RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 IL31Q6EBC2 164 aa10.88□□□□□ -0.67
CCDC9-203ENST00000596938 TCEAL6Q6IPX3 200 aa10.88□□□□□ -0.67
CCDC9-203ENST00000596938 SLC23A3Q6PIS1 610 aa10.88□□□□□ -0.67
CCDC9-203ENST00000596938 KIAA1324Q6UXG2 1013 aaKnown RBP10.88□□□□□ -0.67
CCDC9-203ENST00000596938 ARCQ7LC44 396 aa10.88□□□□□ -0.67
CCDC9-203ENST00000596938 RABEPKQ7Z6M1 372 aa10.88□□□□□ -0.67
CCDC9-203ENST00000596938 CARNMT1Q8N4J0 409 aa10.88□□□□□ -0.67
CCDC9-203ENST00000596938 CADM4Q8NFZ8 388 aa10.88□□□□□ -0.67
CCDC9-203ENST00000596938 CYB5D2Q8WUJ1 264 aa10.88□□□□□ -0.67
CCDC9-203ENST00000596938 FOXJ1Q92949 421 aa10.88□□□□□ -0.67
CCDC9-203ENST00000596938 TCEAL3Q969E4 200 aa10.88□□□□□ -0.67
CCDC9-203ENST00000596938 ERLEC1Q96DZ1 483 aa10.88□□□□□ -0.67
CCDC9-203ENST00000596938 PGAP3Q96FM1 320 aaPredicted RBP10.88□□□□□ -0.67
CCDC9-203ENST00000596938 NPY6RQ99463 290 aa10.88□□□□□ -0.67
CCDC9-203ENST00000596938 NUP58Q9BVL2 599 aa10.88□□□□□ -0.67
CCDC9-203ENST00000596938 PRSS16Q9NQE7 514 aa10.88□□□□□ -0.67
CCDC9-203ENST00000596938 FAM207AQ9NSI2 230 aaPredicted RBP10.88□□□□□ -0.67
CCDC9-203ENST00000596938 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.88□□□□□ -0.67
CCDC9-203ENST00000596938 INTS6Q9UL03 887 aaKnown RBP10.88□□□□□ -0.67
CCDC9-203ENST00000596938 KIAA1549LQ6ZVL6 1849 aa10.88□□□□□ -0.67
CCDC9-203ENST00000596938 MED19A0JLT2 244 aaPredicted RBP10.87□□□□□ -0.67
CCDC9-203ENST00000596938 PATE3B3GLJ2 98 aa10.87□□□□□ -0.67
CCDC9-203ENST00000596938 H0Y626 953 aa10.87□□□□□ -0.67
CCDC9-203ENST00000596938 CDX4O14627 284 aaPredicted RBP10.87□□□□□ -0.67
CCDC9-203ENST00000596938 GFPT2O94808 682 aa10.87□□□□□ -0.67
CCDC9-203ENST00000596938 MOCS3O95396 460 aa10.87□□□□□ -0.67
CCDC9-203ENST00000596938 SRPRAP08240 638 aaKnown RBP10.87□□□□□ -0.67
CCDC9-203ENST00000596938 MMEP08473 750 aa10.87□□□□□ -0.67
CCDC9-203ENST00000596938 ACADMP11310 421 aa10.87□□□□□ -0.67
CCDC9-203ENST00000596938 HLA-EP13747 358 aa10.87□□□□□ -0.67
CCDC9-203ENST00000596938 SOX5P35711 763 aa10.87□□□□□ -0.67
CCDC9-203ENST00000596938 CSKP41240 450 aa10.87□□□□□ -0.67
CCDC9-203ENST00000596938 STAT1P42224 750 aa10.87□□□□□ -0.67
CCDC9-203ENST00000596938 CXCR3P49682 368 aa10.87□□□□□ -0.67
CCDC9-203ENST00000596938 KLK7P49862 253 aa10.87□□□□□ -0.67
CCDC9-203ENST00000596938 PLK1P53350 603 aa10.87□□□□□ -0.67
CCDC9-203ENST00000596938 ST8SIA6P61647 398 aa10.87□□□□□ -0.67
CCDC9-203ENST00000596938 CDR2Q01850 454 aa10.87□□□□□ -0.67
CCDC9-203ENST00000596938 TYRO3Q06418 890 aa10.87□□□□□ -0.67
CCDC9-203ENST00000596938 NME3Q13232 169 aa10.87□□□□□ -0.67
CCDC9-203ENST00000596938 AUHQ13825 339 aaKnown RBP10.87□□□□□ -0.67
CCDC9-203ENST00000596938 SYCP1Q15431 976 aa10.87□□□□□ -0.67
CCDC9-203ENST00000596938 DUOXA1Q1HG43 343 aa10.87□□□□□ -0.67
CCDC9-203ENST00000596938 SLC25A52Q3SY17 297 aa10.87□□□□□ -0.67
CCDC9-203ENST00000596938 C5orf22Q49AR2 442 aa10.87□□□□□ -0.67
CCDC9-203ENST00000596938 BRMS1LQ5PSV4 323 aa10.87□□□□□ -0.67
CCDC9-203ENST00000596938 RABGAP1LQ5R372 815 aa10.87□□□□□ -0.67
CCDC9-203ENST00000596938 SYCP2LQ5T4T6 812 aa10.87□□□□□ -0.67
CCDC9-203ENST00000596938 ACBD5Q5T8D3 534 aaPredicted RBP10.87□□□□□ -0.67
CCDC9-203ENST00000596938 TAF3Q5VWG9 929 aa10.87□□□□□ -0.67
CCDC9-203ENST00000596938 ARMCX6Q7L4S7 300 aa10.87□□□□□ -0.67
CCDC9-203ENST00000596938 APTXQ7Z2E3 356 aaKnown RBP10.87□□□□□ -0.67
CCDC9-203ENST00000596938 CHSY1Q86X52 802 aa10.87□□□□□ -0.67
CCDC9-203ENST00000596938 XYLT1Q86Y38 959 aa10.87□□□□□ -0.67
CCDC9-203ENST00000596938 SLC41A1Q8IVJ1 513 aa10.87□□□□□ -0.67
CCDC9-203ENST00000596938 DEFB119Q8N690 84 aa10.87□□□□□ -0.67
CCDC9-203ENST00000596938 MSANTD4Q8NCY6 345 aa10.87□□□□□ -0.67
CCDC9-203ENST00000596938 CPA5Q8WXQ8 436 aa10.87□□□□□ -0.67
CCDC9-203ENST00000596938 DNASE2BQ8WZ79 361 aa10.87□□□□□ -0.67
CCDC9-203ENST00000596938 TOE1Q96GM8 510 aaKnown RBP10.87□□□□□ -0.67
CCDC9-203ENST00000596938 MYO19Q96H55 970 aa10.87□□□□□ -0.67
CCDC9-203ENST00000596938 MRGPRX3Q96LB0 322 aa10.87□□□□□ -0.67
CCDC9-203ENST00000596938 ERGIC2Q96RQ1 377 aa10.87□□□□□ -0.67
CCDC9-203ENST00000596938 PPP1R9BQ96SB3 815 aa10.87□□□□□ -0.67
CCDC9-203ENST00000596938 BPIFA3Q9BQP9 254 aa10.87□□□□□ -0.67
CCDC9-203ENST00000596938 EDEM2Q9BV94 578 aa10.87□□□□□ -0.67
CCDC9-203ENST00000596938 NUSAP1Q9BXS6 441 aaKnown RBP10.87□□□□□ -0.67
CCDC9-203ENST00000596938 NAT10Q9H0A0 1025 aaKnown RBP10.87□□□□□ -0.67
CCDC9-203ENST00000596938 HSD3B7Q9H2F3 369 aa10.87□□□□□ -0.67
CCDC9-203ENST00000596938 WDCPQ9H6R7 721 aa10.87□□□□□ -0.67
CCDC9-203ENST00000596938 ARHGEF38Q9NXL2 777 aa10.87□□□□□ -0.67
CCDC9-203ENST00000596938 TMEM63CQ9P1W3 806 aa10.87□□□□□ -0.67
CCDC9-203ENST00000596938 TMEM59LQ9UK28 342 aa10.87□□□□□ -0.67
CCDC9-203ENST00000596938 NOCTQ9UK39 431 aaKnown RBP10.87□□□□□ -0.67
CCDC9-203ENST00000596938 STAP1Q9ULZ2 295 aa10.87□□□□□ -0.67
CCDC9-203ENST00000596938 SLC6A14Q9UN76 642 aa10.87□□□□□ -0.67
CCDC9-203ENST00000596938 PAXBP1Q9Y5B6 917 aa10.87□□□□□ -0.67
CCDC9-203ENST00000596938 SDK1Q7Z5N4 2213 aa10.86□□□□□ -0.67
CCDC9-203ENST00000596938 SYNJ2BP-COX16A0A087WUM0 186 aa10.86□□□□□ -0.67
CCDC9-203ENST00000596938 A0A1B0GVM2 712 aa10.86□□□□□ -0.67
CCDC9-203ENST00000596938 TCAF2A6NFQ2 919 aa10.86□□□□□ -0.67
CCDC9-203ENST00000596938 C4orf47A7E2U8 309 aa10.86□□□□□ -0.67
CCDC9-203ENST00000596938 EPHB6O15197 1021 aa10.86□□□□□ -0.67
CCDC9-203ENST00000596938 CYP1A1P04798 512 aaPredicted RBP10.86□□□□□ -0.67
CCDC9-203ENST00000596938 SERPINF2P08697 491 aa10.86□□□□□ -0.67
CCDC9-203ENST00000596938 CHRNB2P17787 502 aa10.86□□□□□ -0.67
CCDC9-203ENST00000596938 MMP8P22894 467 aa10.86□□□□□ -0.67
CCDC9-203ENST00000596938 VASPP50552 380 aaPredicted RBP10.86□□□□□ -0.67
CCDC9-203ENST00000596938 RNASE9P60153 205 aaKnown RBP10.86□□□□□ -0.67
CCDC9-203ENST00000596938 NOMO3P69849 1222 aa10.86□□□□□ -0.67
CCDC9-203ENST00000596938 ECT2LQ008S8 904 aa10.86□□□□□ -0.67
CCDC9-203ENST00000596938 UBXN1Q04323 297 aa10.86□□□□□ -0.67
CCDC9-203ENST00000596938 HNRNPA1L2Q32P51 320 aaKnown RBP10.86□□□□□ -0.67
CCDC9-203ENST00000596938 PLEKHG6Q3KR16 790 aa10.86□□□□□ -0.67
CCDC9-203ENST00000596938 TRIM61Q5EBN2 209 aa10.86□□□□□ -0.67
CCDC9-203ENST00000596938 PITRM1Q5JRX3 1037 aa10.86□□□□□ -0.67
CCDC9-203ENST00000596938 WDR45BQ5MNZ6 344 aa10.86□□□□□ -0.67
CCDC9-203ENST00000596938 DAB2IPQ5VWQ8 1189 aa10.86□□□□□ -0.67
CCDC9-203ENST00000596938 FBXL22Q6P050 247 aa10.86□□□□□ -0.67
CCDC9-203ENST00000596938 MMS22LQ6ZRQ5 1243 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms