RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 DDI1Q8WTU0 396 aa11.26□□□□□ -0.61
BRCC3-204ENST00000369462 CELF6Q96J87 481 aaKnown RBP11.26□□□□□ -0.61
BRCC3-204ENST00000369462 PRDM16Q9HAZ2 1276 aa11.26□□□□□ -0.61
BRCC3-204ENST00000369462 TRPV4Q9HBA0 871 aa11.26□□□□□ -0.61
BRCC3-204ENST00000369462 PLK2Q9NYY3 685 aa11.26□□□□□ -0.61
BRCC3-204ENST00000369462 TBC1D14Q9P2M4 693 aa11.26□□□□□ -0.61
BRCC3-204ENST00000369462 CCDC188H7C350 402 aa11.26□□□□□ -0.61
BRCC3-204ENST00000369462 FCARP24071 287 aa11.26□□□□□ -0.61
BRCC3-204ENST00000369462 OR1E1P30953 314 aa11.26□□□□□ -0.61
BRCC3-204ENST00000369462 SERPINB6P35237 376 aa11.26□□□□□ -0.61
BRCC3-204ENST00000369462 KCNJ1P48048 391 aa11.26□□□□□ -0.61
BRCC3-204ENST00000369462 PAFAH1B3Q15102 231 aaKnown RBP11.26□□□□□ -0.61
BRCC3-204ENST00000369462 CCNG2Q16589 344 aa11.26□□□□□ -0.61
BRCC3-204ENST00000369462 B4GALNT4Q76KP1 1039 aa11.26□□□□□ -0.61
BRCC3-204ENST00000369462 CPXM2Q8N436 756 aa11.26□□□□□ -0.61
BRCC3-204ENST00000369462 NOA1Q8NC60 698 aaKnown RBP11.26□□□□□ -0.61
BRCC3-204ENST00000369462 LRRN4Q8WUT4 740 aa11.26□□□□□ -0.61
BRCC3-204ENST00000369462 RPGRIP1Q96KN7 1286 aa11.26□□□□□ -0.61
BRCC3-204ENST00000369462 KRT12Q99456 494 aa11.26□□□□□ -0.61
BRCC3-204ENST00000369462 DNPEPQ9ULA0 475 aa11.26□□□□□ -0.61
BRCC3-204ENST00000369462 HELZP42694 1942 aaKnown RBP11.25□□□□□ -0.61
BRCC3-204ENST00000369462 NUP205Q92621 2012 aa11.25□□□□□ -0.61
BRCC3-204ENST00000369462 TYW5A2RUC4 315 aaKnown RBP11.25□□□□□ -0.61
BRCC3-204ENST00000369462 GFRA2O00451 464 aa11.25□□□□□ -0.61
BRCC3-204ENST00000369462 TBL1XO60907 577 aa11.25□□□□□ -0.61
BRCC3-204ENST00000369462 NR2C2P49116 596 aa11.25□□□□□ -0.61
BRCC3-204ENST00000369462 NOMO1Q15155 1222 aa11.25□□□□□ -0.61
BRCC3-204ENST00000369462 KCTD19Q17RG1 926 aaPredicted RBP11.25□□□□□ -0.61
BRCC3-204ENST00000369462 ADGRG2Q8IZP9 1017 aa11.25□□□□□ -0.61
BRCC3-204ENST00000369462 P2RY11Q96G91 374 aa11.25□□□□□ -0.61
BRCC3-204ENST00000369462 ZFYVE19Q96K21 471 aa11.25□□□□□ -0.61
BRCC3-204ENST00000369462 LRRC19Q9H756 370 aa11.25□□□□□ -0.61
BRCC3-204ENST00000369462 HOMER3Q9NSC5 361 aa11.25□□□□□ -0.61
BRCC3-204ENST00000369462 TMEM248Q9NWD8 314 aa11.25□□□□□ -0.61
BRCC3-204ENST00000369462 ZNF212Q9UDV6 495 aa11.25□□□□□ -0.61
BRCC3-204ENST00000369462 A0A1B0GVM2 712 aa11.25□□□□□ -0.61
BRCC3-204ENST00000369462 TCAF2A6NFQ2 919 aa11.25□□□□□ -0.61
BRCC3-204ENST00000369462 WASH4PA8MWX3 477 aa11.25□□□□□ -0.61
BRCC3-204ENST00000369462 SLC9A3R1O14745 358 aaPredicted RBP11.25□□□□□ -0.61
BRCC3-204ENST00000369462 MBTPS2O43462 519 aa11.25□□□□□ -0.61
BRCC3-204ENST00000369462 LIASO43766 372 aa11.25□□□□□ -0.61
BRCC3-204ENST00000369462 PHF2O75151 1096 aa11.25□□□□□ -0.61
BRCC3-204ENST00000369462 CLDN11O75508 207 aa11.25□□□□□ -0.61
BRCC3-204ENST00000369462 RBP3P10745 1247 aa11.25□□□□□ -0.61
BRCC3-204ENST00000369462 CDH4P55283 916 aa11.25□□□□□ -0.61
BRCC3-204ENST00000369462 EIF3EP60228 445 aaKnown RBP11.25□□□□□ -0.61
BRCC3-204ENST00000369462 MRPS25P82663 173 aaKnown RBP11.25□□□□□ -0.61
BRCC3-204ENST00000369462 SMAD4Q13485 552 aaKnown RBP11.25□□□□□ -0.61
BRCC3-204ENST00000369462 BYSLQ13895 437 aaKnown RBP11.25□□□□□ -0.61
BRCC3-204ENST00000369462 CYP1B1Q16678 543 aa11.25□□□□□ -0.61
BRCC3-204ENST00000369462 TTC27Q6P3X3 843 aa11.25□□□□□ -0.61
BRCC3-204ENST00000369462 CCDC137Q6PK04 289 aaKnown RBP11.25□□□□□ -0.61
BRCC3-204ENST00000369462 PARM1Q6UWI2 310 aa11.25□□□□□ -0.61
BRCC3-204ENST00000369462 OTOP3Q7RTS5 596 aa11.25□□□□□ -0.61
BRCC3-204ENST00000369462 TMEM25Q86YD3 366 aa11.25□□□□□ -0.61
BRCC3-204ENST00000369462 LZTR1Q8N653 840 aa11.25□□□□□ -0.61
BRCC3-204ENST00000369462 HJURPQ8NCD3 748 aaPredicted RBP11.25□□□□□ -0.61
BRCC3-204ENST00000369462 FGF14Q92915 247 aa11.25□□□□□ -0.61
BRCC3-204ENST00000369462 KXD1Q9BQD3 176 aa11.25□□□□□ -0.61
BRCC3-204ENST00000369462 KLC2Q9H0B6 622 aa11.25□□□□□ -0.61
BRCC3-204ENST00000369462 C10orf88Q9H8K7 445 aa11.25□□□□□ -0.61
BRCC3-204ENST00000369462 DUS2Q9NX74 493 aaKnown RBP11.25□□□□□ -0.61
BRCC3-204ENST00000369462 DONSONQ9NYP3 566 aa11.25□□□□□ -0.61
BRCC3-204ENST00000369462 DOCK4Q8N1I0 1966 aa11.24□□□□□ -0.61
BRCC3-204ENST00000369462 MCF2LO15068 1137 aa11.24□□□□□ -0.61
BRCC3-204ENST00000369462 CHRNA3P32297 505 aa11.24□□□□□ -0.61
BRCC3-204ENST00000369462 TTC39BQ5VTQ0 682 aaPredicted RBP11.24□□□□□ -0.61
BRCC3-204ENST00000369462 TRIM68Q6AZZ1 485 aa11.24□□□□□ -0.61
BRCC3-204ENST00000369462 VITQ6UXI7 678 aa11.24□□□□□ -0.61
BRCC3-204ENST00000369462 BZW1Q7L1Q6 419 aaKnown RBP11.24□□□□□ -0.61
BRCC3-204ENST00000369462 CCDC105Q8IYK2 499 aa11.24□□□□□ -0.61
BRCC3-204ENST00000369462 C12orf50Q8NA57 414 aaPredicted RBP11.24□□□□□ -0.61
BRCC3-204ENST00000369462 SLC35B2Q8TB61 432 aa11.24□□□□□ -0.61
BRCC3-204ENST00000369462 OSCP1Q8WVF1 389 aa11.24□□□□□ -0.61
BRCC3-204ENST00000369462 OTUB2Q96DC9 234 aa11.24□□□□□ -0.61
BRCC3-204ENST00000369462 OBP2AQ9NY56 170 aa11.24□□□□□ -0.61
BRCC3-204ENST00000369462 AMACRQ9UHK6 382 aa11.24□□□□□ -0.61
BRCC3-204ENST00000369462 ZNF148Q9UQR1 794 aa11.24□□□□□ -0.61
BRCC3-204ENST00000369462 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.24□□□□□ -0.61
BRCC3-204ENST00000369462 H7C0C1 242 aa11.24□□□□□ -0.61
BRCC3-204ENST00000369462 CYBBP04839 570 aa11.24□□□□□ -0.61
BRCC3-204ENST00000369462 COILP38432 576 aaPredicted RBP11.24□□□□□ -0.61
BRCC3-204ENST00000369462 ATP5OP48047 213 aa11.24□□□□□ -0.61
BRCC3-204ENST00000369462 NUMBP49757 651 aa11.24□□□□□ -0.61
BRCC3-204ENST00000369462 ZNF177Q13360 481 aaPredicted RBP11.24□□□□□ -0.61
BRCC3-204ENST00000369462 MPPE1Q53F39 396 aa11.24□□□□□ -0.61
BRCC3-204ENST00000369462 LY6G5CQ5SRR4 150 aa11.24□□□□□ -0.61
BRCC3-204ENST00000369462 ARHGAP12Q8IWW6 846 aa11.24□□□□□ -0.61
BRCC3-204ENST00000369462 UMODL1-AS1Q8N2C9 162 aa11.24□□□□□ -0.61
BRCC3-204ENST00000369462 CARNMT1Q8N4J0 409 aa11.24□□□□□ -0.61
BRCC3-204ENST00000369462 CCNYQ8ND76 341 aa11.24□□□□□ -0.61
BRCC3-204ENST00000369462 IRF7Q92985 503 aa11.24□□□□□ -0.61
BRCC3-204ENST00000369462 ASIC4Q96FT7 647 aa11.24□□□□□ -0.61
BRCC3-204ENST00000369462 LGMNQ99538 433 aa11.24□□□□□ -0.61
BRCC3-204ENST00000369462 TMEM121Q9BTD3 319 aa11.24□□□□□ -0.61
BRCC3-204ENST00000369462 RPP25Q9BUL9 199 aaKnown RBP11.24□□□□□ -0.61
BRCC3-204ENST00000369462 PLA2G2FQ9BZM2 168 aa11.24□□□□□ -0.61
BRCC3-204ENST00000369462 NOL6Q9H6R4 1146 aaKnown RBP11.24□□□□□ -0.61
BRCC3-204ENST00000369462 SPHK2Q9NRA0 654 aa11.24□□□□□ -0.61
BRCC3-204ENST00000369462 NUP210Q8TEM1 1887 aaPredicted RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms