RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 DMXL2Q8TDJ6 3036 aa6.06□□□□□ -1.44
SF3B3-214ENST00000572365 TTC3P53804 2025 aa6.05□□□□□ -1.44
SF3B3-214ENST00000572365 DOCK6Q96HP0 2047 aa6.05□□□□□ -1.44
SF3B3-214ENST00000572365 POM121BA6NF01 834 aa6.05□□□□□ -1.44
SF3B3-214ENST00000572365 DRGXA6NNA5 263 aa6.05□□□□□ -1.44
SF3B3-214ENST00000572365 ZNF785A8K8V0 405 aa6.05□□□□□ -1.44
SF3B3-214ENST00000572365 CYSRT1A8MQ03 144 aa6.05□□□□□ -1.44
SF3B3-214ENST00000572365 RSPH10B2B2RC85 870 aa6.05□□□□□ -1.44
SF3B3-214ENST00000572365 CCER2I3L3R5 266 aa6.05□□□□□ -1.44
SF3B3-214ENST00000572365 TBC1D4O60343 1298 aa6.05□□□□□ -1.44
SF3B3-214ENST00000572365 PRDM1O75626 825 aa6.05□□□□□ -1.44
SF3B3-214ENST00000572365 AGFG2O95081 481 aa6.05□□□□□ -1.44
SF3B3-214ENST00000572365 CHEK2O96017 543 aa6.05□□□□□ -1.44
SF3B3-214ENST00000572365 LINC00271P0C7V0 271 aa6.05□□□□□ -1.44
SF3B3-214ENST00000572365 RSPH10BP0C881 870 aa6.05□□□□□ -1.44
SF3B3-214ENST00000572365 MCCP23508 829 aa6.05□□□□□ -1.44
SF3B3-214ENST00000572365 TECP42680 631 aa6.05□□□□□ -1.44
SF3B3-214ENST00000572365 PSMC1P62191 440 aaKnown RBP6.05□□□□□ -1.44
SF3B3-214ENST00000572365 COASYQ13057 564 aa6.05□□□□□ -1.44
SF3B3-214ENST00000572365 SLC13A2Q13183 592 aa6.05□□□□□ -1.44
SF3B3-214ENST00000572365 KRT72Q14CN4 511 aa6.05□□□□□ -1.44
SF3B3-214ENST00000572365 KRTAP19-4Q3LI73 84 aa6.05□□□□□ -1.44
SF3B3-214ENST00000572365 C3orf38Q5JPI3 329 aa6.05□□□□□ -1.44
SF3B3-214ENST00000572365 FAM209BQ5JX69 171 aa6.05□□□□□ -1.44
SF3B3-214ENST00000572365 C12orf60Q5U649 245 aa6.05□□□□□ -1.44
SF3B3-214ENST00000572365 C1QL3Q5VWW1 255 aa6.05□□□□□ -1.44
SF3B3-214ENST00000572365 IZUMO3Q5VZ72 239 aa6.05□□□□□ -1.44
SF3B3-214ENST00000572365 NAIF1Q69YI7 327 aaPredicted RBP6.05□□□□□ -1.44
SF3B3-214ENST00000572365 HTR3DQ70Z44 454 aa6.05□□□□□ -1.44
SF3B3-214ENST00000572365 CIR1Q86X95 450 aaPredicted RBP6.05□□□□□ -1.44
SF3B3-214ENST00000572365 MICU3Q86XE3 530 aa6.05□□□□□ -1.44
SF3B3-214ENST00000572365 SYT12Q8IV01 421 aa6.05□□□□□ -1.44
SF3B3-214ENST00000572365 C12orf76Q8N812 135 aaPredicted RBP6.05□□□□□ -1.44
SF3B3-214ENST00000572365 TMIEQ8NEW7 156 aa6.05□□□□□ -1.44
SF3B3-214ENST00000572365 CAGE1Q8TC20 777 aa6.05□□□□□ -1.44
SF3B3-214ENST00000572365 SPPL3Q8TCT6 385 aa6.05□□□□□ -1.44
SF3B3-214ENST00000572365 POF1BQ8WVV4 589 aa6.05□□□□□ -1.44
SF3B3-214ENST00000572365 KLHL32Q96NJ5 620 aa6.05□□□□□ -1.44
SF3B3-214ENST00000572365 SELENOOQ9BVL4 669 aa6.05□□□□□ -1.44
SF3B3-214ENST00000572365 ZNF518BQ9C0D4 1074 aa6.05□□□□□ -1.44
SF3B3-214ENST00000572365 TINAGL1Q9GZM7 467 aaPredicted RBP6.05□□□□□ -1.44
SF3B3-214ENST00000572365 SACM1LQ9NTJ5 587 aa6.05□□□□□ -1.44
SF3B3-214ENST00000572365 SWAP70Q9UH65 585 aa6.05□□□□□ -1.44
SF3B3-214ENST00000572365 FBXO40Q9UH90 709 aa6.05□□□□□ -1.44
SF3B3-214ENST00000572365 KIAA1217Q5T5P2 1943 aa6.05□□□□□ -1.44
SF3B3-214ENST00000572365 PTPRCP08575 1304 aa6.04□□□□□ -1.44
SF3B3-214ENST00000572365 A0A087WWL8 130 aa6.04□□□□□ -1.44
SF3B3-214ENST00000572365 PATE3B3GLJ2 98 aa6.04□□□□□ -1.44
SF3B3-214ENST00000572365 ATP2A1O14983 1001 aa6.04□□□□□ -1.44
SF3B3-214ENST00000572365 FGF18O76093 207 aa6.04□□□□□ -1.44
SF3B3-214ENST00000572365 MBD4O95243 580 aa6.04□□□□□ -1.44
SF3B3-214ENST00000572365 DCNP07585 359 aaKnown RBP6.04□□□□□ -1.44
SF3B3-214ENST00000572365 GCSHP23434 173 aa6.04□□□□□ -1.44
SF3B3-214ENST00000572365 SLC16A2P36021 539 aa6.04□□□□□ -1.44
SF3B3-214ENST00000572365 ZNF135P52742 658 aaPredicted RBP6.04□□□□□ -1.44
SF3B3-214ENST00000572365 CHN2P52757 468 aa6.04□□□□□ -1.44
SF3B3-214ENST00000572365 RPS16P62249 146 aaKnown RBP6.04□□□□□ -1.44
SF3B3-214ENST00000572365 POU6F2P78424 691 aaPredicted RBP6.04□□□□□ -1.44
SF3B3-214ENST00000572365 BTG3Q14201 252 aaPredicted RBP6.04□□□□□ -1.44
SF3B3-214ENST00000572365 PPP2R5BQ15173 497 aa6.04□□□□□ -1.44
SF3B3-214ENST00000572365 CRB2Q5IJ48 1285 aa6.04□□□□□ -1.44
SF3B3-214ENST00000572365 UBXN11Q5T124 520 aa6.04□□□□□ -1.44
SF3B3-214ENST00000572365 C1orf228Q6PIY5 440 aa6.04□□□□□ -1.44
SF3B3-214ENST00000572365 MED25Q71SY5 747 aa6.04□□□□□ -1.44
SF3B3-214ENST00000572365 USP37Q86T82 979 aa6.04□□□□□ -1.44
SF3B3-214ENST00000572365 DNERQ8NFT8 737 aa6.04□□□□□ -1.44
SF3B3-214ENST00000572365 TBC1D15Q8TC07 691 aa6.04□□□□□ -1.44
SF3B3-214ENST00000572365 CCDC17Q96LX7 622 aa6.04□□□□□ -1.44
SF3B3-214ENST00000572365 SIK2Q9H0K1 926 aa6.04□□□□□ -1.44
SF3B3-214ENST00000572365 S1PR5Q9H228 398 aa6.04□□□□□ -1.44
SF3B3-214ENST00000572365 PARD6AQ9NPB6 346 aa6.04□□□□□ -1.44
SF3B3-214ENST00000572365 FEM1BQ9UK73 627 aa6.04□□□□□ -1.44
SF3B3-214ENST00000572365 PLEKHM1Q9Y4G2 1056 aa6.04□□□□□ -1.44
SF3B3-214ENST00000572365 AKAP13Q12802 2813 aa6.04□□□□□ -1.44
SF3B3-214ENST00000572365 A0A1W2PPC4 97 aa6.03□□□□□ -1.44
SF3B3-214ENST00000572365 E9PLN8 166 aa6.03□□□□□ -1.44
SF3B3-214ENST00000572365 NARSO43776 548 aaKnown RBP6.03□□□□□ -1.44
SF3B3-214ENST00000572365 PRICKLE3O43900 615 aaPredicted RBP6.03□□□□□ -1.44
SF3B3-214ENST00000572365 SURF6O75683 361 aaKnown RBP6.03□□□□□ -1.44
SF3B3-214ENST00000572365 PRSS23O95084 383 aa6.03□□□□□ -1.44
SF3B3-214ENST00000572365 UNC5CO95185 931 aa6.03□□□□□ -1.44
SF3B3-214ENST00000572365 MMP3P08254 477 aa6.03□□□□□ -1.44
SF3B3-214ENST00000572365 PARP1P09874 1014 aaKnown RBP6.03□□□□□ -1.44
SF3B3-214ENST00000572365 PIM1P11309 404 aaPredicted RBP6.03□□□□□ -1.44
SF3B3-214ENST00000572365 HK1P19367 917 aa6.03□□□□□ -1.44
SF3B3-214ENST00000572365 SLC11A2P49281 568 aa6.03□□□□□ -1.44
SF3B3-214ENST00000572365 CLCN5P51795 746 aa6.03□□□□□ -1.44
SF3B3-214ENST00000572365 MXRA7P84157 204 aa6.03□□□□□ -1.44
SF3B3-214ENST00000572365 HHEXQ03014 270 aa6.03□□□□□ -1.44
SF3B3-214ENST00000572365 SLFN5Q08AF3 891 aa6.03□□□□□ -1.44
SF3B3-214ENST00000572365 STK3Q13188 491 aa6.03□□□□□ -1.44
SF3B3-214ENST00000572365 CTBP1Q13363 440 aa6.03□□□□□ -1.44
SF3B3-214ENST00000572365 RAB32Q13637 225 aa6.03□□□□□ -1.44
SF3B3-214ENST00000572365 SLC44A4Q53GD3 710 aa6.03□□□□□ -1.44
SF3B3-214ENST00000572365 METRNLQ641Q3 311 aa6.03□□□□□ -1.44
SF3B3-214ENST00000572365 LMBRD2Q68DH5 695 aaPredicted RBP6.03□□□□□ -1.44
SF3B3-214ENST00000572365 CTR9Q6PD62 1173 aa6.03□□□□□ -1.44
SF3B3-214ENST00000572365 SYCE2Q6PIF2 218 aa6.03□□□□□ -1.44
SF3B3-214ENST00000572365 GLB1LQ6UWU2 654 aa6.03□□□□□ -1.44
SF3B3-214ENST00000572365 SLC30A10Q6XR72 485 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms