RNA–Protein interactions for RNA: ENST00000286428.5

VBP1-201, Transcript of VHL binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VBP1, Length 1,686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-201ENST00000286428 XPO6Q96QU8 1125 aaKnown RBP19.45■□□□□ 0.7
VBP1-201ENST00000286428 SMC6Q96SB8 1091 aa19.45■□□□□ 0.7
VBP1-201ENST00000286428 EBNA1BP2Q99848 306 aaKnown RBP19.45■□□□□ 0.7
VBP1-201ENST00000286428 PRDM5Q9NQX1 630 aaPredicted RBP19.45■□□□□ 0.7
VBP1-201ENST00000286428 NKIRAS1Q9NYS0 192 aa19.45■□□□□ 0.7
VBP1-201ENST00000286428 HBS1LQ9Y450 684 aaKnown RBP19.45■□□□□ 0.7
VBP1-201ENST00000286428 MOCS2O96007 188 aaPredicted RBP19.44■□□□□ 0.7
VBP1-201ENST00000286428 URODP06132 367 aa19.44■□□□□ 0.7
VBP1-201ENST00000286428 RHOQP17081 205 aa19.44■□□□□ 0.7
VBP1-201ENST00000286428 VEPH1Q14D04 833 aa19.44■□□□□ 0.7
VBP1-201ENST00000286428 TAF12Q16514 161 aa19.44■□□□□ 0.7
VBP1-201ENST00000286428 LRRC26Q2I0M4 334 aa19.44■□□□□ 0.7
VBP1-201ENST00000286428 ANO4Q32M45 955 aa19.44■□□□□ 0.7
VBP1-201ENST00000286428 SNX30Q5VWJ9 437 aa19.44■□□□□ 0.7
VBP1-201ENST00000286428 TTC19Q6DKK2 380 aaPredicted RBP19.44■□□□□ 0.7
VBP1-201ENST00000286428 NPWQ8N729 165 aa19.44■□□□□ 0.7
VBP1-201ENST00000286428 GSDMBQ8TAX9 411 aa19.44■□□□□ 0.7
VBP1-201ENST00000286428 LRRN4Q8WUT4 740 aa19.44■□□□□ 0.7
VBP1-201ENST00000286428 ALKBH8Q96BT7 664 aaKnown RBP19.44■□□□□ 0.7
VBP1-201ENST00000286428 ZYG11BQ9C0D3 744 aa19.44■□□□□ 0.7
VBP1-201ENST00000286428 KCNK9Q9NPC2 374 aa19.44■□□□□ 0.7
VBP1-201ENST00000286428 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.44■□□□□ 0.7
VBP1-201ENST00000286428 RSPH14Q9UHP6 348 aa19.44■□□□□ 0.7
VBP1-201ENST00000286428 NUDT5Q9UKK9 219 aa19.44■□□□□ 0.7
VBP1-201ENST00000286428 SMG5Q9UPR3 1016 aaKnown RBP19.44■□□□□ 0.7
VBP1-201ENST00000286428 AAR2Q9Y312 384 aaKnown RBP19.44■□□□□ 0.7
VBP1-201ENST00000286428 KCNK1O00180 336 aa19.43■□□□□ 0.7
VBP1-201ENST00000286428 BANF1O75531 89 aa19.43■□□□□ 0.7
VBP1-201ENST00000286428 ABLIM3O94929 683 aa19.43■□□□□ 0.7
VBP1-201ENST00000286428 INHBAP08476 426 aa19.43■□□□□ 0.7
VBP1-201ENST00000286428 ELF1P32519 619 aa19.43■□□□□ 0.7
VBP1-201ENST00000286428 ATP5C1P36542 298 aaKnown RBP19.43■□□□□ 0.7
VBP1-201ENST00000286428 PGFP49763 221 aa19.43■□□□□ 0.7
VBP1-201ENST00000286428 NDST2P52849 883 aa19.43■□□□□ 0.7
VBP1-201ENST00000286428 KLHDC10Q6PID8 442 aa19.43■□□□□ 0.7
VBP1-201ENST00000286428 DDX53Q86TM3 631 aaKnown RBP19.43■□□□□ 0.7
VBP1-201ENST00000286428 PDCD7Q8N8D1 485 aaKnown RBP19.43■□□□□ 0.7
VBP1-201ENST00000286428 DYDC1Q8WWB3 177 aa19.43■□□□□ 0.7
VBP1-201ENST00000286428 SGSM3Q96HU1 749 aa19.43■□□□□ 0.7
VBP1-201ENST00000286428 PAFAH2Q99487 392 aa19.43■□□□□ 0.7
VBP1-201ENST00000286428 DHRS4Q9BTZ2 278 aa19.43■□□□□ 0.7
VBP1-201ENST00000286428 GBA3Q9H227 469 aa19.43■□□□□ 0.7
VBP1-201ENST00000286428 SSU72Q9NP77 194 aaKnown RBP19.43■□□□□ 0.7
VBP1-201ENST00000286428 CTNNAL1Q9UBT7 734 aa19.43■□□□□ 0.7
VBP1-201ENST00000286428 DNMT3LQ9UJW3 386 aa19.43■□□□□ 0.7
VBP1-201ENST00000286428 SNX10Q9Y5X0 201 aa19.43■□□□□ 0.7
VBP1-201ENST00000286428 FNDC1Q4ZHG4 1894 aaPredicted RBP19.43■□□□□ 0.7
VBP1-201ENST00000286428 TCRBV9S1A1TA0A576 114 aa19.43■□□□□ 0.7
VBP1-201ENST00000286428 SLC12A8A0AV02 714 aa19.43■□□□□ 0.7
VBP1-201ENST00000286428 ERICH4A6NGS2 130 aa19.43■□□□□ 0.7
VBP1-201ENST00000286428 NDUFAB1O14561 156 aa19.43■□□□□ 0.7
VBP1-201ENST00000286428 TLR5O60602 858 aa19.43■□□□□ 0.7
VBP1-201ENST00000286428 VNN2O95498 520 aa19.43■□□□□ 0.7
VBP1-201ENST00000286428 CSF2RAP15509 400 aa19.43■□□□□ 0.7
VBP1-201ENST00000286428 PSMB4P28070 264 aa19.43■□□□□ 0.7
VBP1-201ENST00000286428 WDR5P61964 334 aaKnown RBP19.43■□□□□ 0.7
VBP1-201ENST00000286428 RASIP1Q5U651 963 aa19.43■□□□□ 0.7
VBP1-201ENST00000286428 LINC00523Q86TU6 105 aa19.43■□□□□ 0.7
VBP1-201ENST00000286428 TRABD2AQ86V40 505 aa19.43■□□□□ 0.7
VBP1-201ENST00000286428 GPR152Q8TDT2 470 aa19.43■□□□□ 0.7
VBP1-201ENST00000286428 GIPC2Q8TF65 315 aa19.43■□□□□ 0.7
VBP1-201ENST00000286428 SIGLEC10Q96LC7 697 aa19.43■□□□□ 0.7
VBP1-201ENST00000286428 TEKT5Q96M29 485 aa19.43■□□□□ 0.7
VBP1-201ENST00000286428 NACA2Q9H009 215 aa19.43■□□□□ 0.7
VBP1-201ENST00000286428 CRISPLD1Q9H336 500 aa19.43■□□□□ 0.7
VBP1-201ENST00000286428 CCDC134Q9H6E4 229 aa19.43■□□□□ 0.7
VBP1-201ENST00000286428 PPANQ9NQ55 473 aaKnown RBP19.43■□□□□ 0.7
VBP1-201ENST00000286428 MAGED2Q9UNF1 606 aaPredicted RBP19.43■□□□□ 0.7
VBP1-201ENST00000286428 PCDHA11Q9Y5I1 949 aa19.43■□□□□ 0.7
VBP1-201ENST00000286428 MAD1L1Q9Y6D9 718 aa19.43■□□□□ 0.7
VBP1-201ENST00000286428 TMEM120BA0PK00 339 aa19.42■□□□□ 0.7
VBP1-201ENST00000286428 MAGEB16A2A368 324 aa19.42■□□□□ 0.7
VBP1-201ENST00000286428 ARHGAP42A6NI28 874 aa19.42■□□□□ 0.7
VBP1-201ENST00000286428 DFFAO00273 331 aa19.42■□□□□ 0.7
VBP1-201ENST00000286428 MATN3O15232 486 aa19.42■□□□□ 0.7
VBP1-201ENST00000286428 AVILO75366 819 aa19.42■□□□□ 0.7
VBP1-201ENST00000286428 SOAT2O75908 522 aa19.42■□□□□ 0.7
VBP1-201ENST00000286428 NEBLO76041 1014 aa19.42■□□□□ 0.7
VBP1-201ENST00000286428 SUN1O94901 812 aa19.42■□□□□ 0.7
VBP1-201ENST00000286428 AP2A1O95782 977 aa19.42■□□□□ 0.7
VBP1-201ENST00000286428 GCAP28676 217 aa19.42■□□□□ 0.7
VBP1-201ENST00000286428 MS4A13Q5J8X5 152 aa19.42■□□□□ 0.7
VBP1-201ENST00000286428 SYCP2LQ5T4T6 812 aa19.42■□□□□ 0.7
VBP1-201ENST00000286428 LRRC6Q86X45 466 aa19.42■□□□□ 0.7
VBP1-201ENST00000286428 SRRM1Q8IYB3 904 aaKnown RBP19.42■□□□□ 0.7
VBP1-201ENST00000286428 CDKL2Q92772 493 aa19.42■□□□□ 0.7
VBP1-201ENST00000286428 FATE1Q969F0 183 aa19.42■□□□□ 0.7
VBP1-201ENST00000286428 STAMBPL1Q96FJ0 436 aa19.42■□□□□ 0.7
VBP1-201ENST00000286428 ZNF512Q96ME7 567 aaPredicted RBP19.42■□□□□ 0.7
VBP1-201ENST00000286428 YME1L1Q96TA2 773 aa19.42■□□□□ 0.7
VBP1-201ENST00000286428 CLSTN3Q9BQT9 956 aa19.42■□□□□ 0.7
VBP1-201ENST00000286428 WDR83Q9BRX9 315 aaKnown RBP19.42■□□□□ 0.7
VBP1-201ENST00000286428 UXTQ9UBK9 157 aaPredicted RBP19.42■□□□□ 0.7
VBP1-201ENST00000286428 ZNF180Q9UJW8 692 aa19.42■□□□□ 0.7
VBP1-201ENST00000286428 PCDHB12Q9Y5F1 795 aa19.42■□□□□ 0.7
VBP1-201ENST00000286428 TET1Q8NFU7 2136 aa19.42■□□□□ 0.7
VBP1-201ENST00000286428 VWA8A3KMH1 1905 aa19.41■□□□□ 0.7
VBP1-201ENST00000286428 C2CD2LO14523 706 aa19.41■□□□□ 0.7
VBP1-201ENST00000286428 FAM107AO95990 144 aa19.41■□□□□ 0.7
VBP1-201ENST00000286428 IGLV3-27P01718 113 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms