RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 TSHZ1Q6ZSZ6 1077 aa18.19■□□□□ 0.5
NUP54-205ENST00000507257 ZNF781Q8N8C0 355 aa18.19■□□□□ 0.5
NUP54-205ENST00000507257 MTMR14Q8NCE2 650 aa18.19■□□□□ 0.5
NUP54-205ENST00000507257 FNDC8Q8TC99 324 aa18.19■□□□□ 0.5
NUP54-205ENST00000507257 GMLQ99445 158 aa18.19■□□□□ 0.5
NUP54-205ENST00000507257 TCHPQ9BT92 498 aa18.19■□□□□ 0.5
NUP54-205ENST00000507257 ELOVL4Q9GZR5 314 aa18.19■□□□□ 0.5
NUP54-205ENST00000507257 NXF1Q9UBU9 619 aaKnown RBP18.19■□□□□ 0.5
NUP54-205ENST00000507257 MID2Q9UJV3 735 aa18.19■□□□□ 0.5
NUP54-205ENST00000507257 APPL1Q9UKG1 709 aa18.19■□□□□ 0.5
NUP54-205ENST00000507257 FER1L6Q2WGJ9 1857 aa18.18■□□□□ 0.5
NUP54-205ENST00000507257 WDR27A2RRH5 827 aa18.18■□□□□ 0.5
NUP54-205ENST00000507257 HACD1B0YJ81 288 aa18.18■□□□□ 0.5
NUP54-205ENST00000507257 E9PBE3 544 aa18.18■□□□□ 0.5
NUP54-205ENST00000507257 KLHL41O60662 606 aa18.18■□□□□ 0.5
NUP54-205ENST00000507257 HSPA4LO95757 839 aa18.18■□□□□ 0.5
NUP54-205ENST00000507257 PSMC3P17980 439 aa18.18■□□□□ 0.5
NUP54-205ENST00000507257 XRCC1P18887 633 aaPredicted RBP18.18■□□□□ 0.5
NUP54-205ENST00000507257 TYK2P29597 1187 aa18.18■□□□□ 0.5
NUP54-205ENST00000507257 PRKAA2P54646 552 aa18.18■□□□□ 0.5
NUP54-205ENST00000507257 PRKG1Q13976 671 aa18.18■□□□□ 0.5
NUP54-205ENST00000507257 FRG1Q14331 258 aaKnown RBP18.18■□□□□ 0.5
NUP54-205ENST00000507257 ZBTB33Q86T24 672 aa18.18■□□□□ 0.5
NUP54-205ENST00000507257 BBS5Q8N3I7 341 aa18.18■□□□□ 0.5
NUP54-205ENST00000507257 NLRP7Q8WX94 980 aa18.18■□□□□ 0.5
NUP54-205ENST00000507257 ARNTL2Q8WYA1 636 aa18.18■□□□□ 0.5
NUP54-205ENST00000507257 ZNF597Q96LX8 424 aa18.18■□□□□ 0.5
NUP54-205ENST00000507257 SNRNP25Q9BV90 132 aaKnown RBP18.18■□□□□ 0.5
NUP54-205ENST00000507257 TMEM39BQ9GZU3 492 aa18.18■□□□□ 0.5
NUP54-205ENST00000507257 PRDM16Q9HAZ2 1276 aa18.18■□□□□ 0.5
NUP54-205ENST00000507257 GBA2Q9HCG7 927 aaPredicted RBP18.18■□□□□ 0.5
NUP54-205ENST00000507257 KIAA1257Q9ULG3 409 aa18.18■□□□□ 0.5
NUP54-205ENST00000507257 G3BP2Q9UN86 482 aaKnown RBP18.18■□□□□ 0.5
NUP54-205ENST00000507257 NR2E3Q9Y5X4 410 aa18.18■□□□□ 0.5
NUP54-205ENST00000507257 MAFO75444 373 aaPredicted RBP18.17■□□□□ 0.5
NUP54-205ENST00000507257 IL18RAPO95256 599 aa18.17■□□□□ 0.5
NUP54-205ENST00000507257 ZNF26P17031 533 aaPredicted RBP18.17■□□□□ 0.5
NUP54-205ENST00000507257 CYP2F1P24903 491 aa18.17■□□□□ 0.5
NUP54-205ENST00000507257 ATICP31939 592 aa18.17■□□□□ 0.5
NUP54-205ENST00000507257 GRIA1P42261 906 aa18.17■□□□□ 0.5
NUP54-205ENST00000507257 RAP1GAPP47736 663 aa18.17■□□□□ 0.5
NUP54-205ENST00000507257 PSMD8P48556 350 aa18.17■□□□□ 0.5
NUP54-205ENST00000507257 CDKL1Q00532 357 aa18.17■□□□□ 0.5
NUP54-205ENST00000507257 DPYSL2Q16555 572 aa18.17■□□□□ 0.5
NUP54-205ENST00000507257 IYDQ6PHW0 289 aa18.17■□□□□ 0.5
NUP54-205ENST00000507257 FAM183BPQ6ZVS7 135 aa18.17■□□□□ 0.5
NUP54-205ENST00000507257 SNX32Q86XE0 403 aa18.17■□□□□ 0.5
NUP54-205ENST00000507257 PDCD6IPQ8WUM4 868 aaKnown RBP18.17■□□□□ 0.5
NUP54-205ENST00000507257 TOP1MTQ969P6 601 aa18.17■□□□□ 0.5
NUP54-205ENST00000507257 TWNKQ96RR1 684 aa18.17■□□□□ 0.5
NUP54-205ENST00000507257 CDRT15Q96T59 188 aa18.17■□□□□ 0.5
NUP54-205ENST00000507257 PKP2Q99959 881 aa18.17■□□□□ 0.5
NUP54-205ENST00000507257 OSBPL11Q9BXB4 747 aa18.17■□□□□ 0.5
NUP54-205ENST00000507257 RHBDL2Q9NX52 303 aa18.17■□□□□ 0.5
NUP54-205ENST00000507257 HACD3Q9P035 362 aa18.17■□□□□ 0.5
NUP54-205ENST00000507257 MGAMO43451 1857 aa18.17■□□□□ 0.5
NUP54-205ENST00000507257 A0A0A0MRY4 1105 aa18.17■□□□□ 0.5
NUP54-205ENST00000507257 H3BSA7 217 aa18.17■□□□□ 0.5
NUP54-205ENST00000507257 MATN2O00339 956 aa18.17■□□□□ 0.5
NUP54-205ENST00000507257 ACOT8O14734 319 aa18.17■□□□□ 0.5
NUP54-205ENST00000507257 AIM2O14862 343 aa18.17■□□□□ 0.5
NUP54-205ENST00000507257 ADCY6O43306 1168 aa18.17■□□□□ 0.5
NUP54-205ENST00000507257 MPOP05164 745 aa18.17■□□□□ 0.5
NUP54-205ENST00000507257 SP4Q02446 784 aa18.17■□□□□ 0.5
NUP54-205ENST00000507257 LCLAT1Q6UWP7 414 aa18.17■□□□□ 0.5
NUP54-205ENST00000507257 CLEC14AQ86T13 490 aa18.17■□□□□ 0.5
NUP54-205ENST00000507257 TTC39CQ8N584 583 aa18.17■□□□□ 0.5
NUP54-205ENST00000507257 CNTD1Q8N815 330 aa18.17■□□□□ 0.5
NUP54-205ENST00000507257 TDRD5Q8NAT2 981 aaKnown RBP18.17■□□□□ 0.5
NUP54-205ENST00000507257 TSPAN14Q8NG11 270 aa18.17■□□□□ 0.5
NUP54-205ENST00000507257 MAPK15Q8TD08 544 aa18.17■□□□□ 0.5
NUP54-205ENST00000507257 SPATA13Q96N96 652 aa18.17■□□□□ 0.5
NUP54-205ENST00000507257 OR52B2Q96RD2 323 aa18.17■□□□□ 0.5
NUP54-205ENST00000507257 ILKAPQ9H0C8 392 aaPredicted RBP18.17■□□□□ 0.5
NUP54-205ENST00000507257 RNPEPQ9H4A4 650 aa18.17■□□□□ 0.5
NUP54-205ENST00000507257 COPS7BQ9H9Q2 264 aaPredicted RBP18.17■□□□□ 0.5
NUP54-205ENST00000507257 MRPL40Q9NQ50 206 aaKnown RBP18.17■□□□□ 0.5
NUP54-205ENST00000507257 SNX15Q9NRS6 342 aa18.17■□□□□ 0.5
NUP54-205ENST00000507257 RAP2CQ9Y3L5 183 aa18.17■□□□□ 0.5
NUP54-205ENST00000507257 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.16■□□□□ 0.5
NUP54-205ENST00000507257 TTC36A6NLP5 189 aa18.16■□□□□ 0.5
NUP54-205ENST00000507257 SLCO1B7G3V0H7 640 aa18.16■□□□□ 0.5
NUP54-205ENST00000507257 G3V2L1 256 aa18.16■□□□□ 0.5
NUP54-205ENST00000507257 ZNF701M0R085 212 aaPredicted RBP18.16■□□□□ 0.5
NUP54-205ENST00000507257 HDAC3O15379 428 aa18.16■□□□□ 0.5
NUP54-205ENST00000507257 TRIM13O60858 407 aa18.16■□□□□ 0.5
NUP54-205ENST00000507257 APOA4P06727 396 aa18.16■□□□□ 0.5
NUP54-205ENST00000507257 P4HA1P13674 534 aa18.16■□□□□ 0.5
NUP54-205ENST00000507257 HSPA1LP34931 641 aa18.16■□□□□ 0.5
NUP54-205ENST00000507257 PPARGP37231 505 aaPredicted RBP18.16■□□□□ 0.5
NUP54-205ENST00000507257 CEACAM7Q14002 265 aa18.16■□□□□ 0.5
NUP54-205ENST00000507257 RAB6CQ53S08 254 aa18.16■□□□□ 0.5
NUP54-205ENST00000507257 SPANXN3Q5MJ09 141 aa18.16■□□□□ 0.5
NUP54-205ENST00000507257 C6orf52Q5T4I8 152 aa18.16■□□□□ 0.5
NUP54-205ENST00000507257 HEATR6Q6AI08 1181 aaKnown RBP18.16■□□□□ 0.5
NUP54-205ENST00000507257 MPZL3Q6UWV2 235 aa18.16■□□□□ 0.5
NUP54-205ENST00000507257 UNC5BQ8IZJ1 945 aa18.16■□□□□ 0.5
NUP54-205ENST00000507257 TTLL6Q8N841 843 aa18.16■□□□□ 0.5
NUP54-205ENST00000507257 HM13Q8TCT9 377 aa18.16■□□□□ 0.5
NUP54-205ENST00000507257 RAB6CQ9H0N0 254 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms