RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	ZDHHC17	Q8IUH5	632 aa		13.18	□□□□□ -0.3
FDPS-204	ENST00000461507	UNC45B	Q8IWX7	931 aa		13.18	□□□□□ -0.3
FDPS-204	ENST00000461507	PGBD3	Q8N328	593 aa		13.18	□□□□□ -0.3
FDPS-204	ENST00000461507	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	13.18	□□□□□ -0.3
FDPS-204	ENST00000461507	CAPN10	Q9HC96	672 aa		13.18	□□□□□ -0.3
FDPS-204	ENST00000461507	METTL5	Q9NRN9	209 aa	Known RBP	13.18	□□□□□ -0.3
FDPS-204	ENST00000461507	CLEC4E	Q9ULY5	219 aa		13.18	□□□□□ -0.3
FDPS-204	ENST00000461507	STAP1	Q9ULZ2	295 aa		13.18	□□□□□ -0.3
FDPS-204	ENST00000461507	RAD54B	Q9Y620	910 aa		13.18	□□□□□ -0.3
FDPS-204	ENST00000461507	STON1	Q9Y6Q2	735 aa		13.18	□□□□□ -0.3
FDPS-204	ENST00000461507	TYW5	A2RUC4	315 aa	Known RBP	13.17	□□□□□ -0.3
FDPS-204	ENST00000461507	PCNX2	A6NKB5	2137 aa		13.17	□□□□□ -0.3
FDPS-204	ENST00000461507	IGLV3-19	P01714	112 aa		13.17	□□□□□ -0.3
FDPS-204	ENST00000461507	FYN	P06241	537 aa		13.17	□□□□□ -0.3
FDPS-204	ENST00000461507	GLI1	P08151	1106 aa		13.17	□□□□□ -0.3
FDPS-204	ENST00000461507	TPM1	P09493	284 aa		13.17	□□□□□ -0.3
FDPS-204	ENST00000461507	ITPKA	P23677	461 aa		13.17	□□□□□ -0.3
FDPS-204	ENST00000461507	CDH5	P33151	784 aa	Predicted RBP	13.17	□□□□□ -0.3
FDPS-204	ENST00000461507	IL12RB1	P42701	662 aa		13.17	□□□□□ -0.3
FDPS-204	ENST00000461507	PITX1	P78337	314 aa	Predicted RBP	13.17	□□□□□ -0.3
FDPS-204	ENST00000461507	RPL6	Q02878	288 aa	Known RBP	13.17	□□□□□ -0.3
FDPS-204	ENST00000461507	CLEC16A	Q2KHT3	1053 aa		13.17	□□□□□ -0.3
FDPS-204	ENST00000461507	ZC3H12A	Q5D1E8	599 aa	Known RBP	13.17	□□□□□ -0.3
FDPS-204	ENST00000461507	SND1	Q7KZF4	910 aa	Known RBP eCLIP	13.17	□□□□□ -0.3	2e-8	■■□□□ 12.9
FDPS-204	ENST00000461507	SLC26A9	Q7LBE3	791 aa		13.17	□□□□□ -0.3
FDPS-204	ENST00000461507	CHSY1	Q86X52	802 aa		13.17	□□□□□ -0.3
FDPS-204	ENST00000461507	XYLT1	Q86Y38	959 aa		13.17	□□□□□ -0.3
FDPS-204	ENST00000461507	SLC41A1	Q8IVJ1	513 aa		13.17	□□□□□ -0.3
FDPS-204	ENST00000461507	CEP76	Q8TAP6	659 aa		13.17	□□□□□ -0.3
FDPS-204	ENST00000461507	UCMA	Q8WVF2	138 aa		13.17	□□□□□ -0.3
FDPS-204	ENST00000461507	BAP1	Q92560	729 aa		13.17	□□□□□ -0.3
FDPS-204	ENST00000461507	PCDHB18P	Q96TA0	734 aa		13.17	□□□□□ -0.3
FDPS-204	ENST00000461507	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	13.17	□□□□□ -0.3
FDPS-204	ENST00000461507	ASNSD1	Q9NWL6	643 aa		13.17	□□□□□ -0.3
FDPS-204	ENST00000461507	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	13.17	□□□□□ -0.3	6e-8	■■■□□ 15.1
FDPS-204	ENST00000461507	ADAM22	Q9P0K1	906 aa		13.17	□□□□□ -0.3
FDPS-204	ENST00000461507	STIM2	Q9P246	746 aa		13.17	□□□□□ -0.3
FDPS-204	ENST00000461507	USP36	Q9P275	1121 aa	Known RBP	13.17	□□□□□ -0.3
FDPS-204	ENST00000461507	SLC12A6	Q9UHW9	1150 aa		13.17	□□□□□ -0.3
FDPS-204	ENST00000461507	ANGPTL2	Q9UKU9	493 aa		13.17	□□□□□ -0.3
FDPS-204	ENST00000461507	MYO6	Q9UM54	1294 aa		13.17	□□□□□ -0.3
FDPS-204	ENST00000461507	TLR6	Q9Y2C9	796 aa		13.17	□□□□□ -0.3
FDPS-204	ENST00000461507	ATXN2	Q99700	1313 aa	Known RBP	13.16	□□□□□ -0.3
FDPS-204	ENST00000461507	GOLGA6L7	A0A1B0GV03	622 aa		13.16	□□□□□ -0.3
FDPS-204	ENST00000461507	UPK3BL1	B0FP48	263 aa		13.16	□□□□□ -0.3
FDPS-204	ENST00000461507	WASH3P	C4AMC7	463 aa		13.16	□□□□□ -0.3
FDPS-204	ENST00000461507	UPK3BL2	E5RIL1	263 aa		13.16	□□□□□ -0.3
FDPS-204	ENST00000461507		M0QYT0	321 aa		13.16	□□□□□ -0.3
FDPS-204	ENST00000461507	ZBTB24	O43167	697 aa	Predicted RBP	13.16	□□□□□ -0.3
FDPS-204	ENST00000461507	IRAK2	O43187	625 aa		13.16	□□□□□ -0.3
FDPS-204	ENST00000461507	ACSL4	O60488	711 aa		13.16	□□□□□ -0.3
FDPS-204	ENST00000461507	CYP1A1	P04798	512 aa	Predicted RBP	13.16	□□□□□ -0.3
FDPS-204	ENST00000461507	CALB1	P05937	261 aa		13.16	□□□□□ -0.3
FDPS-204	ENST00000461507	SERPINF2	P08697	491 aa		13.16	□□□□□ -0.3
FDPS-204	ENST00000461507	SKIL	P12757	684 aa		13.16	□□□□□ -0.3
FDPS-204	ENST00000461507	ENG	P17813	658 aa		13.16	□□□□□ -0.3
FDPS-204	ENST00000461507	ABCB4	P21439	1286 aa		13.16	□□□□□ -0.3
FDPS-204	ENST00000461507	NOS2	P35228	1153 aa		13.16	□□□□□ -0.3
FDPS-204	ENST00000461507	NOVA1	P51513	510 aa	Known RBP	13.16	□□□□□ -0.3
FDPS-204	ENST00000461507	RING1	Q06587	406 aa		13.16	□□□□□ -0.3
FDPS-204	ENST00000461507	ZNF33A	Q06730	810 aa		13.16	□□□□□ -0.3
FDPS-204	ENST00000461507	STARD3	Q14849	445 aa		13.16	□□□□□ -0.3
FDPS-204	ENST00000461507	DUOXA1	Q1HG43	343 aa		13.16	□□□□□ -0.3
FDPS-204	ENST00000461507	FUT11	Q495W5	492 aa		13.16	□□□□□ -0.3
FDPS-204	ENST00000461507	MPPE1	Q53F39	396 aa		13.16	□□□□□ -0.3
FDPS-204	ENST00000461507	TMEM215	Q68D42	235 aa		13.16	□□□□□ -0.3
FDPS-204	ENST00000461507	PSAPL1	Q6NUJ1	521 aa		13.16	□□□□□ -0.3
FDPS-204	ENST00000461507	DNAJC24	Q6P3W2	148 aa		13.16	□□□□□ -0.3
FDPS-204	ENST00000461507	RFWD3	Q6PCD5	774 aa		13.16	□□□□□ -0.3
FDPS-204	ENST00000461507	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	13.16	□□□□□ -0.3
FDPS-204	ENST00000461507	CCDC117	Q8IWD4	279 aa	Predicted RBP	13.16	□□□□□ -0.3
FDPS-204	ENST00000461507	ATP6V0D2	Q8N8Y2	350 aa		13.16	□□□□□ -0.3
FDPS-204	ENST00000461507	ZNF419	Q96HQ0	510 aa	Predicted RBP	13.16	□□□□□ -0.3
FDPS-204	ENST00000461507	SLC2A13	Q96QE2	648 aa		13.16	□□□□□ -0.3
FDPS-204	ENST00000461507	DDX50	Q9BQ39	737 aa	Known RBP	13.16	□□□□□ -0.3
FDPS-204	ENST00000461507	SELENOO	Q9BVL4	669 aa		13.16	□□□□□ -0.3
FDPS-204	ENST00000461507	NUSAP1	Q9BXS6	441 aa	Known RBP	13.16	□□□□□ -0.3
FDPS-204	ENST00000461507	TRIM5	Q9C035	493 aa		13.16	□□□□□ -0.3
FDPS-204	ENST00000461507	SLC6A17	Q9H1V8	727 aa		13.16	□□□□□ -0.3
FDPS-204	ENST00000461507	HAUS4	Q9H6D7	363 aa		13.16	□□□□□ -0.3
FDPS-204	ENST00000461507	CD93	Q9NPY3	652 aa		13.16	□□□□□ -0.3
FDPS-204	ENST00000461507	ELOVL2	Q9NXB9	296 aa		13.16	□□□□□ -0.3
FDPS-204	ENST00000461507	SLC6A14	Q9UN76	642 aa		13.16	□□□□□ -0.3
FDPS-204	ENST00000461507	CYP8B1	Q9UNU6	501 aa		13.16	□□□□□ -0.3
FDPS-204	ENST00000461507	LUC7L2	Q9Y383	392 aa	Known RBP	13.16	□□□□□ -0.3
FDPS-204	ENST00000461507	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	13.16	□□□□□ -0.3	8e-10	■□□□□ 9.3
FDPS-204	ENST00000461507	NYNRIN	Q9P2P1	1898 aa	Known RBP	13.16	□□□□□ -0.3
FDPS-204	ENST00000461507	ANKRD62	A6NC57	917 aa		13.15	□□□□□ -0.3
FDPS-204	ENST00000461507	TIMM44	O43615	452 aa		13.15	□□□□□ -0.3
FDPS-204	ENST00000461507	TBL1X	O60907	577 aa		13.15	□□□□□ -0.3
FDPS-204	ENST00000461507	GJB6	O95452	261 aa		13.15	□□□□□ -0.3
FDPS-204	ENST00000461507	CEACAM1	P13688	526 aa		13.15	□□□□□ -0.3
FDPS-204	ENST00000461507	HLA-F	P30511	346 aa		13.15	□□□□□ -0.3
FDPS-204	ENST00000461507	MATK	P42679	507 aa		13.15	□□□□□ -0.3
FDPS-204	ENST00000461507	CENPC	Q03188	943 aa		13.15	□□□□□ -0.3
FDPS-204	ENST00000461507	DEUP1	Q05D60	604 aa		13.15	□□□□□ -0.3
FDPS-204	ENST00000461507	NNT	Q13423	1086 aa		13.15	□□□□□ -0.3
FDPS-204	ENST00000461507	ZNF234	Q14588	700 aa		13.15	□□□□□ -0.3
FDPS-204	ENST00000461507	CDO1	Q16878	200 aa		13.15	□□□□□ -0.3
FDPS-204	ENST00000461507	MPP7	Q5T2T1	576 aa		13.15	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms