RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 PPIL6Q8IXY8 311 aa11.74□□□□□ -0.53
SMAD4-205ENST00000588745 ZNF683Q8IZ20 524 aa11.74□□□□□ -0.53
SMAD4-205ENST00000588745 ELMOD1Q8N336 334 aa11.74□□□□□ -0.53
SMAD4-205ENST00000588745 ZCCHC9Q8N567 271 aaKnown RBP11.74□□□□□ -0.53
SMAD4-205ENST00000588745 RTL3Q8N8U3 475 aaKnown RBP11.74□□□□□ -0.53
SMAD4-205ENST00000588745 NETO2Q8NC67 525 aa11.74□□□□□ -0.53
SMAD4-205ENST00000588745 CPT1BQ92523 772 aa11.74□□□□□ -0.53
SMAD4-205ENST00000588745 PRCCQ92733 491 aaPredicted RBP11.74□□□□□ -0.53
SMAD4-205ENST00000588745 HDAC11Q96DB2 347 aa11.74□□□□□ -0.53
SMAD4-205ENST00000588745 LGMNQ99538 433 aa11.74□□□□□ -0.53
SMAD4-205ENST00000588745 PRMT1Q99873 361 aaKnown RBP11.74□□□□□ -0.53
SMAD4-205ENST00000588745 FERMT1Q9BQL6 677 aa11.74□□□□□ -0.53
SMAD4-205ENST00000588745 FOXP3Q9BZS1 431 aa11.74□□□□□ -0.53
SMAD4-205ENST00000588745 KLC2Q9H0B6 622 aa11.74□□□□□ -0.53
SMAD4-205ENST00000588745 BRD8Q9H0E9 1235 aa11.74□□□□□ -0.53
SMAD4-205ENST00000588745 PPARGC1AQ9UBK2 798 aaKnown RBP11.74□□□□□ -0.53
SMAD4-205ENST00000588745 VANGL2Q9ULK5 521 aa11.74□□□□□ -0.53
SMAD4-205ENST00000588745 ATP8A1Q9Y2Q0 1164 aa11.74□□□□□ -0.53
SMAD4-205ENST00000588745 MTCL1Q9Y4B5 1905 aaKnown RBP11.74□□□□□ -0.53
SMAD4-205ENST00000588745 IGLV3-10A0A075B6K4 115 aa11.73□□□□□ -0.53
SMAD4-205ENST00000588745 A0A0A0MRY4 1105 aa11.73□□□□□ -0.53
SMAD4-205ENST00000588745 C5orf60A6NFR6 353 aa11.73□□□□□ -0.53
SMAD4-205ENST00000588745 SMAPO00193 183 aa11.73□□□□□ -0.53
SMAD4-205ENST00000588745 ACSL4O60488 711 aa11.73□□□□□ -0.53
SMAD4-205ENST00000588745 GCATO75600 419 aa11.73□□□□□ -0.53
SMAD4-205ENST00000588745 STK10O94804 968 aaKnown RBP11.73□□□□□ -0.53
SMAD4-205ENST00000588745 OLFM2O95897 454 aa11.73□□□□□ -0.53
SMAD4-205ENST00000588745 GABRR2P28476 465 aa11.73□□□□□ -0.53
SMAD4-205ENST00000588745 GARSP41250 739 aaKnown RBP11.73□□□□□ -0.53
SMAD4-205ENST00000588745 KCNQ1P51787 676 aa11.73□□□□□ -0.53
SMAD4-205ENST00000588745 PMS2P54278 862 aa11.73□□□□□ -0.53
SMAD4-205ENST00000588745 BASP1P80723 227 aaKnown RBP11.73□□□□□ -0.53
SMAD4-205ENST00000588745 COG7P83436 770 aa11.73□□□□□ -0.53
SMAD4-205ENST00000588745 PPIDQ08752 370 aaKnown RBP11.73□□□□□ -0.53
SMAD4-205ENST00000588745 PPM1LQ5SGD2 360 aa11.73□□□□□ -0.53
SMAD4-205ENST00000588745 CFAP58Q5T655 872 aa11.73□□□□□ -0.53
SMAD4-205ENST00000588745 ALS2CLQ60I27 953 aa11.73□□□□□ -0.53
SMAD4-205ENST00000588745 RAP1GAP2Q684P5 730 aa11.73□□□□□ -0.53
SMAD4-205ENST00000588745 FBXL22Q6P050 247 aa11.73□□□□□ -0.53
SMAD4-205ENST00000588745 C4orf22Q6V702 233 aa11.73□□□□□ -0.53
SMAD4-205ENST00000588745 CEP128Q6ZU80 1094 aa11.73□□□□□ -0.53
SMAD4-205ENST00000588745 RTL10Q7L3V2 364 aa11.73□□□□□ -0.53
SMAD4-205ENST00000588745 NLRP14Q86W24 1093 aa11.73□□□□□ -0.53
SMAD4-205ENST00000588745 CCDC25Q86WR0 208 aa11.73□□□□□ -0.53
SMAD4-205ENST00000588745 CHSY1Q86X52 802 aa11.73□□□□□ -0.53
SMAD4-205ENST00000588745 ARHGAP12Q8IWW6 846 aa11.73□□□□□ -0.53
SMAD4-205ENST00000588745 LZTR1Q8N653 840 aa11.73□□□□□ -0.53
SMAD4-205ENST00000588745 NAT8LQ8N9F0 302 aa11.73□□□□□ -0.53
SMAD4-205ENST00000588745 CCNYQ8ND76 341 aa11.73□□□□□ -0.53
SMAD4-205ENST00000588745 CCDC110Q8TBZ0 833 aa11.73□□□□□ -0.53
SMAD4-205ENST00000588745 MICAL1Q8TDZ2 1067 aa11.73□□□□□ -0.53
SMAD4-205ENST00000588745 P2RY11Q96G91 374 aa11.73□□□□□ -0.53
SMAD4-205ENST00000588745 CELF6Q96J87 481 aaKnown RBP11.73□□□□□ -0.53
SMAD4-205ENST00000588745 SPATA13Q96N96 652 aa11.73□□□□□ -0.53
SMAD4-205ENST00000588745 LRRC3Q9BY71 257 aa11.73□□□□□ -0.53
SMAD4-205ENST00000588745 ZYG11BQ9C0D3 744 aa11.73□□□□□ -0.53
SMAD4-205ENST00000588745 FAM53CQ9NYF3 392 aa11.73□□□□□ -0.53
SMAD4-205ENST00000588745 YBX2Q9Y2T7 364 aaKnown RBP11.73□□□□□ -0.53
SMAD4-205ENST00000588745 DENND4CQ5VZ89 1909 aa11.72□□□□□ -0.53
SMAD4-205ENST00000588745 DOCK4Q8N1I0 1966 aa11.72□□□□□ -0.53
SMAD4-205ENST00000588745 GOLGA6BA6NDN3 693 aa11.72□□□□□ -0.53
SMAD4-205ENST00000588745 CCDC85CA6NKD9 419 aa11.72□□□□□ -0.53
SMAD4-205ENST00000588745 H3BNC9 293 aa11.72□□□□□ -0.53
SMAD4-205ENST00000588745 RNF103O00237 685 aa11.72□□□□□ -0.53
SMAD4-205ENST00000588745 CHADO15335 359 aa11.72□□□□□ -0.53
SMAD4-205ENST00000588745 CLASP2O75122 1294 aaKnown RBP11.72□□□□□ -0.53
SMAD4-205ENST00000588745 STC2O76061 302 aa11.72□□□□□ -0.53
SMAD4-205ENST00000588745 TMEM63AO94886 807 aa11.72□□□□□ -0.53
SMAD4-205ENST00000588745 MBL2P11226 248 aaPredicted RBP11.72□□□□□ -0.53
SMAD4-205ENST00000588745 RHOQP17081 205 aa11.72□□□□□ -0.53
SMAD4-205ENST00000588745 TACR2P21452 398 aa11.72□□□□□ -0.53
SMAD4-205ENST00000588745 CDC25CP30307 473 aa11.72□□□□□ -0.53
SMAD4-205ENST00000588745 HARS2P49590 506 aaKnown RBP11.72□□□□□ -0.53
SMAD4-205ENST00000588745 IRAK1P51617 712 aa11.72□□□□□ -0.53
SMAD4-205ENST00000588745 CYP4F8P98187 520 aa11.72□□□□□ -0.53
SMAD4-205ENST00000588745 ZNF33AQ06730 810 aa11.72□□□□□ -0.53
SMAD4-205ENST00000588745 GPS2Q13227 327 aa11.72□□□□□ -0.53
SMAD4-205ENST00000588745 GPM6BQ13491 265 aa11.72□□□□□ -0.53
SMAD4-205ENST00000588745 KCNJ11Q14654 390 aa11.72□□□□□ -0.53
SMAD4-205ENST00000588745 ANKRD22Q5VYY1 191 aa11.72□□□□□ -0.53
SMAD4-205ENST00000588745 AFMIDQ63HM1 303 aa11.72□□□□□ -0.53
SMAD4-205ENST00000588745 NADSYN1Q6IA69 706 aa11.72□□□□□ -0.53
SMAD4-205ENST00000588745 PDE12Q6L8Q7 609 aaKnown RBP11.72□□□□□ -0.53
SMAD4-205ENST00000588745 ARHGEF18Q6ZSZ5 1173 aa11.72□□□□□ -0.53
SMAD4-205ENST00000588745 CCDC13Q8IYE1 715 aa11.72□□□□□ -0.53
SMAD4-205ENST00000588745 HS6ST3Q8IZP7 471 aa11.72□□□□□ -0.53
SMAD4-205ENST00000588745 TAB3Q8N5C8 712 aaPredicted RBP11.72□□□□□ -0.53
SMAD4-205ENST00000588745 UBLCP1Q8WVY7 318 aaPredicted RBP11.72□□□□□ -0.53
SMAD4-205ENST00000588745 MRPS31Q92665 395 aaKnown RBP11.72□□□□□ -0.53
SMAD4-205ENST00000588745 AZIN2Q96A70 460 aa11.72□□□□□ -0.53
SMAD4-205ENST00000588745 GCNAQ96QF7 691 aa11.72□□□□□ -0.53
SMAD4-205ENST00000588745 KLF16Q9BXK1 252 aaPredicted RBP11.72□□□□□ -0.53
SMAD4-205ENST00000588745 PHACTR1Q9C0D0 580 aa11.72□□□□□ -0.53
SMAD4-205ENST00000588745 RNF38Q9H0F5 515 aa11.72□□□□□ -0.53
SMAD4-205ENST00000588745 CDC42EP4Q9H3Q1 356 aaKnown RBP11.72□□□□□ -0.53
SMAD4-205ENST00000588745 TRPC7Q9HCX4 862 aa11.72□□□□□ -0.53
SMAD4-205ENST00000588745 MAN1C1Q9NR34 630 aa11.72□□□□□ -0.53
SMAD4-205ENST00000588745 ASAH2Q9NR71 780 aa11.72□□□□□ -0.53
SMAD4-205ENST00000588745 RAB6BQ9NRW1 208 aa11.72□□□□□ -0.53
SMAD4-205ENST00000588745 TMEM248Q9NWD8 314 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms