RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 H0Y626 953 aa8.56□□□□□ -1.04
HDAC6-221ENST00000477561 TIMM44O43615 452 aa8.56□□□□□ -1.04
HDAC6-221ENST00000477561 GDF9O60383 454 aa8.56□□□□□ -1.04
HDAC6-221ENST00000477561 SYNCRIPO60506 623 aaKnown RBP8.56□□□□□ -1.04
HDAC6-221ENST00000477561 GJB6O95452 261 aa8.56□□□□□ -1.04
HDAC6-221ENST00000477561 LSM8O95777 96 aaKnown RBP8.56□□□□□ -1.04
HDAC6-221ENST00000477561 EPHX1P07099 455 aa8.56□□□□□ -1.04
HDAC6-221ENST00000477561 POLR2EP19388 210 aaKnown RBP8.56□□□□□ -1.04
HDAC6-221ENST00000477561 ABCB4P21439 1286 aa8.56□□□□□ -1.04
HDAC6-221ENST00000477561 PRKCHP24723 683 aa8.56□□□□□ -1.04
HDAC6-221ENST00000477561 CCR1P32246 355 aa8.56□□□□□ -1.04
HDAC6-221ENST00000477561 FLT3P36888 993 aa8.56□□□□□ -1.04
HDAC6-221ENST00000477561 MPLP40238 635 aa8.56□□□□□ -1.04
HDAC6-221ENST00000477561 MATKP42679 507 aa8.56□□□□□ -1.04
HDAC6-221ENST00000477561 ATXN1P54253 815 aaKnown RBP8.56□□□□□ -1.04
HDAC6-221ENST00000477561 NOMO3P69849 1222 aa8.56□□□□□ -1.04
HDAC6-221ENST00000477561 FMO1Q01740 532 aa8.56□□□□□ -1.04
HDAC6-221ENST00000477561 CDR2Q01850 454 aa8.56□□□□□ -1.04
HDAC6-221ENST00000477561 LMAN2Q12907 356 aa8.56□□□□□ -1.04
HDAC6-221ENST00000477561 CDH18Q13634 790 aa8.56□□□□□ -1.04
HDAC6-221ENST00000477561 STARD3Q14849 445 aa8.56□□□□□ -1.04
HDAC6-221ENST00000477561 EIF4HQ15056 248 aaKnown RBP8.56□□□□□ -1.04
HDAC6-221ENST00000477561 CSRP2Q16527 193 aa8.56□□□□□ -1.04
HDAC6-221ENST00000477561 TSR1Q2NL82 804 aaKnown RBP8.56□□□□□ -1.04
HDAC6-221ENST00000477561 FNDC3BQ53EP0 1204 aaKnown RBP8.56□□□□□ -1.04
HDAC6-221ENST00000477561 FSCBQ5H9T9 825 aa8.56□□□□□ -1.04
HDAC6-221ENST00000477561 FIGNQ5HY92 759 aa8.56□□□□□ -1.04
HDAC6-221ENST00000477561 MPP7Q5T2T1 576 aa8.56□□□□□ -1.04
HDAC6-221ENST00000477561 OTUD1Q5VV17 481 aaPredicted RBP8.56□□□□□ -1.04
HDAC6-221ENST00000477561 PMS2CLQ68D20 193 aa8.56□□□□□ -1.04
HDAC6-221ENST00000477561 TCEAL6Q6IPX3 200 aa8.56□□□□□ -1.04
HDAC6-221ENST00000477561 SERPINA13PQ6UXR4 307 aa8.56□□□□□ -1.04
HDAC6-221ENST00000477561 PRR23CQ6ZRP0 262 aa8.56□□□□□ -1.04
HDAC6-221ENST00000477561 C14orf80Q86SX3 495 aa8.56□□□□□ -1.04
HDAC6-221ENST00000477561 ZDHHC17Q8IUH5 632 aa8.56□□□□□ -1.04
HDAC6-221ENST00000477561 CCDC117Q8IWD4 279 aaPredicted RBP8.56□□□□□ -1.04
HDAC6-221ENST00000477561 LRRC8AQ8IWT6 810 aa8.56□□□□□ -1.04
HDAC6-221ENST00000477561 AHI1Q8N157 1196 aa8.56□□□□□ -1.04
HDAC6-221ENST00000477561 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.56□□□□□ -1.04
HDAC6-221ENST00000477561 ZNF397Q8NF99 534 aaPredicted RBP8.56□□□□□ -1.04
HDAC6-221ENST00000477561 SLC30A5Q8TAD4 765 aa8.56□□□□□ -1.04
HDAC6-221ENST00000477561 FIBINQ8TAL6 211 aa8.56□□□□□ -1.04
HDAC6-221ENST00000477561 WFIKKN2Q8TEU8 576 aa8.56□□□□□ -1.04
HDAC6-221ENST00000477561 TCEAL3Q969E4 200 aa8.56□□□□□ -1.04
HDAC6-221ENST00000477561 LOXL4Q96JB6 756 aa8.56□□□□□ -1.04
HDAC6-221ENST00000477561 BTN2A3PQ96KV6 586 aa8.56□□□□□ -1.04
HDAC6-221ENST00000477561 SPACA7Q96KW9 195 aa8.56□□□□□ -1.04
HDAC6-221ENST00000477561 MRGPRX1Q96LB2 322 aa8.56□□□□□ -1.04
HDAC6-221ENST00000477561 PCDHB18PQ96TA0 734 aa8.56□□□□□ -1.04
HDAC6-221ENST00000477561 TBCBQ99426 244 aa8.56□□□□□ -1.04
HDAC6-221ENST00000477561 MKRN2Q9H000 416 aaKnown RBP8.56□□□□□ -1.04
HDAC6-221ENST00000477561 SIK2Q9H0K1 926 aa8.56□□□□□ -1.04
HDAC6-221ENST00000477561 MTG2Q9H4K7 406 aa8.56□□□□□ -1.04
HDAC6-221ENST00000477561 TMPRSS4Q9NRS4 437 aa8.56□□□□□ -1.04
HDAC6-221ENST00000477561 RXFP3Q9NSD7 469 aa8.56□□□□□ -1.04
HDAC6-221ENST00000477561 PIGVQ9NUD9 493 aa8.56□□□□□ -1.04
HDAC6-221ENST00000477561 SEPT11Q9NVA2 429 aaKnown RBP8.56□□□□□ -1.04
HDAC6-221ENST00000477561 PLA2G4CQ9UP65 541 aa8.56□□□□□ -1.04
HDAC6-221ENST00000477561 ZKSCAN5Q9Y2L8 839 aa8.56□□□□□ -1.04
HDAC6-221ENST00000477561 SNX10Q9Y5X0 201 aa8.56□□□□□ -1.04
HDAC6-221ENST00000477561 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.56□□□□□ -1.04
HDAC6-221ENST00000477561 IGHV1OR15-9A0A0B4J2B8 117 aa8.55□□□□□ -1.04
HDAC6-221ENST00000477561 A0A1W2PQJ5 194 aa8.55□□□□□ -1.04
HDAC6-221ENST00000477561 F5H5T6 163 aa8.55□□□□□ -1.04
HDAC6-221ENST00000477561 LRP3O75074 770 aa8.55□□□□□ -1.04
HDAC6-221ENST00000477561 PAGE1O75459 146 aa8.55□□□□□ -1.04
HDAC6-221ENST00000477561 LUC7L3O95232 432 aaKnown RBP8.55□□□□□ -1.04
HDAC6-221ENST00000477561 CYP1A1P04798 512 aaPredicted RBP8.55□□□□□ -1.04
HDAC6-221ENST00000477561 SLC2A3P11169 496 aa8.55□□□□□ -1.04
HDAC6-221ENST00000477561 CSKP41240 450 aa8.55□□□□□ -1.04
HDAC6-221ENST00000477561 PTGER3P43115 390 aa8.55□□□□□ -1.04
HDAC6-221ENST00000477561 CTSOP43234 321 aaPredicted RBP8.55□□□□□ -1.04
HDAC6-221ENST00000477561 IRAK1P51617 712 aa8.55□□□□□ -1.04
HDAC6-221ENST00000477561 RPL6Q02878 288 aaKnown RBP8.55□□□□□ -1.04
HDAC6-221ENST00000477561 CENPCQ03188 943 aa8.55□□□□□ -1.04
HDAC6-221ENST00000477561 LMNB2Q03252 620 aa8.55□□□□□ -1.04
HDAC6-221ENST00000477561 DEUP1Q05D60 604 aa8.55□□□□□ -1.04
HDAC6-221ENST00000477561 ENPP2Q13822 863 aa8.55□□□□□ -1.04
HDAC6-221ENST00000477561 AUHQ13825 339 aaKnown RBP8.55□□□□□ -1.04
HDAC6-221ENST00000477561 BYSLQ13895 437 aaKnown RBP8.55□□□□□ -1.04
HDAC6-221ENST00000477561 PTPRNQ16849 979 aa8.55□□□□□ -1.04
HDAC6-221ENST00000477561 AASDHQ4L235 1098 aaPredicted RBP8.55□□□□□ -1.04
HDAC6-221ENST00000477561 RNF43Q68DV7 783 aa8.55□□□□□ -1.04
HDAC6-221ENST00000477561 TRNP1Q6NT89 227 aa8.55□□□□□ -1.04
HDAC6-221ENST00000477561 FBXL22Q6P050 247 aa8.55□□□□□ -1.04
HDAC6-221ENST00000477561 LPCAT2Q7L5N7 544 aa8.55□□□□□ -1.04
HDAC6-221ENST00000477561 KIAA0907Q7Z7F0 614 aaPredicted RBP8.55□□□□□ -1.04
HDAC6-221ENST00000477561 C11orf74Q86VG3 221 aa8.55□□□□□ -1.04
HDAC6-221ENST00000477561 ZNF677Q86XU0 584 aa8.55□□□□□ -1.04
HDAC6-221ENST00000477561 TMPRSS6Q8IU80 811 aa8.55□□□□□ -1.04
HDAC6-221ENST00000477561 APCDD1Q8J025 514 aa8.55□□□□□ -1.04
HDAC6-221ENST00000477561 EMC1Q8N766 993 aa8.55□□□□□ -1.04
HDAC6-221ENST00000477561 C12orf50Q8NA57 414 aaPredicted RBP8.55□□□□□ -1.04
HDAC6-221ENST00000477561 MSANTD4Q8NCY6 345 aa8.55□□□□□ -1.04
HDAC6-221ENST00000477561 PIGKQ92643 395 aa8.55□□□□□ -1.04
HDAC6-221ENST00000477561 IGSF8Q969P0 613 aa8.55□□□□□ -1.04
HDAC6-221ENST00000477561 LMLNQ96KR4 655 aa8.55□□□□□ -1.04
HDAC6-221ENST00000477561 RPRD1AQ96P16 312 aaPredicted RBP8.55□□□□□ -1.04
HDAC6-221ENST00000477561 PANX2Q96RD6 677 aa8.55□□□□□ -1.04
HDAC6-221ENST00000477561 NPY6RQ99463 290 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms