RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 FAM204AQ9H8W3 233 aa20.07■□□□□ 0.8
USP40-207ENST00000450940 CAPN10Q9HC96 672 aa20.07■□□□□ 0.8
USP40-207ENST00000450940 PRSS16Q9NQE7 514 aa20.07■□□□□ 0.8
USP40-207ENST00000450940 DDIT4Q9NX09 232 aa20.07■□□□□ 0.8
USP40-207ENST00000450940 SUN2Q9UH99 717 aa20.07■□□□□ 0.8
USP40-207ENST00000450940 SLC12A6Q9UHW9 1150 aa20.07■□□□□ 0.8
USP40-207ENST00000450940 SLC6A14Q9UN76 642 aa20.07■□□□□ 0.8
USP40-207ENST00000450940 ASCC3Q8N3C0 2202 aaKnown RBP20.06■□□□□ 0.8
USP40-207ENST00000450940 F8VZ95 297 aa20.06■□□□□ 0.8
USP40-207ENST00000450940 GOLGA6L22H0YM25 854 aa20.06■□□□□ 0.8
USP40-207ENST00000450940 DAB1O75553 588 aa20.06■□□□□ 0.8
USP40-207ENST00000450940 GRAP2O75791 330 aa20.06■□□□□ 0.8
USP40-207ENST00000450940 SERPINF2P08697 491 aa20.06■□□□□ 0.8
USP40-207ENST00000450940 MTA1Q13330 715 aa20.06■□□□□ 0.8
USP40-207ENST00000450940 DAB2IPQ5VWQ8 1189 aa20.06■□□□□ 0.8
USP40-207ENST00000450940 CHSY1Q86X52 802 aa20.06■□□□□ 0.8
USP40-207ENST00000450940 CARNMT1Q8N4J0 409 aa20.06■□□□□ 0.8
USP40-207ENST00000450940 DNASE2BQ8WZ79 361 aa20.06■□□□□ 0.8
USP40-207ENST00000450940 NT5C3BQ969T7 300 aa20.06■□□□□ 0.8
USP40-207ENST00000450940 MRGPRX3Q96LB0 322 aa20.06■□□□□ 0.8
USP40-207ENST00000450940 VPS16Q9H269 839 aa20.06■□□□□ 0.8
USP40-207ENST00000450940 ANO10Q9NW15 660 aa20.06■□□□□ 0.8
USP40-207ENST00000450940 FANCLQ9NW38 375 aa20.06■□□□□ 0.8
USP40-207ENST00000450940 RRN3Q9NYV6 651 aa20.06■□□□□ 0.8
USP40-207ENST00000450940 KIAA1522Q9P206 1035 aaPredicted RBP20.06■□□□□ 0.8
USP40-207ENST00000450940 ATXN2Q99700 1313 aaKnown RBP20.05■□□□□ 0.8
USP40-207ENST00000450940 LSM8O95777 96 aaKnown RBP20.05■□□□□ 0.8
USP40-207ENST00000450940 ABCB4P21439 1286 aa20.05■□□□□ 0.8
USP40-207ENST00000450940 CSKP41240 450 aa20.05■□□□□ 0.8
USP40-207ENST00000450940 MATKP42679 507 aa20.05■□□□□ 0.8
USP40-207ENST00000450940 ZBTB16Q05516 673 aa20.05■□□□□ 0.8
USP40-207ENST00000450940 CDH18Q13634 790 aa20.05■□□□□ 0.8
USP40-207ENST00000450940 PITRM1Q5JRX3 1037 aa20.05■□□□□ 0.8
USP40-207ENST00000450940 SASS6Q6UVJ0 657 aa20.05■□□□□ 0.8
USP40-207ENST00000450940 NOP9Q86U38 636 aaKnown RBP20.05■□□□□ 0.8
USP40-207ENST00000450940 CCDC117Q8IWD4 279 aaPredicted RBP20.05■□□□□ 0.8
USP40-207ENST00000450940 NPY6RQ99463 290 aa20.05■□□□□ 0.8
USP40-207ENST00000450940 NUP58Q9BVL2 599 aa20.05■□□□□ 0.8
USP40-207ENST00000450940 SYNCQ9H7C4 482 aa20.05■□□□□ 0.8
USP40-207ENST00000450940 DAAM1Q9Y4D1 1078 aa20.05■□□□□ 0.8
USP40-207ENST00000450940 LRRC10BA6NIK2 292 aa20.04■□□□□ 0.8
USP40-207ENST00000450940 F5H5T6 163 aa20.04■□□□□ 0.8
USP40-207ENST00000450940 H0Y626 953 aa20.04■□□□□ 0.8
USP40-207ENST00000450940 ACADMP11310 421 aa20.04■□□□□ 0.8
USP40-207ENST00000450940 ENGP17813 658 aa20.04■□□□□ 0.8
USP40-207ENST00000450940 PLK1P53350 603 aa20.04■□□□□ 0.8
USP40-207ENST00000450940 SLC12A1Q13621 1099 aa20.04■□□□□ 0.8
USP40-207ENST00000450940 WDR45BQ5MNZ6 344 aa20.04■□□□□ 0.8
USP40-207ENST00000450940 SYCP2LQ5T4T6 812 aa20.04■□□□□ 0.8
USP40-207ENST00000450940 TTC39BQ5VTQ0 682 aaPredicted RBP20.04■□□□□ 0.8
USP40-207ENST00000450940 OTUD1Q5VV17 481 aaPredicted RBP20.04■□□□□ 0.8
USP40-207ENST00000450940 MMS22LQ6ZRQ5 1243 aa20.04■□□□□ 0.8
USP40-207ENST00000450940 ZNF366Q8N895 744 aa20.04■□□□□ 0.8
USP40-207ENST00000450940 EPS8L1Q8TE68 723 aa20.04■□□□□ 0.8
USP40-207ENST00000450940 C18orf8Q96DM3 657 aa20.04■□□□□ 0.8
USP40-207ENST00000450940 PGAP3Q96FM1 320 aaPredicted RBP20.04■□□□□ 0.8
USP40-207ENST00000450940 GPR174Q9BXC1 333 aa20.04■□□□□ 0.8
USP40-207ENST00000450940 PCED1AQ9H1Q7 454 aa20.04■□□□□ 0.8
USP40-207ENST00000450940 PDCL3Q9H2J4 239 aa20.04■□□□□ 0.8
USP40-207ENST00000450940 TMEM51Q9NW97 253 aa20.04■□□□□ 0.8
USP40-207ENST00000450940 LIMA1Q9UHB6 759 aaKnown RBP20.04■□□□□ 0.8
USP40-207ENST00000450940 NUMA1Q14980 2115 aa20.03■□□□□ 0.8
USP40-207ENST00000450940 METTL12A8MUP2 240 aa20.03■□□□□ 0.8
USP40-207ENST00000450940 KCNK5O95279 499 aa20.03■□□□□ 0.8
USP40-207ENST00000450940 MBD3O95983 291 aa20.03■□□□□ 0.8
USP40-207ENST00000450940 SRPRAP08240 638 aaKnown RBP20.03■□□□□ 0.8
USP40-207ENST00000450940 CXCR3P49682 368 aa20.03■□□□□ 0.8
USP40-207ENST00000450940 JAM2P57087 298 aa20.03■□□□□ 0.8
USP40-207ENST00000450940 RPS14P62263 151 aaKnown RBP20.03■□□□□ 0.8
USP40-207ENST00000450940 STX1AQ16623 288 aa20.03■□□□□ 0.8
USP40-207ENST00000450940 HNRNPA1L2Q32P51 320 aaKnown RBP20.03■□□□□ 0.8
USP40-207ENST00000450940 PLEKHG6Q3KR16 790 aa20.03■□□□□ 0.8
USP40-207ENST00000450940 C5orf22Q49AR2 442 aa20.03■□□□□ 0.8
USP40-207ENST00000450940 FBXL22Q6P050 247 aa20.03■□□□□ 0.8
USP40-207ENST00000450940 ERICH1Q86X53 443 aa20.03■□□□□ 0.8
USP40-207ENST00000450940 ZNF677Q86XU0 584 aa20.03■□□□□ 0.8
USP40-207ENST00000450940 XYLT1Q86Y38 959 aa20.03■□□□□ 0.8
USP40-207ENST00000450940 CCAR2Q8N163 923 aaKnown RBP20.03■□□□□ 0.8
USP40-207ENST00000450940 ADAM33Q9BZ11 813 aa20.03■□□□□ 0.8
USP40-207ENST00000450940 RSPH9Q9H1X1 276 aaPredicted RBP20.03■□□□□ 0.8
USP40-207ENST00000450940 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.03■□□□□ 0.8
USP40-207ENST00000450940 SUSD2Q9UGT4 822 aa20.03■□□□□ 0.8
USP40-207ENST00000450940 NOCTQ9UK39 431 aaKnown RBP20.03■□□□□ 0.8
USP40-207ENST00000450940 ERVW-1Q9UQF0 538 aa20.03■□□□□ 0.8
USP40-207ENST00000450940 SIK3Q9Y2K2 1263 aa20.03■□□□□ 0.8
USP40-207ENST00000450940 NYNRINQ9P2P1 1898 aaKnown RBP20.03■□□□□ 0.8
USP40-207ENST00000450940 ITIH6Q6UXX5 1313 aa20.02■□□□□ 0.8
USP40-207ENST00000450940 A0A1B0GVM2 712 aa20.02■□□□□ 0.8
USP40-207ENST00000450940 TCAF2A6NFQ2 919 aa20.02■□□□□ 0.8
USP40-207ENST00000450940 M0QYT0 321 aa20.02■□□□□ 0.8
USP40-207ENST00000450940 MOCS3O95396 460 aa20.02■□□□□ 0.8
USP40-207ENST00000450940 CFIP05156 583 aa20.02■□□□□ 0.8
USP40-207ENST00000450940 TPM2P07951 284 aa20.02■□□□□ 0.8
USP40-207ENST00000450940 ZNF18P17022 549 aa20.02■□□□□ 0.8
USP40-207ENST00000450940 CSRP1P21291 193 aaKnown RBP20.02■□□□□ 0.8
USP40-207ENST00000450940 KLK7P49862 253 aa20.02■□□□□ 0.8
USP40-207ENST00000450940 ST8SIA6P61647 398 aa20.02■□□□□ 0.8
USP40-207ENST00000450940 MYL5Q02045 173 aa20.02■□□□□ 0.8
USP40-207ENST00000450940 GFPT1Q06210 699 aaPredicted RBP20.02■□□□□ 0.8
USP40-207ENST00000450940 AUHQ13825 339 aaKnown RBP20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 252.7 ms