RNA–Protein interactions for RNA: ENST00000524165.5

PVT1-220, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 458 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-220ENST00000524165 JAKMIP2Q96AA8 810 aa18.21■□□□□ 0.51
PVT1-220ENST00000524165 PLD4Q96BZ4 506 aa18.21■□□□□ 0.51
PVT1-220ENST00000524165 MYO19Q96H55 970 aa18.21■□□□□ 0.51
PVT1-220ENST00000524165 SDCBP2Q9H190 292 aa18.21■□□□□ 0.51
PVT1-220ENST00000524165 OSBPL2Q9H1P3 480 aa18.21■□□□□ 0.51
PVT1-220ENST00000524165 KCNK4Q9NYG8 393 aa18.21■□□□□ 0.51
PVT1-220ENST00000524165 STRIP2Q9ULQ0 834 aa18.21■□□□□ 0.51
PVT1-220ENST00000524165 DMTF1Q9Y222 760 aa18.21■□□□□ 0.51
PVT1-220ENST00000524165 KIF3AQ9Y496 699 aa18.21■□□□□ 0.51
PVT1-220ENST00000524165 PAXBP1Q9Y5B6 917 aa18.21■□□□□ 0.51
PVT1-220ENST00000524165 FRMD3A2A2Y4 597 aa18.2■□□□□ 0.5
PVT1-220ENST00000524165 PPFIA2O75334 1257 aa18.2■□□□□ 0.5
PVT1-220ENST00000524165 FAM87AP0C7U9 286 aa18.2■□□□□ 0.5
PVT1-220ENST00000524165 GIMD1P0DJR0 217 aa18.2■□□□□ 0.5
PVT1-220ENST00000524165 ALPPL2P10696 532 aa18.2■□□□□ 0.5
PVT1-220ENST00000524165 ST8SIA6P61647 398 aa18.2■□□□□ 0.5
PVT1-220ENST00000524165 ZNF699Q32M78 642 aa18.2■□□□□ 0.5
PVT1-220ENST00000524165 ZNF667Q5HYK9 610 aa18.2■□□□□ 0.5
PVT1-220ENST00000524165 MMAAQ8IVH4 418 aaKnown RBP18.2■□□□□ 0.5
PVT1-220ENST00000524165 C12orf29Q8N999 325 aa18.2■□□□□ 0.5
PVT1-220ENST00000524165 OR14C36Q8NHC7 312 aa18.2■□□□□ 0.5
PVT1-220ENST00000524165 MAPK15Q8TD08 544 aa18.2■□□□□ 0.5
PVT1-220ENST00000524165 ZNF516Q92618 1163 aa18.2■□□□□ 0.5
PVT1-220ENST00000524165 ATXN7L3BQ96GX2 97 aa18.2■□□□□ 0.5
PVT1-220ENST00000524165 APOLD1Q96LR9 279 aa18.2■□□□□ 0.5
PVT1-220ENST00000524165 FAM49BQ9NUQ9 324 aa18.2■□□□□ 0.5
PVT1-220ENST00000524165 UCKL1Q9NWZ5 548 aa18.2■□□□□ 0.5
PVT1-220ENST00000524165 MARCH2Q9P0N8 246 aa18.2■□□□□ 0.5
PVT1-220ENST00000524165 ARHGAP20Q9P2F6 1191 aa18.2■□□□□ 0.5
PVT1-220ENST00000524165 ENTPD2Q9Y5L3 495 aa18.2■□□□□ 0.5
PVT1-220ENST00000524165 USP3Q9Y6I4 520 aa18.2■□□□□ 0.5
PVT1-220ENST00000524165 ICE1Q9Y2F5 2266 aa18.19■□□□□ 0.5
PVT1-220ENST00000524165 TBC1D3DA0A087WVF3 549 aa18.19■□□□□ 0.5
PVT1-220ENST00000524165 TBC1D3IA0A087WXS9 549 aa18.19■□□□□ 0.5
PVT1-220ENST00000524165 TBC1D3EA0A087X179 549 aa18.19■□□□□ 0.5
PVT1-220ENST00000524165 TBC1D3KA0A087X1G2 549 aa18.19■□□□□ 0.5
PVT1-220ENST00000524165 TBC1D3FA6NER0 549 aaPredicted RBP18.19■□□□□ 0.5
PVT1-220ENST00000524165 TBC1D3LB9A6J9 549 aa18.19■□□□□ 0.5
PVT1-220ENST00000524165 FFAR2O15552 330 aa18.19■□□□□ 0.5
PVT1-220ENST00000524165 TBC1D3HP0C7X1 549 aa18.19■□□□□ 0.5
PVT1-220ENST00000524165 ADORA2BP29275 332 aa18.19■□□□□ 0.5
PVT1-220ENST00000524165 AFMP43652 599 aa18.19■□□□□ 0.5
PVT1-220ENST00000524165 PPP2CBP62714 309 aa18.19■□□□□ 0.5
PVT1-220ENST00000524165 PPP2CAP67775 309 aa18.19■□□□□ 0.5
PVT1-220ENST00000524165 CYP24A1Q07973 514 aa18.19■□□□□ 0.5
PVT1-220ENST00000524165 STAT4Q14765 748 aa18.19■□□□□ 0.5
PVT1-220ENST00000524165 TBC1D3GQ6DHY5 549 aa18.19■□□□□ 0.5
PVT1-220ENST00000524165 TBC1D3CQ6IPX1 549 aa18.19■□□□□ 0.5
PVT1-220ENST00000524165 SCARA5Q6ZMJ2 495 aa18.19■□□□□ 0.5
PVT1-220ENST00000524165 SV2BQ7L1I2 683 aa18.19■□□□□ 0.5
PVT1-220ENST00000524165 UNC93AQ86WB7 457 aa18.19■□□□□ 0.5
PVT1-220ENST00000524165 TBC1D3Q8IZP1 549 aaPredicted RBP18.19■□□□□ 0.5
PVT1-220ENST00000524165 AADATQ8N5Z0 425 aa18.19■□□□□ 0.5
PVT1-220ENST00000524165 KDM1BQ8NB78 822 aa18.19■□□□□ 0.5
PVT1-220ENST00000524165 RDH13Q8NBN7 331 aa18.19■□□□□ 0.5
PVT1-220ENST00000524165 CCDC127Q96BQ5 260 aa18.19■□□□□ 0.5
PVT1-220ENST00000524165 TMA16Q96EY4 203 aaKnown RBP18.19■□□□□ 0.5
PVT1-220ENST00000524165 NLGN3Q9NZ94 848 aa18.19■□□□□ 0.5
PVT1-220ENST00000524165 STOML2Q9UJZ1 356 aa18.19■□□□□ 0.5
PVT1-220ENST00000524165 ITPR2Q14571 2701 aa18.19■□□□□ 0.5
PVT1-220ENST00000524165 DOPEY1Q5JWR5 2465 aa18.18■□□□□ 0.5
PVT1-220ENST00000524165 LY6G6EA0A0G2JKS1 128 aa18.18■□□□□ 0.5
PVT1-220ENST00000524165 SLC12A8A0AV02 714 aa18.18■□□□□ 0.5
PVT1-220ENST00000524165 TARSL2A2RTX5 802 aaKnown RBP18.18■□□□□ 0.5
PVT1-220ENST00000524165 PHACTR2O75167 634 aa18.18■□□□□ 0.5
PVT1-220ENST00000524165 IDEP14735 1019 aa18.18■□□□□ 0.5
PVT1-220ENST00000524165 TRIM21P19474 475 aaKnown RBP18.18■□□□□ 0.5
PVT1-220ENST00000524165 C5AR1P21730 350 aa18.18■□□□□ 0.5
PVT1-220ENST00000524165 NDST1P52848 882 aa18.18■□□□□ 0.5
PVT1-220ENST00000524165 TRIP4Q15650 581 aaPredicted RBP18.18■□□□□ 0.5
PVT1-220ENST00000524165 C9orf64Q5T6V5 341 aa18.18■□□□□ 0.5
PVT1-220ENST00000524165 TTC17Q96AE7 1141 aa18.18■□□□□ 0.5
PVT1-220ENST00000524165 SLC25A18Q9H1K4 315 aa18.18■□□□□ 0.5
PVT1-220ENST00000524165 KDM4CQ9H3R0 1056 aa18.18■□□□□ 0.5
PVT1-220ENST00000524165 KLHL11Q9NVR0 708 aa18.18■□□□□ 0.5
PVT1-220ENST00000524165 U3KQA8 63 aa18.18■□□□□ 0.5
PVT1-220ENST00000524165 RP1P56715 2156 aa18.18■□□□□ 0.5
PVT1-220ENST00000524165 STX6O43752 255 aa18.17■□□□□ 0.5
PVT1-220ENST00000524165 TNFSF15O95150 251 aa18.17■□□□□ 0.5
PVT1-220ENST00000524165 BMP15O95972 392 aa18.17■□□□□ 0.5
PVT1-220ENST00000524165 ADH1BP00325 375 aa18.17■□□□□ 0.5
PVT1-220ENST00000524165 ASLP04424 464 aa18.17■□□□□ 0.5
PVT1-220ENST00000524165 ITGA2BP08514 1039 aa18.17■□□□□ 0.5
PVT1-220ENST00000524165 TGM2P21980 687 aa18.17■□□□□ 0.5
PVT1-220ENST00000524165 CCR10P46092 362 aa18.17■□□□□ 0.5
PVT1-220ENST00000524165 MPP7Q5T2T1 576 aa18.17■□□□□ 0.5
PVT1-220ENST00000524165 STXBP4Q6ZWJ1 553 aa18.17■□□□□ 0.5
PVT1-220ENST00000524165 ARHGAP18Q8N392 663 aa18.17■□□□□ 0.5
PVT1-220ENST00000524165 ZNF557Q8N988 423 aaPredicted RBP18.17■□□□□ 0.5
PVT1-220ENST00000524165 WDR36Q8NI36 951 aaKnown RBP18.17■□□□□ 0.5
PVT1-220ENST00000524165 IFI44Q8TCB0 444 aa18.17■□□□□ 0.5
PVT1-220ENST00000524165 KLHDC7BQ96G42 594 aa18.17■□□□□ 0.5
PVT1-220ENST00000524165 ZSCAN31Q96LW9 406 aaPredicted RBP18.17■□□□□ 0.5
PVT1-220ENST00000524165 PANK4Q9NVE7 773 aa18.17■□□□□ 0.5
PVT1-220ENST00000524165 HMGXB4Q9UGU5 601 aa18.17■□□□□ 0.5
PVT1-220ENST00000524165 CYTH4Q9UIA0 394 aa18.17■□□□□ 0.5
PVT1-220ENST00000524165 PRAMEF26H0Y7S4 382 aa18.16■□□□□ 0.5
PVT1-220ENST00000524165 RIOK3O14730 519 aaKnown RBP18.16■□□□□ 0.5
PVT1-220ENST00000524165 PIAS2O75928 621 aa18.16■□□□□ 0.5
PVT1-220ENST00000524165 SLFN14P0C7P3 912 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 135.9 ms