RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 FCRL5Q96RD9 977 aa4.94□□□□□ -1.62
CCDC54-201ENST00000261058 ZNF347Q96SE7 839 aa4.94□□□□□ -1.62
CCDC54-201ENST00000261058 CD207Q9UJ71 328 aa4.94□□□□□ -1.62
CCDC54-201ENST00000261058 SLC13A4Q9UKG4 626 aa4.94□□□□□ -1.62
CCDC54-201ENST00000261058 PKP3Q9Y446 797 aa4.94□□□□□ -1.62
CCDC54-201ENST00000261058 MCIDASD6RGH6 385 aa4.93□□□□□ -1.62
CCDC54-201ENST00000261058 AGR2O95994 175 aa4.93□□□□□ -1.62
CCDC54-201ENST00000261058 RPS6KB1P23443 525 aa4.93□□□□□ -1.62
CCDC54-201ENST00000261058 CNTFP26441 200 aa4.93□□□□□ -1.62
CCDC54-201ENST00000261058 TACR3P29371 465 aa4.93□□□□□ -1.62
CCDC54-201ENST00000261058 HOXA7P31268 230 aaPredicted RBP4.93□□□□□ -1.62
CCDC54-201ENST00000261058 MVDP53602 400 aa4.93□□□□□ -1.62
CCDC54-201ENST00000261058 SETQ01105 290 aaPredicted RBP4.93□□□□□ -1.62
CCDC54-201ENST00000261058 SLC10A2Q12908 348 aaPredicted RBP4.93□□□□□ -1.62
CCDC54-201ENST00000261058 SLC12A1Q13621 1099 aa4.93□□□□□ -1.62
CCDC54-201ENST00000261058 CC2D1BQ5T0F9 858 aaKnown RBP4.93□□□□□ -1.62
CCDC54-201ENST00000261058 UBE2Q1Q7Z7E8 422 aa4.93□□□□□ -1.62
CCDC54-201ENST00000261058 SCN4BQ8IWT1 228 aa4.93□□□□□ -1.62
CCDC54-201ENST00000261058 MAP4K1Q92918 833 aa4.93□□□□□ -1.62
CCDC54-201ENST00000261058 MASTLQ96GX5 879 aa4.93□□□□□ -1.62
CCDC54-201ENST00000261058 EFHD1Q9BUP0 239 aa4.93□□□□□ -1.62
CCDC54-201ENST00000261058 TRIM2Q9C040 744 aa4.93□□□□□ -1.62
CCDC54-201ENST00000261058 ARL8BQ9NVJ2 186 aa4.93□□□□□ -1.62
CCDC54-201ENST00000261058 LMTK3Q96Q04 1460 aa4.93□□□□□ -1.62
CCDC54-201ENST00000261058 MANSC4A6NHS7 340 aaPredicted RBP4.92□□□□□ -1.62
CCDC54-201ENST00000261058 DHX16O60231 1041 aaKnown RBP4.92□□□□□ -1.62
CCDC54-201ENST00000261058 RBMXL2O75526 392 aaKnown RBP4.92□□□□□ -1.62
CCDC54-201ENST00000261058 METTL18O95568 372 aa4.92□□□□□ -1.62
CCDC54-201ENST00000261058 PLAUP00749 431 aa4.92□□□□□ -1.62
CCDC54-201ENST00000261058 TNNT1P13805 278 aa4.92□□□□□ -1.62
CCDC54-201ENST00000261058 ARSAP15289 507 aa4.92□□□□□ -1.62
CCDC54-201ENST00000261058 AVPR2P30518 371 aa4.92□□□□□ -1.62
CCDC54-201ENST00000261058 HMGA2P52926 109 aa4.92□□□□□ -1.62
CCDC54-201ENST00000261058 CFHR1Q03591 330 aa4.92□□□□□ -1.62
CCDC54-201ENST00000261058 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.92□□□□□ -1.62
CCDC54-201ENST00000261058 GPR162Q16538 588 aa4.92□□□□□ -1.62
CCDC54-201ENST00000261058 WDR45BQ5MNZ6 344 aa4.92□□□□□ -1.62
CCDC54-201ENST00000261058 CCDC70Q6NSX1 233 aa4.92□□□□□ -1.62
CCDC54-201ENST00000261058 SYNE3Q6ZMZ3 975 aa4.92□□□□□ -1.62
CCDC54-201ENST00000261058 BCAS4Q8TDM0 211 aa4.92□□□□□ -1.62
CCDC54-201ENST00000261058 PPM1MQ96MI6 270 aa4.92□□□□□ -1.62
CCDC54-201ENST00000261058 HDHD5Q9BXW7 423 aa4.92□□□□□ -1.62
CCDC54-201ENST00000261058 CLPBQ9H078 707 aa4.92□□□□□ -1.62
CCDC54-201ENST00000261058 OSBPL5Q9H0X9 879 aaPredicted RBP4.92□□□□□ -1.62
CCDC54-201ENST00000261058 FLRT1Q9NZU1 646 aa4.92□□□□□ -1.62
CCDC54-201ENST00000261058 DTX4Q9Y2E6 619 aa4.92□□□□□ -1.62
CCDC54-201ENST00000261058 CRYL1Q9Y2S2 319 aa4.92□□□□□ -1.62
CCDC54-201ENST00000261058 AFG3L2Q9Y4W6 797 aa4.92□□□□□ -1.62
CCDC54-201ENST00000261058 C17orf100A8MU93 164 aa4.91□□□□□ -1.62
CCDC54-201ENST00000261058 KCNJ18B7U540 433 aa4.91□□□□□ -1.62
CCDC54-201ENST00000261058 DSCR3O14972 297 aa4.91□□□□□ -1.62
CCDC54-201ENST00000261058 LYL1P12980 280 aa4.91□□□□□ -1.62
CCDC54-201ENST00000261058 AKR1A1P14550 325 aa4.91□□□□□ -1.62
CCDC54-201ENST00000261058 HOXB9P17482 250 aaPredicted RBP4.91□□□□□ -1.62
CCDC54-201ENST00000261058 HSF1Q00613 529 aa4.91□□□□□ -1.62
CCDC54-201ENST00000261058 FOXF2Q12947 444 aa4.91□□□□□ -1.62
CCDC54-201ENST00000261058 ALKBH1Q13686 389 aaKnown RBP4.91□□□□□ -1.62
CCDC54-201ENST00000261058 ANXA2RQ3ZCQ2 193 aa4.91□□□□□ -1.62
CCDC54-201ENST00000261058 TMEM119Q4V9L6 283 aa4.91□□□□□ -1.62
CCDC54-201ENST00000261058 ATG16L1Q676U5 607 aa4.91□□□□□ -1.62
CCDC54-201ENST00000261058 MTFR2Q6P444 385 aa4.91□□□□□ -1.62
CCDC54-201ENST00000261058 GALNT16Q8N428 558 aa4.91□□□□□ -1.62
CCDC54-201ENST00000261058 ESX1Q8N693 406 aa4.91□□□□□ -1.62
CCDC54-201ENST00000261058 NAXEQ8NCW5 288 aa4.91□□□□□ -1.62
CCDC54-201ENST00000261058 LSM14AQ8ND56 463 aaKnown RBP4.91□□□□□ -1.62
CCDC54-201ENST00000261058 WIPF2Q8TF74 440 aaPredicted RBP4.91□□□□□ -1.62
CCDC54-201ENST00000261058 HTRA1Q92743 480 aa4.91□□□□□ -1.62
CCDC54-201ENST00000261058 C5orf34Q96MH7 638 aa4.91□□□□□ -1.62
CCDC54-201ENST00000261058 ABHD14AQ9BUJ0 271 aa4.91□□□□□ -1.62
CCDC54-201ENST00000261058 PHF7Q9BWX1 381 aaPredicted RBP4.91□□□□□ -1.62
CCDC54-201ENST00000261058 SEMA4CQ9C0C4 833 aa4.91□□□□□ -1.62
CCDC54-201ENST00000261058 UBA5Q9GZZ9 404 aa4.91□□□□□ -1.62
CCDC54-201ENST00000261058 IL21RQ9HBE5 538 aa4.91□□□□□ -1.62
CCDC54-201ENST00000261058 THAP1Q9NVV9 213 aa4.91□□□□□ -1.62
CCDC54-201ENST00000261058 GDAQ9Y2T3 454 aa4.91□□□□□ -1.62
CCDC54-201ENST00000261058 TMEM98Q9Y2Y6 226 aa4.91□□□□□ -1.62
CCDC54-201ENST00000261058 FAM90A7PA6NKC0 464 aa4.9□□□□□ -1.62
CCDC54-201ENST00000261058 FAM90A22PA8MWA6 464 aa4.9□□□□□ -1.62
CCDC54-201ENST00000261058 FAM90A12PA8MX19 464 aa4.9□□□□□ -1.62
CCDC54-201ENST00000261058 FAM90A23PA8MXZ1 464 aa4.9□□□□□ -1.62
CCDC54-201ENST00000261058 INPPL1O15357 1258 aa4.9□□□□□ -1.62
CCDC54-201ENST00000261058 TUBB4AP04350 444 aa4.9□□□□□ -1.62
CCDC54-201ENST00000261058 INHBEP58166 350 aa4.9□□□□□ -1.62
CCDC54-201ENST00000261058 YPEL5P62699 121 aa4.9□□□□□ -1.62
CCDC54-201ENST00000261058 RHAGQ02094 409 aa4.9□□□□□ -1.62
CCDC54-201ENST00000261058 TRPC3Q13507 836 aa4.9□□□□□ -1.62
CCDC54-201ENST00000261058 DLGAP5Q15398 846 aa4.9□□□□□ -1.62
CCDC54-201ENST00000261058 GXYLT1Q4G148 440 aa4.9□□□□□ -1.62
CCDC54-201ENST00000261058 KIAA1755Q5JYT7 1200 aa4.9□□□□□ -1.62
CCDC54-201ENST00000261058 VWA5B1Q5TIE3 1220 aa4.9□□□□□ -1.62
CCDC54-201ENST00000261058 LIPMQ5VYY2 423 aa4.9□□□□□ -1.62
CCDC54-201ENST00000261058 JAKMIP3Q5VZ66 844 aa4.9□□□□□ -1.62
CCDC54-201ENST00000261058 PAPD7Q5XG87 772 aaKnown RBP4.9□□□□□ -1.62
CCDC54-201ENST00000261058 DHRS13Q6UX07 377 aa4.9□□□□□ -1.62
CCDC54-201ENST00000261058 GALNT7Q86SF2 657 aa4.9□□□□□ -1.62
CCDC54-201ENST00000261058 TMEM200AQ86VY9 491 aa4.9□□□□□ -1.62
CCDC54-201ENST00000261058 UEVLDQ8IX04 471 aa4.9□□□□□ -1.62
CCDC54-201ENST00000261058 OSR1Q8TAX0 266 aaPredicted RBP4.9□□□□□ -1.62
CCDC54-201ENST00000261058 FAM110DQ8TAY7 271 aaPredicted RBP4.9□□□□□ -1.62
CCDC54-201ENST00000261058 NTN5Q8WTR8 489 aaPredicted RBP4.9□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms