RNA–Protein interactions for RNA: ENST00000587788.1

SDF2-206, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-206ENST00000587788 HUS1O60921 280 aa5.95□□□□□ -1.46
SDF2-206ENST00000587788 SIN3BO75182 1162 aa5.95□□□□□ -1.46
SDF2-206ENST00000587788 RECQL4O94761 1208 aa5.95□□□□□ -1.46
SDF2-206ENST00000587788 SUN1O94901 812 aa5.95□□□□□ -1.46
SDF2-206ENST00000587788 GJB5O95377 273 aa5.95□□□□□ -1.46
SDF2-206ENST00000587788 VIMP08670 466 aaKnown RBP5.95□□□□□ -1.46
SDF2-206ENST00000587788 GSTA2P09210 222 aa5.95□□□□□ -1.46
SDF2-206ENST00000587788 PDGFRAP16234 1089 aa5.95□□□□□ -1.46
SDF2-206ENST00000587788 PECAM1P16284 738 aaPredicted RBP5.95□□□□□ -1.46
SDF2-206ENST00000587788 TGM2P21980 687 aa5.95□□□□□ -1.46
SDF2-206ENST00000587788 MIPP30301 263 aa5.95□□□□□ -1.46
SDF2-206ENST00000587788 GBP2P32456 591 aaPredicted RBP5.95□□□□□ -1.46
SDF2-206ENST00000587788 GNL1P36915 607 aaPredicted RBP5.95□□□□□ -1.46
SDF2-206ENST00000587788 SLCO1A2P46721 670 aa5.95□□□□□ -1.46
SDF2-206ENST00000587788 LHX1P48742 406 aa5.95□□□□□ -1.46
SDF2-206ENST00000587788 VPS41P49754 854 aa5.95□□□□□ -1.46
SDF2-206ENST00000587788 TAF6P49848 677 aa5.95□□□□□ -1.46
SDF2-206ENST00000587788 GATMP50440 423 aa5.95□□□□□ -1.46
SDF2-206ENST00000587788 NDST1P52848 882 aa5.95□□□□□ -1.46
SDF2-206ENST00000587788 CDH8P55286 799 aa5.95□□□□□ -1.46
SDF2-206ENST00000587788 EIF3EP60228 445 aaKnown RBP5.95□□□□□ -1.46
SDF2-206ENST00000587788 OTUD4Q01804 1114 aaKnown RBP5.95□□□□□ -1.46
SDF2-206ENST00000587788 PLAURQ03405 335 aa5.95□□□□□ -1.46
SDF2-206ENST00000587788 ACTN3Q08043 901 aaPredicted RBP5.95□□□□□ -1.46
SDF2-206ENST00000587788 TRIP13Q15645 432 aaPredicted RBP5.95□□□□□ -1.46
SDF2-206ENST00000587788 LONRF1Q17RB8 773 aa5.95□□□□□ -1.46
SDF2-206ENST00000587788 ATP13A4Q4VNC1 1196 aa5.95□□□□□ -1.46
SDF2-206ENST00000587788 FAM102AQ5T9C2 384 aaPredicted RBP5.95□□□□□ -1.46
SDF2-206ENST00000587788 C9orf57Q5W0N0 161 aa5.95□□□□□ -1.46
SDF2-206ENST00000587788 GLB1LQ6UWU2 654 aa5.95□□□□□ -1.46
SDF2-206ENST00000587788 BZW1Q7L1Q6 419 aaKnown RBP5.95□□□□□ -1.46
SDF2-206ENST00000587788 TMEM110Q86TL2 294 aa5.95□□□□□ -1.46
SDF2-206ENST00000587788 ECHDC2Q86YB7 292 aa5.95□□□□□ -1.46
SDF2-206ENST00000587788 RFX6Q8HWS3 928 aa5.95□□□□□ -1.46
SDF2-206ENST00000587788 PSTKQ8IV42 348 aaKnown RBP5.95□□□□□ -1.46
SDF2-206ENST00000587788 CCDC13Q8IYE1 715 aa5.95□□□□□ -1.46
SDF2-206ENST00000587788 PDIK1LQ8N165 341 aa5.95□□□□□ -1.46
SDF2-206ENST00000587788 CRYBG2Q8N1P7 616 aa5.95□□□□□ -1.46
SDF2-206ENST00000587788 TMEM86AQ8N2M4 240 aa5.95□□□□□ -1.46
SDF2-206ENST00000587788 MICALL1Q8N3F8 863 aa5.95□□□□□ -1.46
SDF2-206ENST00000587788 ATP11CQ8NB49 1132 aa5.95□□□□□ -1.46
SDF2-206ENST00000587788 APPL2Q8NEU8 664 aa5.95□□□□□ -1.46
SDF2-206ENST00000587788 JOSD2Q8TAC2 188 aa5.95□□□□□ -1.46
SDF2-206ENST00000587788 MDM1Q8TC05 714 aa5.95□□□□□ -1.46
SDF2-206ENST00000587788 ACTL9Q8TC94 416 aa5.95□□□□□ -1.46
SDF2-206ENST00000587788 URGCPQ8TCY9 931 aa5.95□□□□□ -1.46
SDF2-206ENST00000587788 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.95□□□□□ -1.46
SDF2-206ENST00000587788 CKAP2Q8WWK9 683 aa5.95□□□□□ -1.46
SDF2-206ENST00000587788 MYLIPQ8WY64 445 aa5.95□□□□□ -1.46
SDF2-206ENST00000587788 MAML1Q92585 1016 aa5.95□□□□□ -1.46
SDF2-206ENST00000587788 MAGEB18Q96M61 343 aa5.95□□□□□ -1.46
SDF2-206ENST00000587788 ZNF560Q96MR9 790 aa5.95□□□□□ -1.46
SDF2-206ENST00000587788 ZMAT2Q96NC0 199 aaKnown RBP5.95□□□□□ -1.46
SDF2-206ENST00000587788 CDX2Q99626 313 aaPredicted RBP5.95□□□□□ -1.46
SDF2-206ENST00000587788 SDCBP2Q9H190 292 aa5.95□□□□□ -1.46
SDF2-206ENST00000587788 ZNF576Q9H609 170 aa5.95□□□□□ -1.46
SDF2-206ENST00000587788 ZWILCHQ9H900 591 aa5.95□□□□□ -1.46
SDF2-206ENST00000587788 CERS4Q9HA82 394 aa5.95□□□□□ -1.46
SDF2-206ENST00000587788 SAYSD1Q9NPB0 183 aa5.95□□□□□ -1.46
SDF2-206ENST00000587788 KCNK9Q9NPC2 374 aa5.95□□□□□ -1.46
SDF2-206ENST00000587788 TMEM161AQ9NX61 479 aa5.95□□□□□ -1.46
SDF2-206ENST00000587788 CYTH4Q9UIA0 394 aa5.95□□□□□ -1.46
SDF2-206ENST00000587788 HES2Q9Y543 173 aa5.95□□□□□ -1.46
SDF2-206ENST00000587788 LINC01553A4QN01 128 aa5.94□□□□□ -1.46
SDF2-206ENST00000587788 RASA4BC9J798 803 aa5.94□□□□□ -1.46
SDF2-206ENST00000587788 E7ESA3 106 aa5.94□□□□□ -1.46
SDF2-206ENST00000587788 CHADO15335 359 aa5.94□□□□□ -1.46
SDF2-206ENST00000587788 RASA4O43374 803 aa5.94□□□□□ -1.46
SDF2-206ENST00000587788 GJB6O95452 261 aa5.94□□□□□ -1.46
SDF2-206ENST00000587788 IFNB1P01574 187 aa5.94□□□□□ -1.46
SDF2-206ENST00000587788 AMHP03971 560 aa5.94□□□□□ -1.46
SDF2-206ENST00000587788 IBSPP21815 317 aaPredicted RBP5.94□□□□□ -1.46
SDF2-206ENST00000587788 SDC4P31431 198 aa5.94□□□□□ -1.46
SDF2-206ENST00000587788 STX2P32856 288 aa5.94□□□□□ -1.46
SDF2-206ENST00000587788 RPL22P35268 128 aaKnown RBP5.94□□□□□ -1.46
SDF2-206ENST00000587788 PTPN9P43378 593 aa5.94□□□□□ -1.46
SDF2-206ENST00000587788 RAP1GAPP47736 663 aa5.94□□□□□ -1.46
SDF2-206ENST00000587788 NR2C2P49116 596 aa5.94□□□□□ -1.46
SDF2-206ENST00000587788 RPL34P49207 117 aaKnown RBP5.94□□□□□ -1.46
SDF2-206ENST00000587788 LIG3P49916 1009 aa5.94□□□□□ -1.46
SDF2-206ENST00000587788 BCAT1P54687 386 aa5.94□□□□□ -1.46
SDF2-206ENST00000587788 SLC8A3P57103 927 aa5.94□□□□□ -1.46
SDF2-206ENST00000587788 GEMIN4P57678 1058 aaKnown RBP5.94□□□□□ -1.46
SDF2-206ENST00000587788 LILRA4P59901 499 aa5.94□□□□□ -1.46
SDF2-206ENST00000587788 HTRA4P83105 476 aaPredicted RBP5.94□□□□□ -1.46
SDF2-206ENST00000587788 SLC6A3Q01959 620 aa5.94□□□□□ -1.46
SDF2-206ENST00000587788 ROR1Q01973 937 aa5.94□□□□□ -1.46
SDF2-206ENST00000587788 RNASELQ05823 741 aaKnown RBP5.94□□□□□ -1.46
SDF2-206ENST00000587788 BST2Q10589 180 aaKnown RBP5.94□□□□□ -1.46
SDF2-206ENST00000587788 HYAL2Q12891 473 aa5.94□□□□□ -1.46
SDF2-206ENST00000587788 PDIA2Q13087 525 aaKnown RBP5.94□□□□□ -1.46
SDF2-206ENST00000587788 XRCC4Q13426 336 aa5.94□□□□□ -1.46
SDF2-206ENST00000587788 ADGRE1Q14246 886 aa5.94□□□□□ -1.46
SDF2-206ENST00000587788 KRT81Q14533 505 aa5.94□□□□□ -1.46
SDF2-206ENST00000587788 NOMO1Q15155 1222 aa5.94□□□□□ -1.46
SDF2-206ENST00000587788 LLGL1Q15334 1064 aa5.94□□□□□ -1.46
SDF2-206ENST00000587788 RAB30Q15771 203 aa5.94□□□□□ -1.46
SDF2-206ENST00000587788 GOLGA7BQ2TAP0 167 aa5.94□□□□□ -1.46
SDF2-206ENST00000587788 CCDC38Q502W7 563 aa5.94□□□□□ -1.46
SDF2-206ENST00000587788 LGSNQ5TDP6 509 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms