RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 BNC2Q6ZN30 1099 aaPredicted RBP18.82■□□□□ 0.6
SHANK3-202ENST00000414786 GAS2L1Q99501 681 aaPredicted RBP18.82■□□□□ 0.6
SHANK3-202ENST00000414786 VPS33BQ9H267 617 aa18.82■□□□□ 0.6
SHANK3-202ENST00000414786 SNX12Q9UMY4 172 aa18.82■□□□□ 0.6
SHANK3-202ENST00000414786 DDX3XO00571 662 aaKnown RBP eCLIP18.82■□□□□ 0.6
SHANK3-202ENST00000414786 ZBTB22O15209 634 aa18.82■□□□□ 0.6
SHANK3-202ENST00000414786 ZBTB14O43829 449 aa18.82■□□□□ 0.6
SHANK3-202ENST00000414786 CTPS1P17812 591 aa18.82■□□□□ 0.6
SHANK3-202ENST00000414786 KCTD21Q4G0X4 260 aa18.82■□□□□ 0.6
SHANK3-202ENST00000414786 FBXO30Q8TB52 745 aa18.82■□□□□ 0.6
SHANK3-202ENST00000414786 TLL1O43897 1013 aa18.82■□□□□ 0.6
SHANK3-202ENST00000414786 CCT3P49368 545 aaKnown RBP18.82■□□□□ 0.6
SHANK3-202ENST00000414786 MPZL3Q6UWV2 235 aa18.82■□□□□ 0.6
SHANK3-202ENST00000414786 ARMC8Q8IUR7 673 aa18.82■□□□□ 0.6
SHANK3-202ENST00000414786 INMTO95050 263 aa18.81■□□□□ 0.6
SHANK3-202ENST00000414786 H2AFXP16104 143 aaPredicted RBP18.81■□□□□ 0.6
SHANK3-202ENST00000414786 OR6K2Q8NGY2 324 aa18.81■□□□□ 0.6
SHANK3-202ENST00000414786 CNPY3Q9BT09 278 aa18.81■□□□□ 0.6
SHANK3-202ENST00000414786 CCDC167Q9P0B6 97 aa18.81■□□□□ 0.6
SHANK3-202ENST00000414786 PTCH1Q13635 1447 aa18.81■□□□□ 0.6
SHANK3-202ENST00000414786 TMEM114B3SHH9 223 aa18.81■□□□□ 0.6
SHANK3-202ENST00000414786 GRIK4Q16099 956 aa18.81■□□□□ 0.6
SHANK3-202ENST00000414786 PACS2Q86VP3 889 aa18.81■□□□□ 0.6
SHANK3-202ENST00000414786 GAL3ST1Q99999 423 aa18.81■□□□□ 0.6
SHANK3-202ENST00000414786 TNFRSF21O75509 655 aa18.81■□□□□ 0.6
SHANK3-202ENST00000414786 ARP10275 920 aa18.81■□□□□ 0.6
SHANK3-202ENST00000414786 TFDP3Q5H9I0 405 aa18.81■□□□□ 0.6
SHANK3-202ENST00000414786 REXO1L1PQ8IX06 675 aa18.81■□□□□ 0.6
SHANK3-202ENST00000414786 FBXO39Q8N4B4 442 aa18.81■□□□□ 0.6
SHANK3-202ENST00000414786 TRPV3Q8NET8 790 aa18.81■□□□□ 0.6
SHANK3-202ENST00000414786 KPNA6O60684 536 aa18.81■□□□□ 0.6
SHANK3-202ENST00000414786 CYP2A6P11509 494 aaPredicted RBP18.81■□□□□ 0.6
SHANK3-202ENST00000414786 NTSP30990 170 aa18.81■□□□□ 0.6
SHANK3-202ENST00000414786 ABL2P42684 1182 aa18.81■□□□□ 0.6
SHANK3-202ENST00000414786 CDH8P55286 799 aa18.81■□□□□ 0.6
SHANK3-202ENST00000414786 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.81■□□□□ 0.6
SHANK3-202ENST00000414786 DPP7Q9UHL4 492 aa18.81■□□□□ 0.6
SHANK3-202ENST00000414786 TIMM8BQ9Y5J9 83 aaPredicted RBP18.81■□□□□ 0.6
SHANK3-202ENST00000414786 EFCAB10A6NFE3 127 aa18.81■□□□□ 0.6
SHANK3-202ENST00000414786 PDE5AO76074 875 aa18.81■□□□□ 0.6
SHANK3-202ENST00000414786 LRATO95237 230 aa18.81■□□□□ 0.6
SHANK3-202ENST00000414786 MGAT1P26572 445 aa18.81■□□□□ 0.6
SHANK3-202ENST00000414786 EID3Q8N140 333 aa18.81■□□□□ 0.6
SHANK3-202ENST00000414786 NAXEQ8NCW5 288 aa18.81■□□□□ 0.6
SHANK3-202ENST00000414786 JMJD4Q9H9V9 463 aa18.81■□□□□ 0.6
SHANK3-202ENST00000414786 ZNF232Q9UNY5 417 aa18.81■□□□□ 0.6
SHANK3-202ENST00000414786 RASGRP1O95267 797 aa18.81■□□□□ 0.6
SHANK3-202ENST00000414786 BCAT1P54687 386 aa18.81■□□□□ 0.6
SHANK3-202ENST00000414786 LSM3P62310 102 aaKnown RBP18.81■□□□□ 0.6
SHANK3-202ENST00000414786 FCHO2Q0JRZ9 810 aa18.81■□□□□ 0.6
SHANK3-202ENST00000414786 CRY1Q16526 586 aa18.81■□□□□ 0.6
SHANK3-202ENST00000414786 PMF1Q6P1K2 205 aa18.81■□□□□ 0.6
SHANK3-202ENST00000414786 FBXO42Q6P3S6 717 aa18.81■□□□□ 0.6
SHANK3-202ENST00000414786 HGH1Q9BTY7 390 aa18.81■□□□□ 0.6
SHANK3-202ENST00000414786 KLQ9UEF7 1012 aa18.81■□□□□ 0.6
SHANK3-202ENST00000414786 ANO9A1A5B4 782 aa18.8■□□□□ 0.6
SHANK3-202ENST00000414786 MTSS1O43312 755 aa18.8■□□□□ 0.6
SHANK3-202ENST00000414786 NOS1APO75052 506 aaPredicted RBP18.8■□□□□ 0.6
SHANK3-202ENST00000414786 SCNN1AP37088 669 aa18.8■□□□□ 0.6
SHANK3-202ENST00000414786 HPCAL1P37235 193 aa18.8■□□□□ 0.6
SHANK3-202ENST00000414786 SLC45A4Q5BKX6 768 aa18.8■□□□□ 0.6
SHANK3-202ENST00000414786 METTL6Q8TCB7 284 aa18.8■□□□□ 0.6
SHANK3-202ENST00000414786 POMKQ9H5K3 350 aa18.8■□□□□ 0.6
SHANK3-202ENST00000414786 PHF11Q9UIL8 331 aa18.8■□□□□ 0.6
SHANK3-202ENST00000414786 PSTPIP1O43586 416 aa18.8■□□□□ 0.6
SHANK3-202ENST00000414786 TBL1XO60907 577 aa18.8■□□□□ 0.6
SHANK3-202ENST00000414786 LSP1P33241 339 aa18.8■□□□□ 0.6
SHANK3-202ENST00000414786 CACNA2D1P54289 1103 aa18.8■□□□□ 0.6
SHANK3-202ENST00000414786 IQSEC1Q6DN90 963 aa18.8■□□□□ 0.6
SHANK3-202ENST00000414786 FAM129CQ86XR2 697 aa18.8■□□□□ 0.6
SHANK3-202ENST00000414786 EFCAB1Q9HAE3 211 aa18.8■□□□□ 0.6
SHANK3-202ENST00000414786 ING3Q9NXR8 418 aa18.8■□□□□ 0.6
SHANK3-202ENST00000414786 TMEM150BA6NC51 233 aa18.8■□□□□ 0.6
SHANK3-202ENST00000414786 AMPD1P23109 780 aa18.8■□□□□ 0.6
SHANK3-202ENST00000414786 FANCEQ9HB96 536 aa18.8■□□□□ 0.6
SHANK3-202ENST00000414786 STK39Q9UEW8 545 aa18.8■□□□□ 0.6
SHANK3-202ENST00000414786 PTPRKQ15262 1439 aa18.8■□□□□ 0.6
SHANK3-202ENST00000414786 GLRA3O75311 464 aa18.8■□□□□ 0.6
SHANK3-202ENST00000414786 KIRREL3Q8IZU9 778 aa18.8■□□□□ 0.6
SHANK3-202ENST00000414786 H3BMM5 538 aa18.8■□□□□ 0.6
SHANK3-202ENST00000414786 UQCRBP14927 111 aa18.8■□□□□ 0.6
SHANK3-202ENST00000414786 TTC7BQ86TV6 843 aa18.8■□□□□ 0.6
SHANK3-202ENST00000414786 VPS33AQ96AX1 596 aa18.8■□□□□ 0.6
SHANK3-202ENST00000414786 MTG1Q9BT17 334 aaPredicted RBP18.8■□□□□ 0.6
SHANK3-202ENST00000414786 ZFP14Q9HCL3 533 aa18.8■□□□□ 0.6
SHANK3-202ENST00000414786 RABGEF1Q9UJ41 708 aa18.8■□□□□ 0.6
SHANK3-202ENST00000414786 RPA3P35244 121 aaPredicted RBP18.8■□□□□ 0.6
SHANK3-202ENST00000414786 LHX1P48742 406 aa18.8■□□□□ 0.6
SHANK3-202ENST00000414786 PSEN2P49810 448 aa18.8■□□□□ 0.6
SHANK3-202ENST00000414786 PREPLQ4J6C6 727 aaPredicted RBP18.8■□□□□ 0.6
SHANK3-202ENST00000414786 ZBTB49Q6ZSB9 765 aa18.8■□□□□ 0.6
SHANK3-202ENST00000414786 TIPINQ9BVW5 301 aa18.8■□□□□ 0.6
SHANK3-202ENST00000414786 OMPP47874 163 aa18.79■□□□□ 0.6
SHANK3-202ENST00000414786 METTL21CQ5VZV1 264 aa18.79■□□□□ 0.6
SHANK3-202ENST00000414786 FAM98AQ8NCA5 519 aaKnown RBP18.79■□□□□ 0.6
SHANK3-202ENST00000414786 KPNA5O15131 536 aa18.79■□□□□ 0.6
SHANK3-202ENST00000414786 CDC40O60508 579 aaKnown RBP eCLIP18.79■□□□□ 0.65e-8■■■■□ 25.9
SHANK3-202ENST00000414786 HOXC12P31275 282 aa18.79■□□□□ 0.6
SHANK3-202ENST00000414786 MASP1P48740 699 aa18.79■□□□□ 0.6
SHANK3-202ENST00000414786 HK2P52789 917 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms