2Q9H0I9 626 aa18.14■□□□□ 0.49
NUP50-208ENST00000430547 NOCTQ9UK39 431 aaKnown RBP18.14■□□□□ 0.49
NUP50-208ENST00000430547 HS3ST4Q9Y661 456 aa18.14■□□□□ 0.49
NUP50-208ENST00000430547 CNOT1A5YKK6 2376 aaKnown RBP18.13■□□□□ 0.49
NUP50-208ENST00000430547 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.13■□□□□ 0.49
NUP50-208ENST00000430547 IGLV3-19P01714 112 aa18.13■□□□□ 0.49
NUP50-208ENST00000430547 PDGFRAP16234 1089 aa18.13■□□□□ 0.49
NUP50-208ENST00000430547 ZNF18P17022 549 aa18.13■□□□□ 0.49
NUP50-208ENST00000430547 SULT2A1Q06520 285 aa18.13■□□□□ 0.49
NUP50-208ENST00000430547 ZNF177Q13360 481 aaPredicted RBP18.13■□□□□ 0.49
NUP50-208ENST00000430547 HNRNPA1L2Q32P51 320 aaKnown RBP18.13■□□□□ 0.49
NUP50-208ENST00000430547 CAVIN1Q6NZI2 390 aaKnown RBP18.13■□□□□ 0.49
NUP50-208ENST00000430547 DHX40Q8IX18 779 aaKnown RBP18.13■□□□□ 0.49
NUP50-208ENST00000430547 APCDD1Q8J025 514 aa18.13■□□□□ 0.49
NUP50-208ENST00000430547 PGAP3Q96FM1 320 aaPredicted RBP18.13■□□□□ 0.49
NUP50-208ENST00000430547 ERGIC2Q96RQ1 377 aa18.13■□□□□ 0.49
NUP50-208ENST00000430547 TBCBQ99426 244 aa18.13■□□□□ 0.49
NUP50-208ENST00000430547 GTPBP2Q9BX10 602 aaKnown RBP18.13■□□□□ 0.49
NUP50-208ENST00000430547 NUMA1Q14980 2115 aa18.13■□□□□ 0.49
NUP50-208ENST00000430547 DOCK4Q8N1I0 1966 aa18.12■□□□□ 0.49
NUP50-208ENST00000430547 EDDM13A0A1B0GTR0 161 aa18.12■□□□□ 0.49
NUP50-208ENST00000430547 SMTNL1A8MU46 457 aa18.12■□□□□ 0.49
NUP50-208ENST00000430547 SIN3BO75182 1162 aa18.12■□□□□ 0.49
NUP50-208ENST00000430547 SYPP08247 313 aa18.12■□□□□ 0.49
NUP50-208ENST00000430547 TFE3P19532 575 aaPredicted RBP18.12■□□□□ 0.49
NUP50-208ENST00000430547 FLT3P36888 993 aa18.12■□□□□ 0.49
NUP50-208ENST00000430547 GGCXP38435 758 aa18.12■□□□□ 0.49
NUP50-208ENST00000430547 CTSOP43234 321 aaPredicted RBP18.12■□□□□ 0.49
NUP50-208ENST00000430547 CXCR3P49682 368 aa18.12■□□□□ 0.49
NUP50-208ENST00000430547 RPS14P62263 151 aaKnown RBP18.12■□□□□ 0.49
NUP50-208ENST00000430547 FMO1Q01740 532 aa18.12■□□□□ 0.49
NUP50-208ENST00000430547 SFSWAPQ12872 951 aaKnown RBP18.12■□□□□ 0.49
NUP50-208ENST00000430547 NCAPHQ15003 741 aa18.12■□□□□ 0.49
NUP50-208ENST00000430547 ACBD5Q5T8D3 534 aaPredicted RBP18.12■□□□□ 0.49
NUP50-208ENST00000430547 DCAF12L1Q5VU92 463 aa18.12■□□□□ 0.49
NUP50-208ENST00000430547 OTUD1Q5VV17 481 aaPredicted RBP18.12■□□□□ 0.49
NUP50-208ENST00000430547 LRRC31Q6UY01 552 aa18.12■□□□□ 0.49
NUP50-208ENST00000430547 GANCQ8TET4 914 aa18.12■□□□□ 0.49
NUP50-208ENST00000430547 SNX19Q92543 992 aa18.12■□□□□ 0.49
NUP50-208ENST00000430547 IGSF8Q969P0 613 aa18.12■□□□□ 0.49
NUP50-208ENST00000430547 NT5C3BQ969T7 300 aa18.12■□□□□ 0.49
NUP50-208ENST00000430547 MYO19Q96H55 970 aa18.12■□□□□ 0.49
NUP50-208ENST00000430547 RPL10LQ96L21 214 aaKnown RBP18.12■□□□□ 0.49
NUP50-208ENST00000430547 MRGPRX3Q96LB0 322 aa18.12■□□□□ 0.49
NUP50-208ENST00000430547 MIR1-1HGQ9H1L0 117 aa18.12■□□□□ 0.49
NUP50-208ENST00000430547 METTL5Q9NRN9 209 aaKnown RBP18.12■□□□□ 0.49
NUP50-208ENST00000430547 SEPT11Q9NVA2 429 aaKnown RBP18.12■□□□□ 0.49
NUP50-208ENST00000430547 ARHGEF38Q9NXL2 777 aa18.12■□□□□ 0.49
NUP50-208ENST00000430547 SLC25A13Q9UJS0 675 aa18.12■□□□□ 0.49
NUP50-208ENST00000430547 SCML1Q9UN30 329 aa18.12■□□□□ 0.49
NUP50-208ENST00000430547 NCKAP1Q9Y2A7 1128 aa18.12■□□□□ 0.49
NUP50-208ENST00000430547 PCDH15Q96QU1 1955 aa18.11■□□□□ 0.49
NUP50-208ENST00000430547 TARSL2A2RTX5 802 aaKnown RBP18.11■□□□□ 0.49
NUP50-208ENST00000430547 LRRC10BA6NIK2 292 aa18.11■□□□□ 0.49
NUP50-208ENST00000430547 TTC34A8MYJ7 566 aa18.11■□□□□ 0.49
NUP50-208ENST00000430547 CDX4O14627 284 aaPredicted RBP18.11■□□□□ 0.49
NUP50-208ENST00000430547 TM4SF5O14894 197 aa18.11■□□□□ 0.49
NUP50-208ENST00000430547 CLDN11O75508 207 aa18.11■□□□□ 0.49
NUP50-208ENST00000430547 ADCY5O95622 1261 aa18.11■□□□□ 0.49
NUP50-208ENST00000430547 CYP1A1P04798 512 aaPredicted RBP18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms