RNA–Protein interactions for RNA: ENST00000522912.5

SREK1-212, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-212ENST00000522912 CFAP36Q96G28 342 aa17.32■□□□□ 0.36
SREK1-212ENST00000522912 SLC39A13Q96H72 371 aa17.32■□□□□ 0.36
SREK1-212ENST00000522912 CELF6Q96J87 481 aaKnown RBP17.32■□□□□ 0.36
SREK1-212ENST00000522912 SPATA17Q96L03 361 aa17.32■□□□□ 0.36
SREK1-212ENST00000522912 DHRS4Q9BTZ2 278 aa17.32■□□□□ 0.36
SREK1-212ENST00000522912 INTS9Q9NV88 658 aaKnown RBP17.32■□□□□ 0.36
SREK1-212ENST00000522912 TCRBV9S1A1TA0A576 114 aa17.31■□□□□ 0.36
SREK1-212ENST00000522912 RASA4BC9J798 803 aa17.31■□□□□ 0.36
SREK1-212ENST00000522912 RASA4O43374 803 aa17.31■□□□□ 0.36
SREK1-212ENST00000522912 RTN3O95197 1032 aaPredicted RBP17.31■□□□□ 0.36
SREK1-212ENST00000522912 MOCS2O96007 188 aaPredicted RBP17.31■□□□□ 0.36
SREK1-212ENST00000522912 BRAFP15056 766 aa17.31■□□□□ 0.36
SREK1-212ENST00000522912 GARSP41250 739 aaKnown RBP17.31■□□□□ 0.36
SREK1-212ENST00000522912 SMARCB1Q12824 385 aa17.31■□□□□ 0.36
SREK1-212ENST00000522912 TAF10Q12962 218 aa17.31■□□□□ 0.36
SREK1-212ENST00000522912 PARP6Q2NL67 630 aa17.31■□□□□ 0.36
SREK1-212ENST00000522912 C14orf80Q86SX3 495 aa17.31■□□□□ 0.36
SREK1-212ENST00000522912 MPP5Q8N3R9 675 aa17.31■□□□□ 0.36
SREK1-212ENST00000522912 PDCD7Q8N8D1 485 aaKnown RBP17.31■□□□□ 0.36
SREK1-212ENST00000522912 PAFAH2Q99487 392 aa17.31■□□□□ 0.36
SREK1-212ENST00000522912 BRD8Q9H0E9 1235 aa17.31■□□□□ 0.36
SREK1-212ENST00000522912 IGSF9Q9P2J2 1179 aa17.31■□□□□ 0.36
SREK1-212ENST00000522912 PSMC3IPQ9P2W1 217 aaPredicted RBP17.31■□□□□ 0.36
SREK1-212ENST00000522912 TLR6Q9Y2C9 796 aa17.31■□□□□ 0.36
SREK1-212ENST00000522912 ACTL7BQ9Y614 415 aa17.31■□□□□ 0.36
SREK1-212ENST00000522912 HS3ST4Q9Y661 456 aa17.31■□□□□ 0.36
SREK1-212ENST00000522912 WDR27A2RRH5 827 aa17.31■□□□□ 0.36
SREK1-212ENST00000522912 GMNCA6NCL1 334 aa17.31■□□□□ 0.36
SREK1-212ENST00000522912 TBX18O95935 607 aa17.31■□□□□ 0.36
SREK1-212ENST00000522912 RPL17P18621 184 aaKnown RBP17.31■□□□□ 0.36
SREK1-212ENST00000522912 MX2P20592 715 aa17.31■□□□□ 0.36
SREK1-212ENST00000522912 KLHL38Q2WGJ6 581 aa17.31■□□□□ 0.36
SREK1-212ENST00000522912 USP41Q3LFD5 358 aa17.31■□□□□ 0.36
SREK1-212ENST00000522912 ADGRD1Q6QNK2 874 aa17.31■□□□□ 0.36
SREK1-212ENST00000522912 PID1Q7Z2X4 250 aa17.31■□□□□ 0.36
SREK1-212ENST00000522912 TMCO2Q7Z6W1 182 aaPredicted RBP17.31■□□□□ 0.36
SREK1-212ENST00000522912 RNF168Q8IYW5 571 aaPredicted RBP17.31■□□□□ 0.36
SREK1-212ENST00000522912 LRRC39Q96DD0 335 aa17.31■□□□□ 0.36
SREK1-212ENST00000522912 IGSF21Q96ID5 467 aa17.31■□□□□ 0.36
SREK1-212ENST00000522912 CCT8L2Q96SF2 557 aa17.31■□□□□ 0.36
SREK1-212ENST00000522912 OXCT2Q9BYC2 517 aaPredicted RBP17.31■□□□□ 0.36
SREK1-212ENST00000522912 XAB2Q9HCS7 855 aaKnown RBP17.31■□□□□ 0.36
SREK1-212ENST00000522912 KCNK9Q9NPC2 374 aa17.31■□□□□ 0.36
SREK1-212ENST00000522912 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.31■□□□□ 0.365e-6■□□□□ 10.9
SREK1-212ENST00000522912 MTRRQ9UBK8 725 aa17.31■□□□□ 0.36
SREK1-212ENST00000522912 ZC3H7BQ9UGR2 993 aaKnown RBP17.31■□□□□ 0.36
SREK1-212ENST00000522912 TTLL3Q9Y4R7 772 aa17.31■□□□□ 0.36
SREK1-212ENST00000522912 C1QAP02745 245 aa17.3■□□□□ 0.36
SREK1-212ENST00000522912 CLTBP09497 229 aa17.3■□□□□ 0.36
SREK1-212ENST00000522912 CDK16Q00536 496 aa17.3■□□□□ 0.36
SREK1-212ENST00000522912 EFEMP1Q12805 493 aa17.3■□□□□ 0.36
SREK1-212ENST00000522912 LRRC26Q2I0M4 334 aa17.3■□□□□ 0.36
SREK1-212ENST00000522912 PIK3R6Q5UE93 754 aa17.3■□□□□ 0.36
SREK1-212ENST00000522912 SLC8B1Q6J4K2 584 aa17.3■□□□□ 0.36
SREK1-212ENST00000522912 PRPF39Q86UA1 669 aaKnown RBP17.3■□□□□ 0.36
SREK1-212ENST00000522912 ARHGAP12Q8IWW6 846 aa17.3■□□□□ 0.36
SREK1-212ENST00000522912 GIPC2Q8TF65 315 aa17.3■□□□□ 0.36
SREK1-212ENST00000522912 C2orf15Q8WU43 125 aaKnown RBP17.3■□□□□ 0.36
SREK1-212ENST00000522912 DCAKDQ8WVC6 231 aa17.3■□□□□ 0.36
SREK1-212ENST00000522912 DPF3Q92784 378 aa17.3■□□□□ 0.36
SREK1-212ENST00000522912 TBC1D31Q96DN5 1066 aa17.3■□□□□ 0.36
SREK1-212ENST00000522912 CYTH2Q99418 400 aa17.3■□□□□ 0.36
SREK1-212ENST00000522912 GORASP1Q9BQQ3 440 aa17.3■□□□□ 0.36
SREK1-212ENST00000522912 EIF2B3Q9NR50 452 aaKnown RBP17.3■□□□□ 0.36
SREK1-212ENST00000522912 CLIC5Q9NZA1 410 aa17.3■□□□□ 0.36
SREK1-212ENST00000522912 KLHL8Q9P2G9 620 aaPredicted RBP17.3■□□□□ 0.36
SREK1-212ENST00000522912 MRPL42Q9Y6G3 142 aaKnown RBP17.3■□□□□ 0.36
SREK1-212ENST00000522912 DOCK4Q8N1I0 1966 aa17.3■□□□□ 0.36
SREK1-212ENST00000522912 NDUFAB1O14561 156 aa17.3■□□□□ 0.36
SREK1-212ENST00000522912 SPAG6O75602 509 aa17.3■□□□□ 0.36
SREK1-212ENST00000522912 ATF6P18850 670 aa17.3■□□□□ 0.36
SREK1-212ENST00000522912 ITGB8P26012 769 aa17.3■□□□□ 0.36
SREK1-212ENST00000522912 HTR7P34969 479 aa17.3■□□□□ 0.36
SREK1-212ENST00000522912 MLLT6P55198 1093 aaPredicted RBP17.3■□□□□ 0.36
SREK1-212ENST00000522912 TBX4P57082 545 aa17.3■□□□□ 0.36
SREK1-212ENST00000522912 ZBTB17Q13105 803 aa17.3■□□□□ 0.36
SREK1-212ENST00000522912 NR1H3Q13133 447 aa17.3■□□□□ 0.36
SREK1-212ENST00000522912 PSMD5Q16401 504 aa17.3■□□□□ 0.36
SREK1-212ENST00000522912 KBTBD12Q3ZCT8 623 aa17.3■□□□□ 0.36
SREK1-212ENST00000522912 ZSCAN18Q8TBC5 510 aaPredicted RBP17.3■□□□□ 0.36
SREK1-212ENST00000522912 TOP1MTQ969P6 601 aa17.3■□□□□ 0.36
SREK1-212ENST00000522912 EBNA1BP2Q99848 306 aaKnown RBP17.3■□□□□ 0.36
SREK1-212ENST00000522912 TRIM56Q9BRZ2 755 aaKnown RBP17.3■□□□□ 0.36
SREK1-212ENST00000522912 KIF9Q9HAQ2 790 aa17.3■□□□□ 0.36
SREK1-212ENST00000522912 TLR8Q9NR97 1041 aaKnown RBP17.3■□□□□ 0.36
SREK1-212ENST00000522912 PCDH10Q9P2E7 1040 aa17.3■□□□□ 0.36
SREK1-212ENST00000522912 NYNRINQ9P2P1 1898 aaKnown RBP17.29■□□□□ 0.36
SREK1-212ENST00000522912 A0A1W2PPM1 405 aa17.29■□□□□ 0.36
SREK1-212ENST00000522912 E9PAM4 449 aa17.29■□□□□ 0.36
SREK1-212ENST00000522912 ZBTB24O43167 697 aaPredicted RBP17.29■□□□□ 0.36
SREK1-212ENST00000522912 ZNF189O75820 626 aaPredicted RBP17.29■□□□□ 0.36
SREK1-212ENST00000522912 KRT15P19012 456 aa17.29■□□□□ 0.36
SREK1-212ENST00000522912 CD68P34810 354 aaPredicted RBP17.29■□□□□ 0.36
SREK1-212ENST00000522912 OR1D2P34982 312 aa17.29■□□□□ 0.36
SREK1-212ENST00000522912 CCT5P48643 541 aa17.29■□□□□ 0.36
SREK1-212ENST00000522912 TUBP50607 506 aa17.29■□□□□ 0.36
SREK1-212ENST00000522912 RPL10AP62906 217 aaKnown RBP17.29■□□□□ 0.36
SREK1-212ENST00000522912 SARNPP82979 210 aaKnown RBP17.29■□□□□ 0.36
SREK1-212ENST00000522912 NRG1Q02297 640 aaPredicted RBP17.29■□□□□ 0.36
SREK1-212ENST00000522912 UNC5AQ6ZN44 842 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 139.1 ms