RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 TYW5A2RUC4 315 aaKnown RBP14.28□□□□□ -0.12
CXCL12-202ENST00000374426 WNT9AO14904 365 aa14.28□□□□□ -0.12
CXCL12-202ENST00000374426 PMM2O15305 246 aa14.28□□□□□ -0.12
CXCL12-202ENST00000374426 FLNBO75369 2602 aaKnown RBP14.28□□□□□ -0.12
CXCL12-202ENST00000374426 RNASEH2AO75792 299 aaKnown RBP14.28□□□□□ -0.12
CXCL12-202ENST00000374426 SLC8A1P32418 973 aa14.28□□□□□ -0.12
CXCL12-202ENST00000374426 NNTQ13423 1086 aa14.28□□□□□ -0.12
CXCL12-202ENST00000374426 SHBQ15464 509 aa14.28□□□□□ -0.12
CXCL12-202ENST00000374426 STILQ15468 1287 aa14.28□□□□□ -0.12
CXCL12-202ENST00000374426 DCAF6Q58WW2 860 aa14.28□□□□□ -0.12
CXCL12-202ENST00000374426 PITRM1Q5JRX3 1037 aa14.28□□□□□ -0.12
CXCL12-202ENST00000374426 SCUBE3Q8IX30 993 aa14.28□□□□□ -0.12
CXCL12-202ENST00000374426 AADATQ8N5Z0 425 aa14.28□□□□□ -0.12
CXCL12-202ENST00000374426 PDCD7Q8N8D1 485 aaKnown RBP14.28□□□□□ -0.12
CXCL12-202ENST00000374426 OR2T34Q8NGX1 318 aa14.28□□□□□ -0.12
CXCL12-202ENST00000374426 ADAM32Q8TC27 787 aa14.28□□□□□ -0.12
CXCL12-202ENST00000374426 SERPINB11Q96P15 392 aa14.28□□□□□ -0.12
CXCL12-202ENST00000374426 BBC3Q96PG8 261 aaPredicted RBP14.28□□□□□ -0.12
CXCL12-202ENST00000374426 FAM129BQ96TA1 746 aa14.28□□□□□ -0.12
CXCL12-202ENST00000374426 METTL14Q9HCE5 456 aaKnown RBP14.28□□□□□ -0.12
CXCL12-202ENST00000374426 XPO7Q9UIA9 1087 aaKnown RBP14.28□□□□□ -0.12
CXCL12-202ENST00000374426 SLCO3A1Q9UIG8 710 aa14.28□□□□□ -0.12
CXCL12-202ENST00000374426 FZD4Q9ULV1 537 aa14.28□□□□□ -0.12
CXCL12-202ENST00000374426 ERVW-1Q9UQF0 538 aa14.28□□□□□ -0.12
CXCL12-202ENST00000374426 CFAP46Q8IYW2 2715 aa14.27□□□□□ -0.12
CXCL12-202ENST00000374426 ITIH6Q6UXX5 1313 aa14.27□□□□□ -0.12
CXCL12-202ENST00000374426 A0A087WV48 116 aa14.27□□□□□ -0.13
CXCL12-202ENST00000374426 A0A1W2PR77 199 aa14.27□□□□□ -0.13
CXCL12-202ENST00000374426 TARSL2A2RTX5 802 aaKnown RBP14.27□□□□□ -0.13
CXCL12-202ENST00000374426 LRRC72A6NJI9 287 aa14.27□□□□□ -0.13
CXCL12-202ENST00000374426 CBX4O00257 560 aa14.27□□□□□ -0.13
CXCL12-202ENST00000374426 LUC7L3O95232 432 aaKnown RBP14.27□□□□□ -0.13
CXCL12-202ENST00000374426 MOCS2O96007 188 aaPredicted RBP14.27□□□□□ -0.13
CXCL12-202ENST00000374426 SRPRAP08240 638 aaKnown RBP14.27□□□□□ -0.13
CXCL12-202ENST00000374426 GPD2P43304 727 aa14.27□□□□□ -0.13
CXCL12-202ENST00000374426 RPL34P49207 117 aaKnown RBP14.27□□□□□ -0.13
CXCL12-202ENST00000374426 ECT2LQ008S8 904 aa14.27□□□□□ -0.13
CXCL12-202ENST00000374426 SFSWAPQ12872 951 aaKnown RBP14.27□□□□□ -0.13
CXCL12-202ENST00000374426 SYPL2Q5VXT5 272 aa14.27□□□□□ -0.13
CXCL12-202ENST00000374426 RRAGAQ7L523 313 aa14.27□□□□□ -0.13
CXCL12-202ENST00000374426 TAC4Q86UU9 113 aa14.27□□□□□ -0.13
CXCL12-202ENST00000374426 TMPRSS12Q86WS5 348 aa14.27□□□□□ -0.13
CXCL12-202ENST00000374426 APCDD1Q8J025 514 aa14.27□□□□□ -0.13
CXCL12-202ENST00000374426 SAP25Q8TEE9 199 aa14.27□□□□□ -0.13
CXCL12-202ENST00000374426 FAM149B1Q96BN6 582 aa14.27□□□□□ -0.13
CXCL12-202ENST00000374426 OMDQ99983 421 aa14.27□□□□□ -0.13
CXCL12-202ENST00000374426 AASDHPPTQ9NRN7 309 aa14.27□□□□□ -0.13
CXCL12-202ENST00000374426 TP53BP1Q12888 1972 aaPredicted RBP14.27□□□□□ -0.13
CXCL12-202ENST00000374426 COL5A1P20908 1838 aaPredicted RBP14.27□□□□□ -0.13
CXCL12-202ENST00000374426 PTPRQQ9UMZ3 2332 aa14.26□□□□□ -0.13
CXCL12-202ENST00000374426 ARID1BQ8NFD5 2236 aaPredicted RBP14.26□□□□□ -0.13
CXCL12-202ENST00000374426 EDDM13A0A1B0GTR0 161 aa14.26□□□□□ -0.13
CXCL12-202ENST00000374426 ENC1O14682 589 aa14.26□□□□□ -0.13
CXCL12-202ENST00000374426 SMC2O95347 1197 aa14.26□□□□□ -0.13
CXCL12-202ENST00000374426 CD38P28907 300 aa14.26□□□□□ -0.13
CXCL12-202ENST00000374426 PSMD8P48556 350 aa14.26□□□□□ -0.13
CXCL12-202ENST00000374426 CCR5P51681 352 aa14.26□□□□□ -0.13
CXCL12-202ENST00000374426 ADPRHP54922 357 aa14.26□□□□□ -0.13
CXCL12-202ENST00000374426 CLDN6P56747 220 aa14.26□□□□□ -0.13
CXCL12-202ENST00000374426 DNAJC3Q13217 504 aa14.26□□□□□ -0.13
CXCL12-202ENST00000374426 ARHGEF19Q8IW93 802 aa14.26□□□□□ -0.13
CXCL12-202ENST00000374426 CCDC117Q8IWD4 279 aaPredicted RBP14.26□□□□□ -0.13
CXCL12-202ENST00000374426 LGI2Q8N0V4 545 aa14.26□□□□□ -0.13
CXCL12-202ENST00000374426 STK40Q8N2I9 435 aa14.26□□□□□ -0.13
CXCL12-202ENST00000374426 PTPRN2Q92932 1015 aa14.26□□□□□ -0.13
CXCL12-202ENST00000374426 SKA1Q96BD8 255 aa14.26□□□□□ -0.13
CXCL12-202ENST00000374426 CRELD1Q96HD1 420 aa14.26□□□□□ -0.13
CXCL12-202ENST00000374426 RPL10LQ96L21 214 aaKnown RBP14.26□□□□□ -0.13
CXCL12-202ENST00000374426 ST7Q9NRC1 585 aa14.26□□□□□ -0.13
CXCL12-202ENST00000374426 PCDHGA1Q9Y5H4 931 aa14.26□□□□□ -0.13
CXCL12-202ENST00000374426 E9PAM4 449 aa14.25□□□□□ -0.13
CXCL12-202ENST00000374426 PLK4O00444 970 aa14.25□□□□□ -0.13
CXCL12-202ENST00000374426 PSMA7O14818 248 aa14.25□□□□□ -0.13
CXCL12-202ENST00000374426 SART1O43290 800 aaKnown RBP14.25□□□□□ -0.13
CXCL12-202ENST00000374426 MOCS3O95396 460 aa14.25□□□□□ -0.13
CXCL12-202ENST00000374426 ITGAVP06756 1048 aa14.25□□□□□ -0.13
CXCL12-202ENST00000374426 VAV1P15498 845 aa14.25□□□□□ -0.13
CXCL12-202ENST00000374426 CD44P16070 742 aaKnown RBP14.25□□□□□ -0.13
CXCL12-202ENST00000374426 GOT1P17174 413 aa14.25□□□□□ -0.13
CXCL12-202ENST00000374426 ABCB4P21439 1286 aa14.25□□□□□ -0.13
CXCL12-202ENST00000374426 TACR2P21452 398 aa14.25□□□□□ -0.13
CXCL12-202ENST00000374426 C5AR1P21730 350 aa14.25□□□□□ -0.13
CXCL12-202ENST00000374426 NUMBP49757 651 aa14.25□□□□□ -0.13
CXCL12-202ENST00000374426 STK19P49842 368 aaPredicted RBP14.25□□□□□ -0.13
CXCL12-202ENST00000374426 GCNT1Q02742 428 aa14.25□□□□□ -0.13
CXCL12-202ENST00000374426 CCDC40Q4G0X9 1142 aa14.25□□□□□ -0.13
CXCL12-202ENST00000374426 ZC3H12AQ5D1E8 599 aaKnown RBP14.25□□□□□ -0.13
CXCL12-202ENST00000374426 RAP1GAP2Q684P5 730 aa14.25□□□□□ -0.13
CXCL12-202ENST00000374426 BEND5Q7L4P6 421 aa14.25□□□□□ -0.13
CXCL12-202ENST00000374426 OR14C36Q8NHC7 312 aa14.25□□□□□ -0.13
CXCL12-202ENST00000374426 SMARCE1Q969G3 411 aa14.25□□□□□ -0.13
CXCL12-202ENST00000374426 SERAC1Q96JX3 654 aa14.25□□□□□ -0.13
CXCL12-202ENST00000374426 CNDP2Q96KP4 475 aaKnown RBP14.25□□□□□ -0.13
CXCL12-202ENST00000374426 CEP63Q96MT8 703 aa14.25□□□□□ -0.13
CXCL12-202ENST00000374426 KREMEN1Q96MU8 473 aa14.25□□□□□ -0.13
CXCL12-202ENST00000374426 GDF3Q9NR23 364 aa14.25□□□□□ -0.13
CXCL12-202ENST00000374426 CEP83Q9Y592 693 aa14.25□□□□□ -0.13
CXCL12-202ENST00000374426 MGAQ8IWI9 3026 aa14.24□□□□□ -0.13
CXCL12-202ENST00000374426 TLR4O00206 839 aa14.24□□□□□ -0.13
CXCL12-202ENST00000374426 P4HA2O15460 535 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms