RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 KCNU1A8MYU2 1149 aa10.52□□□□□ -0.73
SF3A3-204ENST00000462258 EPHB6O15197 1021 aa10.52□□□□□ -0.73
SF3A3-204ENST00000462258 NDUFS2O75306 463 aa10.52□□□□□ -0.73
SF3A3-204ENST00000462258 GFPT2O94808 682 aa10.52□□□□□ -0.73
SF3A3-204ENST00000462258 ASLP04424 464 aa10.52□□□□□ -0.73
SF3A3-204ENST00000462258 MMEP08473 750 aa10.52□□□□□ -0.73
SF3A3-204ENST00000462258 ACADMP11310 421 aa10.52□□□□□ -0.73
SF3A3-204ENST00000462258 CD6P30203 668 aa10.52□□□□□ -0.73
SF3A3-204ENST00000462258 NOS2P35228 1153 aa10.52□□□□□ -0.73
SF3A3-204ENST00000462258 CSKP41240 450 aa10.52□□□□□ -0.73
SF3A3-204ENST00000462258 SULT1E1P49888 294 aa10.52□□□□□ -0.73
SF3A3-204ENST00000462258 POLR2FP61218 127 aaKnown RBP10.52□□□□□ -0.73
SF3A3-204ENST00000462258 NOMO3P69849 1222 aa10.52□□□□□ -0.73
SF3A3-204ENST00000462258 TYRO3Q06418 890 aa10.52□□□□□ -0.73
SF3A3-204ENST00000462258 ZNF33AQ06730 810 aa10.52□□□□□ -0.73
SF3A3-204ENST00000462258 NME3Q13232 169 aa10.52□□□□□ -0.73
SF3A3-204ENST00000462258 CAMK2GQ13555 558 aaPredicted RBP10.52□□□□□ -0.73
SF3A3-204ENST00000462258 FSCBQ5H9T9 825 aa10.52□□□□□ -0.73
SF3A3-204ENST00000462258 PPM1JQ5JR12 505 aa10.52□□□□□ -0.73
SF3A3-204ENST00000462258 PITRM1Q5JRX3 1037 aa10.52□□□□□ -0.73
SF3A3-204ENST00000462258 RABGAP1LQ5R372 815 aa10.52□□□□□ -0.73
SF3A3-204ENST00000462258 TTC39BQ5VTQ0 682 aaPredicted RBP10.52□□□□□ -0.73
SF3A3-204ENST00000462258 MMS22LQ6ZRQ5 1243 aa10.52□□□□□ -0.73
SF3A3-204ENST00000462258 METTL3Q86U44 580 aaKnown RBP10.52□□□□□ -0.73
SF3A3-204ENST00000462258 CIR1Q86X95 450 aaPredicted RBP10.52□□□□□ -0.73
SF3A3-204ENST00000462258 ZNF677Q86XU0 584 aa10.52□□□□□ -0.73
SF3A3-204ENST00000462258 TMPRSS6Q8IU80 811 aa10.52□□□□□ -0.73
SF3A3-204ENST00000462258 SLC41A1Q8IVJ1 513 aa10.52□□□□□ -0.73
SF3A3-204ENST00000462258 AOPEPQ8N6M6 819 aa10.52□□□□□ -0.73
SF3A3-204ENST00000462258 SLC20A1Q8WUM9 679 aa10.52□□□□□ -0.73
SF3A3-204ENST00000462258 LMLNQ96KR4 655 aa10.52□□□□□ -0.73
SF3A3-204ENST00000462258 SPAG5Q96R06 1193 aa10.52□□□□□ -0.73
SF3A3-204ENST00000462258 PRMT1Q99873 361 aaKnown RBP10.52□□□□□ -0.73
SF3A3-204ENST00000462258 NLRC4Q9NPP4 1024 aa10.52□□□□□ -0.73
SF3A3-204ENST00000462258 TMEM74BQ9NUR3 256 aa10.52□□□□□ -0.73
SF3A3-204ENST00000462258 TMEM63CQ9P1W3 806 aa10.52□□□□□ -0.73
SF3A3-204ENST00000462258 LIMA1Q9UHB6 759 aaKnown RBP10.52□□□□□ -0.73
SF3A3-204ENST00000462258 SLC12A6Q9UHW9 1150 aa10.52□□□□□ -0.73
SF3A3-204ENST00000462258 PILRBQ9UKJ0 227 aa10.52□□□□□ -0.73
SF3A3-204ENST00000462258 STAP1Q9ULZ2 295 aa10.52□□□□□ -0.73
SF3A3-204ENST00000462258 SIK3Q9Y2K2 1263 aa10.52□□□□□ -0.73
SF3A3-204ENST00000462258 DAAM1Q9Y4D1 1078 aa10.52□□□□□ -0.73
SF3A3-204ENST00000462258 A0A1B0GVM2 712 aa10.51□□□□□ -0.73
SF3A3-204ENST00000462258 TCAF2A6NFQ2 919 aa10.51□□□□□ -0.73
SF3A3-204ENST00000462258 MEI4A8MW99 385 aa10.51□□□□□ -0.73
SF3A3-204ENST00000462258 H0Y626 953 aa10.51□□□□□ -0.73
SF3A3-204ENST00000462258 M0QYT0 321 aa10.51□□□□□ -0.73
SF3A3-204ENST00000462258 MOCS3O95396 460 aa10.51□□□□□ -0.73
SF3A3-204ENST00000462258 IGLV3-19P01714 112 aa10.51□□□□□ -0.73
SF3A3-204ENST00000462258 CFIP05156 583 aa10.51□□□□□ -0.73
SF3A3-204ENST00000462258 ZNF18P17022 549 aa10.51□□□□□ -0.73
SF3A3-204ENST00000462258 SOX5P35711 763 aa10.51□□□□□ -0.73
SF3A3-204ENST00000462258 SCNN1AP37088 669 aa10.51□□□□□ -0.73
SF3A3-204ENST00000462258 GGCXP38435 758 aa10.51□□□□□ -0.73
SF3A3-204ENST00000462258 MATKP42679 507 aa10.51□□□□□ -0.73
SF3A3-204ENST00000462258 GABRB2P47870 512 aa10.51□□□□□ -0.73
SF3A3-204ENST00000462258 TPMTP51580 245 aa10.51□□□□□ -0.73
SF3A3-204ENST00000462258 JAM2P57087 298 aa10.51□□□□□ -0.73
SF3A3-204ENST00000462258 ST8SIA6P61647 398 aa10.51□□□□□ -0.73
SF3A3-204ENST00000462258 CENPCQ03188 943 aa10.51□□□□□ -0.73
SF3A3-204ENST00000462258 MTA1Q13330 715 aa10.51□□□□□ -0.73
SF3A3-204ENST00000462258 SYCP1Q15431 976 aa10.51□□□□□ -0.73
SF3A3-204ENST00000462258 C2CD6Q53TS8 623 aa10.51□□□□□ -0.73
SF3A3-204ENST00000462258 NAA35Q5VZE5 725 aa10.51□□□□□ -0.73
SF3A3-204ENST00000462258 RABEPKQ7Z6M1 372 aa10.51□□□□□ -0.73
SF3A3-204ENST00000462258 ERICH1Q86X53 443 aa10.51□□□□□ -0.73
SF3A3-204ENST00000462258 XYLT1Q86Y38 959 aa10.51□□□□□ -0.73
SF3A3-204ENST00000462258 CCAR2Q8N163 923 aaKnown RBP10.51□□□□□ -0.73
SF3A3-204ENST00000462258 FOXJ1Q92949 421 aa10.51□□□□□ -0.73
SF3A3-204ENST00000462258 TTC17Q96AE7 1141 aa10.51□□□□□ -0.73
SF3A3-204ENST00000462258 C18orf8Q96DM3 657 aa10.51□□□□□ -0.73
SF3A3-204ENST00000462258 TOE1Q96GM8 510 aaKnown RBP10.51□□□□□ -0.73
SF3A3-204ENST00000462258 MYO19Q96H55 970 aa10.51□□□□□ -0.73
SF3A3-204ENST00000462258 PCMTD1Q96MG8 357 aaPredicted RBP10.51□□□□□ -0.73
SF3A3-204ENST00000462258 RPRD1AQ96P16 312 aaPredicted RBP10.51□□□□□ -0.73
SF3A3-204ENST00000462258 NUSAP1Q9BXS6 441 aaKnown RBP10.51□□□□□ -0.73
SF3A3-204ENST00000462258 ADAM33Q9BZ11 813 aa10.51□□□□□ -0.73
SF3A3-204ENST00000462258 FBRSQ9HAH7 460 aa10.51□□□□□ -0.73
SF3A3-204ENST00000462258 TMEM9BQ9NQ34 198 aa10.51□□□□□ -0.73
SF3A3-204ENST00000462258 PIGVQ9NUD9 493 aa10.51□□□□□ -0.73
SF3A3-204ENST00000462258 RRN3Q9NYV6 651 aa10.51□□□□□ -0.73
SF3A3-204ENST00000462258 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.51□□□□□ -0.73
SF3A3-204ENST00000462258 KIAA1522Q9P206 1035 aaPredicted RBP10.51□□□□□ -0.73
SF3A3-204ENST00000462258 NOCTQ9UK39 431 aaKnown RBP10.51□□□□□ -0.73
SF3A3-204ENST00000462258 INTS6Q9UL03 887 aaKnown RBP10.51□□□□□ -0.73
SF3A3-204ENST00000462258 DOCK4Q8N1I0 1966 aa10.5□□□□□ -0.73
SF3A3-204ENST00000462258 CNOT1A5YKK6 2376 aaKnown RBP10.5□□□□□ -0.73
SF3A3-204ENST00000462258 C4orf47A7E2U8 309 aa10.5□□□□□ -0.73
SF3A3-204ENST00000462258 GOLGA8SH3BPF8 625 aa10.5□□□□□ -0.73
SF3A3-204ENST00000462258 PAGE1O75459 146 aa10.5□□□□□ -0.73
SF3A3-204ENST00000462258 ENGP17813 658 aa10.5□□□□□ -0.73
SF3A3-204ENST00000462258 CDK11BP21127 795 aaKnown RBP10.5□□□□□ -0.73
SF3A3-204ENST00000462258 OXTRP30559 389 aa10.5□□□□□ -0.73
SF3A3-204ENST00000462258 FLT3P36888 993 aa10.5□□□□□ -0.73
SF3A3-204ENST00000462258 RNASE9P60153 205 aaKnown RBP10.5□□□□□ -0.73
SF3A3-204ENST00000462258 IRX4P78413 519 aa10.5□□□□□ -0.73
SF3A3-204ENST00000462258 FMO1Q01740 532 aa10.5□□□□□ -0.73
SF3A3-204ENST00000462258 CDR2Q01850 454 aa10.5□□□□□ -0.73
SF3A3-204ENST00000462258 UBXN1Q04323 297 aa10.5□□□□□ -0.73
SF3A3-204ENST00000462258 NCAPHQ15003 741 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms