RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 SLC8A2Q9UPR5 921 aa26.6■■□□□ 1.85
TRIM28-204ENST00000594806 CACNA1HO95180 2353 aa26.6■■□□□ 1.85
TRIM28-204ENST00000594806 H0Y626 953 aa26.59■■□□□ 1.85
TRIM28-204ENST00000594806 I6L893 689 aaPredicted RBP26.59■■□□□ 1.85
TRIM28-204ENST00000594806 CLDN11O75508 207 aa26.59■■□□□ 1.85
TRIM28-204ENST00000594806 RNF8O76064 485 aa26.59■■□□□ 1.85
TRIM28-204ENST00000594806 CHRM1P11229 460 aaPredicted RBP26.59■■□□□ 1.85
TRIM28-204ENST00000594806 PABPC1P11940 636 aaKnown RBP26.59■■□□□ 1.85
TRIM28-204ENST00000594806 HNRNPLP14866 589 aaKnown RBP eCLIP26.59■■□□□ 1.85
TRIM28-204ENST00000594806 TIE1P35590 1138 aa26.59■■□□□ 1.85
TRIM28-204ENST00000594806 SATB1Q01826 763 aa26.59■■□□□ 1.85
TRIM28-204ENST00000594806 OGDHQ02218 1023 aa26.59■■□□□ 1.85
TRIM28-204ENST00000594806 SCAPQ12770 1279 aa26.59■■□□□ 1.85
TRIM28-204ENST00000594806 SLC12A1Q13621 1099 aa26.59■■□□□ 1.85
TRIM28-204ENST00000594806 DMC1Q14565 340 aa26.59■■□□□ 1.85
TRIM28-204ENST00000594806 GEN1Q17RS7 908 aa26.59■■□□□ 1.85
TRIM28-204ENST00000594806 ARHGAP30Q7Z6I6 1101 aaPredicted RBP26.59■■□□□ 1.85
TRIM28-204ENST00000594806 SFTPA1Q8IWL2 248 aa26.59■■□□□ 1.85
TRIM28-204ENST00000594806 CARNMT1Q8N4J0 409 aa26.59■■□□□ 1.85
TRIM28-204ENST00000594806 CAMKK1Q8N5S9 505 aa26.59■■□□□ 1.85
TRIM28-204ENST00000594806 ABCB8Q9NUT2 735 aa26.59■■□□□ 1.85
TRIM28-204ENST00000594806 ELOVL2Q9NXB9 296 aa26.59■■□□□ 1.85
TRIM28-204ENST00000594806 KIAA1522Q9P206 1035 aaPredicted RBP26.59■■□□□ 1.85
TRIM28-204ENST00000594806 GGA2Q9UJY4 613 aa26.59■■□□□ 1.85
TRIM28-204ENST00000594806 DOCK4Q8N1I0 1966 aa26.58■■□□□ 1.85
TRIM28-204ENST00000594806 IGLV3-10A0A075B6K4 115 aa26.58■■□□□ 1.85
TRIM28-204ENST00000594806 DRGXA6NNA5 263 aa26.58■■□□□ 1.85
TRIM28-204ENST00000594806 H2AFZP0C0S5 128 aa26.58■■□□□ 1.85
TRIM28-204ENST00000594806 CDH4P55283 916 aa26.58■■□□□ 1.85
TRIM28-204ENST00000594806 CSTF1Q05048 431 aaKnown RBP26.58■■□□□ 1.85
TRIM28-204ENST00000594806 SDE2Q6IQ49 451 aa26.58■■□□□ 1.85
TRIM28-204ENST00000594806 PKN3Q6P5Z2 889 aa26.58■■□□□ 1.85
TRIM28-204ENST00000594806 H2AFVQ71UI9 128 aa26.58■■□□□ 1.85
TRIM28-204ENST00000594806 SLFN11Q7Z7L1 901 aa26.58■■□□□ 1.85
TRIM28-204ENST00000594806 ZNF683Q8IZ20 524 aa26.58■■□□□ 1.85
TRIM28-204ENST00000594806 CCAR2Q8N163 923 aaKnown RBP26.58■■□□□ 1.85
TRIM28-204ENST00000594806 IL17RCQ8NAC3 791 aa26.58■■□□□ 1.85
TRIM28-204ENST00000594806 CTNNBL1Q8WYA6 563 aaPredicted RBP26.58■■□□□ 1.85
TRIM28-204ENST00000594806 IGSF8Q969P0 613 aa26.58■■□□□ 1.85
TRIM28-204ENST00000594806 PPARGC1AQ9UBK2 798 aaKnown RBP26.58■■□□□ 1.85
TRIM28-204ENST00000594806 LCMT1Q9UIC8 334 aa26.58■■□□□ 1.85
TRIM28-204ENST00000594806 MUC6Q6W4X9 2439 aa26.58■■□□□ 1.85
TRIM28-204ENST00000594806 MOCS3O95396 460 aa26.57■■□□□ 1.84
TRIM28-204ENST00000594806 KLF8O95600 359 aaPredicted RBP26.57■■□□□ 1.84
TRIM28-204ENST00000594806 SP9P0CG40 484 aa26.57■■□□□ 1.84
TRIM28-204ENST00000594806 PIGHQ14442 188 aaPredicted RBP26.57■■□□□ 1.84
TRIM28-204ENST00000594806 EMC10Q5UCC4 262 aa26.57■■□□□ 1.84
TRIM28-204ENST00000594806 C14orf80Q86SX3 495 aa26.57■■□□□ 1.84
TRIM28-204ENST00000594806 CCDC170Q8IYT3 715 aa26.57■■□□□ 1.84
TRIM28-204ENST00000594806 ALLCQ8N6M5 410 aa26.57■■□□□ 1.84
TRIM28-204ENST00000594806 LMLNQ96KR4 655 aa26.57■■□□□ 1.84
TRIM28-204ENST00000594806 UVRAGQ9P2Y5 699 aa26.57■■□□□ 1.84
TRIM28-204ENST00000594806 OR12D3Q9UGF7 316 aa26.57■■□□□ 1.84
TRIM28-204ENST00000594806 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP26.56■■□□□ 1.84
TRIM28-204ENST00000594806 E9PAM4 449 aa26.56■■□□□ 1.84
TRIM28-204ENST00000594806 H0Y858 1186 aa26.56■■□□□ 1.84
TRIM28-204ENST00000594806 ATP5BP06576 529 aaKnown RBP26.56■■□□□ 1.84
TRIM28-204ENST00000594806 TMEM253P0C7T8 217 aa26.56■■□□□ 1.84
TRIM28-204ENST00000594806 NTSR1P30989 418 aa26.56■■□□□ 1.84
TRIM28-204ENST00000594806 ZNF177Q13360 481 aaPredicted RBP26.56■■□□□ 1.84
TRIM28-204ENST00000594806 RAB6CQ53S08 254 aa26.56■■□□□ 1.84
TRIM28-204ENST00000594806 SCYL2Q6P3W7 929 aa26.56■■□□□ 1.84
TRIM28-204ENST00000594806 TXNDC5Q8NBS9 432 aaKnown RBP26.56■■□□□ 1.84
TRIM28-204ENST00000594806 WFDC5Q8TCV5 224 aa26.56■■□□□ 1.84
TRIM28-204ENST00000594806 NELL1Q92832 810 aa26.56■■□□□ 1.84
TRIM28-204ENST00000594806 NUP85Q9BW27 656 aa26.56■■□□□ 1.84
TRIM28-204ENST00000594806 RAB6CQ9H0N0 254 aa26.56■■□□□ 1.84
TRIM28-204ENST00000594806 THAP10Q9P2Z0 257 aaPredicted RBP26.56■■□□□ 1.84
TRIM28-204ENST00000594806 IP6K2Q9UHH9 426 aa26.56■■□□□ 1.84
TRIM28-204ENST00000594806 INTUQ9ULD6 942 aa26.56■■□□□ 1.84
TRIM28-204ENST00000594806 CCDC163A0A0D9SF12 145 aa26.55■■□□□ 1.84
TRIM28-204ENST00000594806 GOLGA6L6A8MZA4 724 aa26.55■■□□□ 1.84
TRIM28-204ENST00000594806 EIF3CLB5ME19 914 aaKnown RBP26.55■■□□□ 1.84
TRIM28-204ENST00000594806 K7ESF4 209 aa26.55■■□□□ 1.84
TRIM28-204ENST00000594806 TDGF1P13385 188 aa26.55■■□□□ 1.84
TRIM28-204ENST00000594806 FECHP22830 423 aa26.55■■□□□ 1.84
TRIM28-204ENST00000594806 DGKEP52429 567 aa26.55■■□□□ 1.84
TRIM28-204ENST00000594806 LMAN2Q12907 356 aa26.55■■□□□ 1.84
TRIM28-204ENST00000594806 EFHC2Q5JST6 749 aa26.55■■□□□ 1.84
TRIM28-204ENST00000594806 EGFLAMQ63HQ2 1017 aa26.55■■□□□ 1.84
TRIM28-204ENST00000594806 ADIPOR2Q86V24 386 aa26.55■■□□□ 1.84
TRIM28-204ENST00000594806 CCDC185Q8N715 623 aa26.55■■□□□ 1.84
TRIM28-204ENST00000594806 EIF3CQ99613 913 aaKnown RBP26.55■■□□□ 1.84
TRIM28-204ENST00000594806 CIPCQ9C0C6 399 aa26.55■■□□□ 1.84
TRIM28-204ENST00000594806 TMPRSS4Q9NRS4 437 aa26.55■■□□□ 1.84
TRIM28-204ENST00000594806 HCN2Q9UL51 889 aa26.55■■□□□ 1.84
TRIM28-204ENST00000594806 TBC1D30Q9Y2I9 924 aa26.55■■□□□ 1.84
TRIM28-204ENST00000594806 MYO1FO00160 1098 aa26.54■■□□□ 1.84
TRIM28-204ENST00000594806 ASLP04424 464 aa26.54■■□□□ 1.84
TRIM28-204ENST00000594806 POLR2EP19388 210 aaKnown RBP26.54■■□□□ 1.84
TRIM28-204ENST00000594806 L1CAMP32004 1257 aa26.54■■□□□ 1.84
TRIM28-204ENST00000594806 CD70P32970 193 aa26.54■■□□□ 1.84
TRIM28-204ENST00000594806 PCK1P35558 622 aa26.54■■□□□ 1.84
TRIM28-204ENST00000594806 PLK1P53350 603 aa26.54■■□□□ 1.84
TRIM28-204ENST00000594806 ZNF252P-AS1Q0IIN9 211 aa26.54■■□□□ 1.84
TRIM28-204ENST00000594806 CRY1Q16526 586 aa26.54■■□□□ 1.84
TRIM28-204ENST00000594806 TMEM215Q68D42 235 aa26.54■■□□□ 1.84
TRIM28-204ENST00000594806 MBLAC2Q68D91 279 aa26.54■■□□□ 1.84
TRIM28-204ENST00000594806 ZC3H14Q6PJT7 736 aaKnown RBP26.54■■□□□ 1.84
TRIM28-204ENST00000594806 SETD3Q86TU7 594 aaPredicted RBP26.54■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 183.6 ms