RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 GOLGA6L7A0A1B0GV03 622 aa6.4□□□□□ -1.38
CLK1-210ENST00000473565 SLC12A8A0AV02 714 aa6.4□□□□□ -1.38
CLK1-210ENST00000473565 SLC38A8A6NNN8 435 aa6.4□□□□□ -1.38
CLK1-210ENST00000473565 E7ESA3 106 aa6.4□□□□□ -1.38
CLK1-210ENST00000473565 E9PAM4 449 aa6.4□□□□□ -1.38
CLK1-210ENST00000473565 PPP1R12AO14974 1030 aaPredicted RBP6.4□□□□□ -1.38
CLK1-210ENST00000473565 EIF3HO15372 352 aaKnown RBP eCLIP6.4□□□□□ -1.38
CLK1-210ENST00000473565 ZBTB24O43167 697 aaPredicted RBP6.4□□□□□ -1.38
CLK1-210ENST00000473565 SPAG7O75391 227 aa6.4□□□□□ -1.38
CLK1-210ENST00000473565 FAM155BO75949 473 aa6.4□□□□□ -1.38
CLK1-210ENST00000473565 CNTN5O94779 1100 aa6.4□□□□□ -1.38
CLK1-210ENST00000473565 AGTP01019 485 aa6.4□□□□□ -1.38
CLK1-210ENST00000473565 JCHAINP01591 159 aa6.4□□□□□ -1.38
CLK1-210ENST00000473565 F7P08709 466 aaPredicted RBP6.4□□□□□ -1.38
CLK1-210ENST00000473565 MAGEA11P43364 429 aa6.4□□□□□ -1.38
CLK1-210ENST00000473565 KCNQ1P51787 676 aa6.4□□□□□ -1.38
CLK1-210ENST00000473565 TBX4P57082 545 aa6.4□□□□□ -1.38
CLK1-210ENST00000473565 SESN2P58004 480 aaPredicted RBP6.4□□□□□ -1.38
CLK1-210ENST00000473565 ELAVL2Q12926 359 aaKnown RBP6.4□□□□□ -1.38
CLK1-210ENST00000473565 STAT4Q14765 748 aa6.4□□□□□ -1.38
CLK1-210ENST00000473565 PKN2Q16513 984 aaKnown RBP6.4□□□□□ -1.38
CLK1-210ENST00000473565 LEKR1Q6ZMV7 388 aa6.4□□□□□ -1.38
CLK1-210ENST00000473565 TTC16Q8NEE8 873 aa6.4□□□□□ -1.38
CLK1-210ENST00000473565 SPPL2BQ8TCT7 592 aa6.4□□□□□ -1.38
CLK1-210ENST00000473565 XPO6Q96QU8 1125 aaKnown RBP6.4□□□□□ -1.38
CLK1-210ENST00000473565 KLF6Q99612 283 aaPredicted RBP6.4□□□□□ -1.38
CLK1-210ENST00000473565 GORASP1Q9BQQ3 440 aa6.4□□□□□ -1.38
CLK1-210ENST00000473565 FBXO44Q9H4M3 255 aa6.4□□□□□ -1.38
CLK1-210ENST00000473565 CYP4F11Q9HBI6 524 aa6.4□□□□□ -1.38
CLK1-210ENST00000473565 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.4□□□□□ -1.38
CLK1-210ENST00000473565 IL1RAPL1Q9NZN1 696 aa6.4□□□□□ -1.38
CLK1-210ENST00000473565 SLC17A6Q9P2U8 582 aa6.4□□□□□ -1.38
CLK1-210ENST00000473565 MTRRQ9UBK8 725 aa6.4□□□□□ -1.38
CLK1-210ENST00000473565 RABGEF1Q9UJ41 708 aa6.4□□□□□ -1.38
CLK1-210ENST00000473565 TEX264Q9Y6I9 313 aa6.4□□□□□ -1.38
CLK1-210ENST00000473565 A0A1W2PPM1 405 aa6.4□□□□□ -1.39
CLK1-210ENST00000473565 TCRBV9S1A1TA0A576 114 aa6.4□□□□□ -1.39
CLK1-210ENST00000473565 KCNU1A8MYU2 1149 aa6.4□□□□□ -1.39
CLK1-210ENST00000473565 H7C4K7 107 aa6.4□□□□□ -1.39
CLK1-210ENST00000473565 UGT1A9O60656 530 aa6.4□□□□□ -1.39
CLK1-210ENST00000473565 CAPN15O75808 1086 aa6.4□□□□□ -1.39
CLK1-210ENST00000473565 GJB5O95377 273 aa6.4□□□□□ -1.39
CLK1-210ENST00000473565 TIMP1P01033 207 aa6.4□□□□□ -1.39
CLK1-210ENST00000473565 AIF1P55008 147 aa6.4□□□□□ -1.39
CLK1-210ENST00000473565 ALFQ53S48 1182 aa6.4□□□□□ -1.39
CLK1-210ENST00000473565 TNFAIP8L3Q5GJ75 292 aa6.4□□□□□ -1.39
CLK1-210ENST00000473565 RAP1GAP2Q684P5 730 aa6.4□□□□□ -1.39
CLK1-210ENST00000473565 MFSD5Q6N075 450 aa6.4□□□□□ -1.39
CLK1-210ENST00000473565 TRMT10BQ6PF06 316 aaKnown RBP6.4□□□□□ -1.39
CLK1-210ENST00000473565 CES3Q6UWW8 571 aa6.4□□□□□ -1.39
CLK1-210ENST00000473565 OTOP3Q7RTS5 596 aa6.4□□□□□ -1.39
CLK1-210ENST00000473565 ARHGAP12Q8IWW6 846 aa6.4□□□□□ -1.39
CLK1-210ENST00000473565 C4orf33Q8N1A6 199 aa6.4□□□□□ -1.39
CLK1-210ENST00000473565 DNAJC5GQ8N7S2 189 aa6.4□□□□□ -1.39
CLK1-210ENST00000473565 ATP11CQ8NB49 1132 aa6.4□□□□□ -1.39
CLK1-210ENST00000473565 ARMC5Q96C12 935 aa6.4□□□□□ -1.39
CLK1-210ENST00000473565 TMEM169Q96HH4 297 aa6.4□□□□□ -1.39
CLK1-210ENST00000473565 TTC25Q96NG3 672 aa6.4□□□□□ -1.39
CLK1-210ENST00000473565 SERPINB11Q96P15 392 aa6.4□□□□□ -1.39
CLK1-210ENST00000473565 ROPN1BQ9BZX4 212 aaPredicted RBP6.4□□□□□ -1.39
CLK1-210ENST00000473565 SLC39A8Q9C0K1 460 aa6.4□□□□□ -1.39
CLK1-210ENST00000473565 OSBPL2Q9H1P3 480 aa6.4□□□□□ -1.39
CLK1-210ENST00000473565 ROPN1Q9HAT0 212 aaPredicted RBP6.4□□□□□ -1.39
CLK1-210ENST00000473565 UGT1A7Q9HAW7 530 aa6.4□□□□□ -1.39
CLK1-210ENST00000473565 UGT1A10Q9HAW8 530 aa6.4□□□□□ -1.39
CLK1-210ENST00000473565 UGT1A8Q9HAW9 530 aa6.4□□□□□ -1.39
CLK1-210ENST00000473565 KCNK9Q9NPC2 374 aa6.4□□□□□ -1.39
CLK1-210ENST00000473565 EURLQ9NYK6 297 aa6.4□□□□□ -1.39
CLK1-210ENST00000473565 MARCH2Q9P0N8 246 aa6.4□□□□□ -1.39
CLK1-210ENST00000473565 UNC80Q8N2C7 3258 aa6.4□□□□□ -1.39
CLK1-210ENST00000473565 CCDC78A2IDD5 438 aa6.39□□□□□ -1.39
CLK1-210ENST00000473565 CXorf49A8MYA2 514 aaPredicted RBP6.39□□□□□ -1.39
CLK1-210ENST00000473565 HACD1B0YJ81 288 aa6.39□□□□□ -1.39
CLK1-210ENST00000473565 GOLGA8RI6L899 631 aa6.39□□□□□ -1.39
CLK1-210ENST00000473565 TRDMT1O14717 391 aaKnown RBP6.39□□□□□ -1.39
CLK1-210ENST00000473565 TLR5O60602 858 aa6.39□□□□□ -1.39
CLK1-210ENST00000473565 EFEMP2O95967 443 aa6.39□□□□□ -1.39
CLK1-210ENST00000473565 ABHD2P08910 425 aa6.39□□□□□ -1.39
CLK1-210ENST00000473565 NFKB1P19838 968 aa6.39□□□□□ -1.39
CLK1-210ENST00000473565 CD68P34810 354 aaPredicted RBP6.39□□□□□ -1.39
CLK1-210ENST00000473565 GARSP41250 739 aaKnown RBP6.39□□□□□ -1.39
CLK1-210ENST00000473565 MMP13P45452 471 aa6.39□□□□□ -1.39
CLK1-210ENST00000473565 GLUD2P49448 558 aa6.39□□□□□ -1.39
CLK1-210ENST00000473565 GALNT2Q10471 571 aa6.39□□□□□ -1.39
CLK1-210ENST00000473565 KBTBD12Q3ZCT8 623 aa6.39□□□□□ -1.39
CLK1-210ENST00000473565 C1orf53Q5VUE5 145 aa6.39□□□□□ -1.39
CLK1-210ENST00000473565 CASC4Q6P4E1 433 aa6.39□□□□□ -1.39
CLK1-210ENST00000473565 MICALCLQ6ZW33 695 aa6.39□□□□□ -1.39
CLK1-210ENST00000473565 C16orf59Q7L2K0 433 aa6.39□□□□□ -1.39
CLK1-210ENST00000473565 SLC39A11Q8N1S5 342 aa6.39□□□□□ -1.39
CLK1-210ENST00000473565 BCAS4Q8TDM0 211 aa6.39□□□□□ -1.39
CLK1-210ENST00000473565 IGSF8Q969P0 613 aa6.39□□□□□ -1.39
CLK1-210ENST00000473565 SLC39A13Q96H72 371 aa6.39□□□□□ -1.39
CLK1-210ENST00000473565 ZNF558Q96NG5 402 aa6.39□□□□□ -1.39
CLK1-210ENST00000473565 PAFAH2Q99487 392 aa6.39□□□□□ -1.39
CLK1-210ENST00000473565 C12orf65Q9H3J6 166 aaKnown RBP6.39□□□□□ -1.39
CLK1-210ENST00000473565 RC3H2Q9HBD1 1191 aaKnown RBP6.39□□□□□ -1.39
CLK1-210ENST00000473565 CXXC1Q9P0U4 656 aaPredicted RBP6.39□□□□□ -1.39
CLK1-210ENST00000473565 ZC3H7BQ9UGR2 993 aaKnown RBP6.39□□□□□ -1.39
CLK1-210ENST00000473565 LTBP2Q14767 1821 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms