RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 MOCS1Q9NZB8 636 aa18.23■□□□□ 0.51
APP-202ENST00000348990 RSL24D1Q9UHA3 163 aaKnown RBP18.23■□□□□ 0.51
APP-202ENST00000348990 STAMBPO95630 424 aa18.23■□□□□ 0.51
APP-202ENST00000348990 POLBP06746 335 aa18.23■□□□□ 0.51
APP-202ENST00000348990 IMPDH2P12268 514 aa18.23■□□□□ 0.51
APP-202ENST00000348990 TFE3P19532 575 aaPredicted RBP18.23■□□□□ 0.51
APP-202ENST00000348990 PHKA2P46019 1235 aa18.23■□□□□ 0.51
APP-202ENST00000348990 LPIN1Q14693 890 aa18.23■□□□□ 0.51
APP-202ENST00000348990 GOLGA7BQ2TAP0 167 aa18.23■□□□□ 0.51
APP-202ENST00000348990 LSM12Q3MHD2 195 aaKnown RBP18.23■□□□□ 0.51
APP-202ENST00000348990 ZBTB46Q86UZ6 589 aa18.23■□□□□ 0.51
APP-202ENST00000348990 HTR3CQ8WXA8 447 aa18.23■□□□□ 0.51
APP-202ENST00000348990 APOL2Q9BQE5 337 aa18.23■□□□□ 0.51
APP-202ENST00000348990 SLC39A10Q9ULF5 831 aa18.23■□□□□ 0.51
APP-202ENST00000348990 LTFP02788 710 aa18.22■□□□□ 0.51
APP-202ENST00000348990 CCDC166P0CW27 439 aa18.22■□□□□ 0.51
APP-202ENST00000348990 ACAT1P24752 427 aaKnown RBP18.22■□□□□ 0.51
APP-202ENST00000348990 GP5P40197 560 aa18.22■□□□□ 0.51
APP-202ENST00000348990 LAMTOR4Q0VGL1 99 aa18.22■□□□□ 0.51
APP-202ENST00000348990 CEACAM7Q14002 265 aa18.22■□□□□ 0.51
APP-202ENST00000348990 ITPRIPL1Q6GPH6 555 aa18.22■□□□□ 0.51
APP-202ENST00000348990 TIFABQ6ZNK6 161 aa18.22■□□□□ 0.51
APP-202ENST00000348990 ADCY4Q8NFM4 1077 aa18.22■□□□□ 0.51
APP-202ENST00000348990 GAB3Q8WWW8 586 aa18.22■□□□□ 0.51
APP-202ENST00000348990 EPB41L1Q9H4G0 881 aa18.22■□□□□ 0.51
APP-202ENST00000348990 CPSF3Q9UKF6 684 aaKnown RBP18.22■□□□□ 0.51
APP-202ENST00000348990 PCDHB12Q9Y5F1 795 aa18.22■□□□□ 0.51
APP-202ENST00000348990 FOXD2O60548 495 aaPredicted RBP18.22■□□□□ 0.51
APP-202ENST00000348990 PIGNO95427 931 aa18.22■□□□□ 0.51
APP-202ENST00000348990 AVPR1AP37288 418 aa18.22■□□□□ 0.51
APP-202ENST00000348990 NAGLUP54802 743 aa18.22■□□□□ 0.51
APP-202ENST00000348990 CDH15P55291 814 aa18.22■□□□□ 0.51
APP-202ENST00000348990 IGBP1P78318 339 aa18.22■□□□□ 0.51
APP-202ENST00000348990 IFRD2Q12894 506 aaPredicted RBP18.22■□□□□ 0.51
APP-202ENST00000348990 PTK2BQ14289 1009 aa18.22■□□□□ 0.51
APP-202ENST00000348990 KCTD21Q4G0X4 260 aa18.22■□□□□ 0.51
APP-202ENST00000348990 XRRA1Q6P2D8 792 aa18.22■□□□□ 0.51
APP-202ENST00000348990 EPGNQ6UW88 154 aa18.22■□□□□ 0.51
APP-202ENST00000348990 SENP6Q9GZR1 1112 aaPredicted RBP18.22■□□□□ 0.51
APP-202ENST00000348990 TMEM134Q9H6X4 195 aa18.22■□□□□ 0.51
APP-202ENST00000348990 TIMMDC1Q9NPL8 285 aa18.22■□□□□ 0.51
APP-202ENST00000348990 TLK1Q9UKI8 766 aa18.22■□□□□ 0.51
APP-202ENST00000348990 EP400Q96L91 3159 aa18.22■□□□□ 0.51
APP-202ENST00000348990 RBBP6Q7Z6E9 1792 aaKnown RBP18.22■□□□□ 0.51
APP-202ENST00000348990 MSCO60682 206 aa18.22■□□□□ 0.51
APP-202ENST00000348990 STXBP2Q15833 593 aa18.22■□□□□ 0.51
APP-202ENST00000348990 SH3D19Q5HYK7 790 aa18.22■□□□□ 0.51
APP-202ENST00000348990 ZFP1Q6P2D0 407 aa18.22■□□□□ 0.51
APP-202ENST00000348990 ZNF410Q86VK4 478 aa18.22■□□□□ 0.51
APP-202ENST00000348990 GRIN3AQ8TCU5 1115 aa18.22■□□□□ 0.51
APP-202ENST00000348990 TRAPPC12Q8WVT3 735 aa18.22■□□□□ 0.51
APP-202ENST00000348990 HPDLQ96IR7 371 aa18.22■□□□□ 0.51
APP-202ENST00000348990 PLEKHG4BQ96PX9 1271 aa18.22■□□□□ 0.51
APP-202ENST00000348990 GATA5Q9BWX5 397 aaPredicted RBP18.22■□□□□ 0.51
APP-202ENST00000348990 EFCAB1Q9HAE3 211 aa18.22■□□□□ 0.51
APP-202ENST00000348990 ZNF277Q9NRM2 450 aaPredicted RBP18.22■□□□□ 0.51
APP-202ENST00000348990 RRN3Q9NYV6 651 aa18.22■□□□□ 0.51
APP-202ENST00000348990 CNTNAP1P78357 1384 aa18.22■□□□□ 0.51
APP-202ENST00000348990 PSMB4P28070 264 aa18.21■□□□□ 0.51
APP-202ENST00000348990 SPRP35270 261 aaPredicted RBP18.21■□□□□ 0.51
APP-202ENST00000348990 ARL4AP40617 200 aa18.21■□□□□ 0.51
APP-202ENST00000348990 STT3AP46977 705 aa18.21■□□□□ 0.51
APP-202ENST00000348990 C1orf127Q8N9H9 656 aa18.21■□□□□ 0.51
APP-202ENST00000348990 FAM149B1Q96BN6 582 aa18.21■□□□□ 0.51
APP-202ENST00000348990 SGF29Q96ES7 293 aa18.21■□□□□ 0.51
APP-202ENST00000348990 ZNF512Q96ME7 567 aaPredicted RBP18.21■□□□□ 0.51
APP-202ENST00000348990 AGAP2Q99490 1192 aa18.21■□□□□ 0.51
APP-202ENST00000348990 PCDHAC1Q9H158 963 aa18.21■□□□□ 0.51
APP-202ENST00000348990 GGA3Q9NZ52 723 aa18.21■□□□□ 0.51
APP-202ENST00000348990 AP4E1Q9UPM8 1137 aa18.21■□□□□ 0.51
APP-202ENST00000348990 KCNK1O00180 336 aa18.21■□□□□ 0.51
APP-202ENST00000348990 VDRP11473 427 aa18.21■□□□□ 0.51
APP-202ENST00000348990 PTPN1P18031 435 aaKnown RBP18.21■□□□□ 0.51
APP-202ENST00000348990 HMGCS2P54868 508 aa18.21■□□□□ 0.51
APP-202ENST00000348990 CNTN2Q02246 1040 aa18.21■□□□□ 0.51
APP-202ENST00000348990 FSTL1Q12841 308 aa18.21■□□□□ 0.51
APP-202ENST00000348990 IL23RQ5VWK5 629 aa18.21■□□□□ 0.51
APP-202ENST00000348990 MAP1SQ66K74 1059 aaPredicted RBP18.21■□□□□ 0.51
APP-202ENST00000348990 ACOT1Q86TX2 421 aa18.21■□□□□ 0.51
APP-202ENST00000348990 VPS33BQ9H267 617 aa18.21■□□□□ 0.51
APP-202ENST00000348990 NMRAL1Q9HBL8 299 aa18.21■□□□□ 0.51
APP-202ENST00000348990 HESX1Q9UBX0 185 aa18.21■□□□□ 0.51
APP-202ENST00000348990 PRPF19Q9UMS4 504 aaKnown RBP18.21■□□□□ 0.51
APP-202ENST00000348990 LCP1P13796 627 aa18.21■□□□□ 0.5
APP-202ENST00000348990 PGAM1P18669 254 aa18.21■□□□□ 0.5
APP-202ENST00000348990 TPSB2P20231 275 aa18.21■□□□□ 0.5
APP-202ENST00000348990 TPSAB1Q15661 275 aa18.21■□□□□ 0.5
APP-202ENST00000348990 SLC44A4Q53GD3 710 aa18.21■□□□□ 0.5
APP-202ENST00000348990 KLHL35Q6PF15 583 aa18.21■□□□□ 0.5
APP-202ENST00000348990 CLVS1Q8IUQ0 354 aaPredicted RBP18.21■□□□□ 0.5
APP-202ENST00000348990 PYROXD2Q8N2H3 581 aa18.21■□□□□ 0.5
APP-202ENST00000348990 COQ10BQ9H8M1 238 aa18.21■□□□□ 0.5
APP-202ENST00000348990 FZD1Q9UP38 647 aa18.21■□□□□ 0.5
APP-202ENST00000348990 HES2Q9Y543 173 aa18.21■□□□□ 0.5
APP-202ENST00000348990 PAPSS1O43252 624 aaPredicted RBP18.2■□□□□ 0.5
APP-202ENST00000348990 RNASEH2AO75792 299 aaKnown RBP18.2■□□□□ 0.5
APP-202ENST00000348990 CDH2P19022 906 aaPredicted RBP18.2■□□□□ 0.5
APP-202ENST00000348990 HARS2P49590 506 aaKnown RBP18.2■□□□□ 0.5
APP-202ENST00000348990 CCDC153Q494R4 210 aa18.2■□□□□ 0.5
APP-202ENST00000348990 PMF1Q6P1K2 205 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 202 ms