RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 NHSL2Q5HYW2 709 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 ATXN7L2Q5T6C5 722 aaPredicted RBP5.23□□□□□ -1.57
GABPB1-204ENST00000396464 FCRL6Q6DN72 434 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 TTI2Q6NXR4 508 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 KLHL35Q6PF15 583 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 CHST9Q7L1S5 443 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 TRIM48Q8IWZ4 208 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 PQLC1Q8N2U9 271 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 HDDC3Q8N4P3 179 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 DENND6BQ8NEG7 585 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 SETD6Q8TBK2 473 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 ZCCHC10Q8TBK6 192 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 PHOSPHO1Q8TCT1 267 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 DUSP19Q8WTR2 217 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 VPS50Q96JG6 964 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 CMTM3Q96MX0 182 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 NAA11Q9BSU3 229 aaPredicted RBP5.23□□□□□ -1.57
GABPB1-204ENST00000396464 MS4A7Q9GZW8 240 aaPredicted RBP5.23□□□□□ -1.57
GABPB1-204ENST00000396464 PCED1AQ9H1Q7 454 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 KAT14Q9H8E8 782 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 MRPL44Q9H9J2 332 aaKnown RBP5.23□□□□□ -1.57
GABPB1-204ENST00000396464 PFDN4Q9NQP4 134 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 FSCN3Q9NQT6 498 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 ZBTB40Q9NUA8 1239 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 ANO10Q9NW15 660 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 ZSCAN32Q9NX65 697 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 SIDT1Q9NXL6 827 aaKnown RBP5.23□□□□□ -1.57
GABPB1-204ENST00000396464 LIPT1Q9Y234 373 aa5.23□□□□□ -1.57
GABPB1-204ENST00000396464 A0A0A6YYK5 440 aaPredicted RBP5.22□□□□□ -1.57
GABPB1-204ENST00000396464 RNF103-CHMP3A0A140T963 221 aa5.22□□□□□ -1.57
GABPB1-204ENST00000396464 ARHGEF37A1IGU5 675 aa5.22□□□□□ -1.57
GABPB1-204ENST00000396464 LRRD1A4D1F6 860 aa5.22□□□□□ -1.57
GABPB1-204ENST00000396464 OR2W5A6NFC9 320 aa5.22□□□□□ -1.57
GABPB1-204ENST00000396464 PRSS29PA6NIE9 313 aa5.22□□□□□ -1.57
GABPB1-204ENST00000396464 RNF103O00237 685 aa5.22□□□□□ -1.57
GABPB1-204ENST00000396464 DNM1LO00429 736 aa5.22□□□□□ -1.57
GABPB1-204ENST00000396464 ZNF263O14978 683 aa5.22□□□□□ -1.57
GABPB1-204ENST00000396464 MCF2LO15068 1137 aa5.22□□□□□ -1.57
GABPB1-204ENST00000396464 BCAT2O15382 392 aaPredicted RBP5.22□□□□□ -1.57
GABPB1-204ENST00000396464 GPR42O15529 346 aa5.22□□□□□ -1.57
GABPB1-204ENST00000396464 TULP3O75386 442 aa5.22□□□□□ -1.57
GABPB1-204ENST00000396464 VIPP01282 170 aa5.22□□□□□ -1.57
GABPB1-204ENST00000396464 TUBBP07437 444 aa5.22□□□□□ -1.57
GABPB1-204ENST00000396464 ARP10275 920 aa5.22□□□□□ -1.57
GABPB1-204ENST00000396464 TPH1P17752 444 aa5.22□□□□□ -1.57
GABPB1-204ENST00000396464 TYMPP19971 482 aa5.22□□□□□ -1.57
GABPB1-204ENST00000396464 MCM3P25205 808 aa5.22□□□□□ -1.57
GABPB1-204ENST00000396464 TMOD1P28289 359 aa5.22□□□□□ -1.57
GABPB1-204ENST00000396464 PCSK1P29120 753 aa5.22□□□□□ -1.57
GABPB1-204ENST00000396464 SLC5A2P31639 672 aa5.22□□□□□ -1.57
GABPB1-204ENST00000396464 SREBF1P36956 1147 aa5.22□□□□□ -1.57
GABPB1-204ENST00000396464 MATR3P43243 847 aaKnown RBP eCLIP5.22□□□□□ -1.57
GABPB1-204ENST00000396464 RABIFP47224 123 aa5.22□□□□□ -1.57
GABPB1-204ENST00000396464 LUMP51884 338 aaPredicted RBP5.22□□□□□ -1.57
GABPB1-204ENST00000396464 CDH8P55286 799 aa5.22□□□□□ -1.57
GABPB1-204ENST00000396464 PER3P56645 1201 aa5.22□□□□□ -1.57
GABPB1-204ENST00000396464 WNT3AP56704 352 aa5.22□□□□□ -1.57
GABPB1-204ENST00000396464 TGFB2P61812 414 aa5.22□□□□□ -1.57
GABPB1-204ENST00000396464 RPL7AP62424 266 aaKnown RBP5.22□□□□□ -1.57
GABPB1-204ENST00000396464 POU6F2P78424 691 aaPredicted RBP5.22□□□□□ -1.57
GABPB1-204ENST00000396464 MECOMQ03112 1051 aa5.22□□□□□ -1.57
GABPB1-204ENST00000396464 DMTNQ08495 405 aa5.22□□□□□ -1.57
GABPB1-204ENST00000396464 MTM1Q13496 603 aa5.22□□□□□ -1.57
GABPB1-204ENST00000396464 ARHGEF7Q14155 803 aa5.22□□□□□ -1.57
GABPB1-204ENST00000396464 DCAF17Q5H9S7 520 aaPredicted RBP5.22□□□□□ -1.57
GABPB1-204ENST00000396464 VASNQ6EMK4 673 aa5.22□□□□□ -1.57
GABPB1-204ENST00000396464 DRICH1Q6PGQ1 229 aaPredicted RBP5.22□□□□□ -1.57
GABPB1-204ENST00000396464 CRIP3Q6Q6R5 217 aa5.22□□□□□ -1.57
GABPB1-204ENST00000396464 WDR63Q8IWG1 891 aa5.22□□□□□ -1.57
GABPB1-204ENST00000396464 SYCP3Q8IZU3 236 aa5.22□□□□□ -1.57
GABPB1-204ENST00000396464 ANKRD44Q8N8A2 993 aa5.22□□□□□ -1.57
GABPB1-204ENST00000396464 FAM71DQ8N9W8 422 aa5.22□□□□□ -1.57
GABPB1-204ENST00000396464 HMGB4Q8WW32 186 aa5.22□□□□□ -1.57
GABPB1-204ENST00000396464 KCNE4Q8WWG9 221 aa5.22□□□□□ -1.57
GABPB1-204ENST00000396464 ZCCHC14Q8WYQ9 949 aaKnown RBP5.22□□□□□ -1.57
GABPB1-204ENST00000396464 RAPGEF4Q8WZA2 1011 aa5.22□□□□□ -1.57
GABPB1-204ENST00000396464 GRAMD1AQ96CP6 724 aa5.22□□□□□ -1.57
GABPB1-204ENST00000396464 MBD6Q96DN6 1003 aa5.22□□□□□ -1.57
GABPB1-204ENST00000396464 CDCA5Q96FF9 252 aa5.22□□□□□ -1.57
GABPB1-204ENST00000396464 NLRP4Q96MN2 994 aa5.22□□□□□ -1.57
GABPB1-204ENST00000396464 GSDMAQ96QA5 445 aa5.22□□□□□ -1.57
GABPB1-204ENST00000396464 UHRF1Q96T88 793 aaPredicted RBP5.22□□□□□ -1.57
GABPB1-204ENST00000396464 SOX7Q9BT81 388 aa5.22□□□□□ -1.57
GABPB1-204ENST00000396464 TAOK3Q9H2K8 898 aa5.22□□□□□ -1.57
GABPB1-204ENST00000396464 UNKLQ9H9P5 680 aaKnown RBP5.22□□□□□ -1.57
GABPB1-204ENST00000396464 ZBTB26Q9HCK0 441 aa5.22□□□□□ -1.57
GABPB1-204ENST00000396464 POLR3BQ9NW08 1133 aaPredicted RBP5.22□□□□□ -1.57
GABPB1-204ENST00000396464 BEX4Q9NWD9 120 aaPredicted RBP5.22□□□□□ -1.57
GABPB1-204ENST00000396464 CHCHD3Q9NX63 227 aaKnown RBP5.22□□□□□ -1.57
GABPB1-204ENST00000396464 PPP1R14DQ9NXH3 145 aa5.22□□□□□ -1.57
GABPB1-204ENST00000396464 FETUBQ9UGM5 382 aa5.22□□□□□ -1.57
GABPB1-204ENST00000396464 IL19Q9UHD0 177 aa5.22□□□□□ -1.57
GABPB1-204ENST00000396464 AURKCQ9UQB9 309 aa5.22□□□□□ -1.57
GABPB1-204ENST00000396464 GPR75-ASB3A0A0A6YYF3 556 aa5.21□□□□□ -1.58
GABPB1-204ENST00000396464 LOC102723971A0A1B0GUV8 181 aa5.21□□□□□ -1.58
GABPB1-204ENST00000396464 CLRN2A0PK11 232 aa5.21□□□□□ -1.58
GABPB1-204ENST00000396464 FRMD3A2A2Y4 597 aa5.21□□□□□ -1.58
GABPB1-204ENST00000396464 KIF28PB7ZC32 967 aa5.21□□□□□ -1.58
GABPB1-204ENST00000396464 CTDSP2O14595 271 aa5.21□□□□□ -1.58
GABPB1-204ENST00000396464 PRAMEF4O60810 478 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms