RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 MTG2Q9H4K7 406 aa21.79■■□□□ 1.08
VSX1-206ENST00000444511 APEX2Q9UBZ4 518 aa21.79■■□□□ 1.08
VSX1-206ENST00000444511 XPO7Q9UIA9 1087 aaKnown RBP21.79■■□□□ 1.08
VSX1-206ENST00000444511 INTS6Q9UL03 887 aaKnown RBP21.79■■□□□ 1.08
VSX1-206ENST00000444511 LUC7L3O95232 432 aaKnown RBP21.78■■□□□ 1.08
VSX1-206ENST00000444511 MOCS3O95396 460 aa21.78■■□□□ 1.08
VSX1-206ENST00000444511 CER1O95813 267 aa21.78■■□□□ 1.08
VSX1-206ENST00000444511 TRUB2O95900 331 aaKnown RBP21.78■■□□□ 1.08
VSX1-206ENST00000444511 MATKP42679 507 aa21.78■■□□□ 1.08
VSX1-206ENST00000444511 TRIP6Q15654 476 aaKnown RBP21.78■■□□□ 1.08
VSX1-206ENST00000444511 EXOC3L4Q17RC7 722 aa21.78■■□□□ 1.08
VSX1-206ENST00000444511 FSCBQ5H9T9 825 aa21.78■■□□□ 1.08
VSX1-206ENST00000444511 RAP1GAP2Q684P5 730 aa21.78■■□□□ 1.08
VSX1-206ENST00000444511 MMS22LQ6ZRQ5 1243 aa21.78■■□□□ 1.08
VSX1-206ENST00000444511 BTN2A3PQ96KV6 586 aa21.78■■□□□ 1.08
VSX1-206ENST00000444511 GAREM1Q9H706 876 aa21.78■■□□□ 1.08
VSX1-206ENST00000444511 NCKAP1Q9Y2A7 1128 aa21.78■■□□□ 1.08
VSX1-206ENST00000444511 ZBTB32Q9Y2Y4 487 aaPredicted RBP21.78■■□□□ 1.08
VSX1-206ENST00000444511 NEUROG3Q9Y4Z2 214 aa21.78■■□□□ 1.08
VSX1-206ENST00000444511 CEP83Q9Y592 693 aa21.78■■□□□ 1.08
VSX1-206ENST00000444511 USP24Q9UPU5 2620 aa21.78■■□□□ 1.08
VSX1-206ENST00000444511 BECN2A8MW95 431 aa21.77■■□□□ 1.08
VSX1-206ENST00000444511 RNASEH1O60930 286 aaKnown RBP21.77■■□□□ 1.08
VSX1-206ENST00000444511 TACR2P21452 398 aa21.77■■□□□ 1.08
VSX1-206ENST00000444511 MTIF2P46199 727 aaKnown RBP21.77■■□□□ 1.08
VSX1-206ENST00000444511 AFF3P51826 1226 aaKnown RBP21.77■■□□□ 1.08
VSX1-206ENST00000444511 APBA1Q02410 837 aa21.77■■□□□ 1.08
VSX1-206ENST00000444511 TPD52L1Q16890 204 aaPredicted RBP21.77■■□□□ 1.08
VSX1-206ENST00000444511 ZNF423Q2M1K9 1284 aa21.77■■□□□ 1.08
VSX1-206ENST00000444511 HNRNPA1L2Q32P51 320 aaKnown RBP21.77■■□□□ 1.08
VSX1-206ENST00000444511 PITRM1Q5JRX3 1037 aa21.77■■□□□ 1.08
VSX1-206ENST00000444511 ATP6V0D2Q8N8Y2 350 aa21.77■■□□□ 1.08
VSX1-206ENST00000444511 C1orf216Q8TAB5 229 aa21.77■■□□□ 1.08
VSX1-206ENST00000444511 GANCQ8TET4 914 aa21.77■■□□□ 1.08
VSX1-206ENST00000444511 MYO19Q96H55 970 aa21.77■■□□□ 1.08
VSX1-206ENST00000444511 RSPH9Q9H1X1 276 aaPredicted RBP21.77■■□□□ 1.08
VSX1-206ENST00000444511 FAM204AQ9H8W3 233 aa21.77■■□□□ 1.08
VSX1-206ENST00000444511 IL21RQ9HBE5 538 aa21.77■■□□□ 1.08
VSX1-206ENST00000444511 SGK2Q9HBY8 427 aa21.77■■□□□ 1.08
VSX1-206ENST00000444511 SLTMQ9NWH9 1034 aaKnown RBP eCLIP21.77■■□□□ 1.08
VSX1-206ENST00000444511 KIAA1522Q9P206 1035 aaPredicted RBP21.77■■□□□ 1.08
VSX1-206ENST00000444511 SLC12A6Q9UHW9 1150 aa21.77■■□□□ 1.08
VSX1-206ENST00000444511 A0A1B0GVT2 93 aa21.76■■□□□ 1.07
VSX1-206ENST00000444511 GTPBP10A4D1E9 387 aaKnown RBP21.76■■□□□ 1.07
VSX1-206ENST00000444511 F5H5T6 163 aa21.76■■□□□ 1.07
VSX1-206ENST00000444511 SIN3BO75182 1162 aa21.76■■□□□ 1.07
VSX1-206ENST00000444511 FSBPO95073 299 aa21.76■■□□□ 1.07
VSX1-206ENST00000444511 IGLV3-25P01717 112 aa21.76■■□□□ 1.07
VSX1-206ENST00000444511 CSNK1EP49674 416 aaKnown RBP21.76■■□□□ 1.07
VSX1-206ENST00000444511 CDK17Q00537 523 aa21.76■■□□□ 1.07
VSX1-206ENST00000444511 TAF5Q15542 800 aa21.76■■□□□ 1.07
VSX1-206ENST00000444511 TEAD4Q15561 434 aa21.76■■□□□ 1.07
VSX1-206ENST00000444511 HLA-BQ31612 363 aa21.76■■□□□ 1.07
VSX1-206ENST00000444511 RNF219Q5W0B1 726 aaPredicted RBP21.76■■□□□ 1.07
VSX1-206ENST00000444511 DHX40Q8IX18 779 aaKnown RBP21.76■■□□□ 1.07
VSX1-206ENST00000444511 MLKLQ8NB16 471 aa21.76■■□□□ 1.07
VSX1-206ENST00000444511 KDM1BQ8NB78 822 aa21.76■■□□□ 1.07
VSX1-206ENST00000444511 SHC3Q92529 594 aa21.76■■□□□ 1.07
VSX1-206ENST00000444511 MRGPRX3Q96LB0 322 aa21.76■■□□□ 1.07
VSX1-206ENST00000444511 TMEM121BQ9BXQ6 578 aaPredicted RBP21.76■■□□□ 1.07
VSX1-206ENST00000444511 KLK13Q9UKR3 277 aa21.76■■□□□ 1.07
VSX1-206ENST00000444511 SCML1Q9UN30 329 aa21.76■■□□□ 1.07
VSX1-206ENST00000444511 ERVW-1Q9UQF0 538 aa21.76■■□□□ 1.07
VSX1-206ENST00000444511 TMEM8BA6NDV4 472 aa21.75■■□□□ 1.07
VSX1-206ENST00000444511 SRPRAP08240 638 aaKnown RBP21.75■■□□□ 1.07
VSX1-206ENST00000444511 ABCB4P21439 1286 aa21.75■■□□□ 1.07
VSX1-206ENST00000444511 PON1P27169 355 aa21.75■■□□□ 1.07
VSX1-206ENST00000444511 PITX1P78337 314 aaPredicted RBP21.75■■□□□ 1.07
VSX1-206ENST00000444511 BNC1Q01954 994 aa21.75■■□□□ 1.07
VSX1-206ENST00000444511 SFSWAPQ12872 951 aaKnown RBP21.75■■□□□ 1.07
VSX1-206ENST00000444511 USP30Q70CQ3 517 aa21.75■■□□□ 1.07
VSX1-206ENST00000444511 PASD1Q8IV76 773 aa21.75■■□□□ 1.07
VSX1-206ENST00000444511 SETD7Q8WTS6 366 aaKnown RBP21.75■■□□□ 1.07
VSX1-206ENST00000444511 GATA6Q92908 595 aa21.75■■□□□ 1.07
VSX1-206ENST00000444511 RNF34Q969K3 372 aa21.75■■□□□ 1.07
VSX1-206ENST00000444511 BIRC7Q96CA5 298 aa21.75■■□□□ 1.07
VSX1-206ENST00000444511 PPP1R13BQ96KQ4 1090 aa21.75■■□□□ 1.07
VSX1-206ENST00000444511 NOX5Q96PH1 765 aa21.75■■□□□ 1.07
VSX1-206ENST00000444511 CPXM1Q96SM3 734 aa21.75■■□□□ 1.07
VSX1-206ENST00000444511 PABPC3Q9H361 631 aaKnown RBP21.75■■□□□ 1.07
VSX1-206ENST00000444511 TM7SF3Q9NS93 570 aa21.75■■□□□ 1.07
VSX1-206ENST00000444511 DDIT4Q9NX09 232 aa21.75■■□□□ 1.07
VSX1-206ENST00000444511 ZMIZ1Q9ULJ6 1067 aa21.75■■□□□ 1.07
VSX1-206ENST00000444511 FNDC3AQ9Y2H6 1198 aaKnown RBP21.75■■□□□ 1.07
VSX1-206ENST00000444511 MSRB2Q9Y3D2 182 aa21.75■■□□□ 1.07
VSX1-206ENST00000444511 SLCO1B1Q9Y6L6 691 aa21.75■■□□□ 1.07
VSX1-206ENST00000444511 CACNA1EQ15878 2313 aa21.74■■□□□ 1.07
VSX1-206ENST00000444511 SYNJ2BP-COX16A0A087WUM0 186 aa21.74■■□□□ 1.07
VSX1-206ENST00000444511 KCNU1A8MYU2 1149 aa21.74■■□□□ 1.07
VSX1-206ENST00000444511 GLI1P08151 1106 aa21.74■■□□□ 1.07
VSX1-206ENST00000444511 ZNF883P0CG24 379 aa21.74■■□□□ 1.07
VSX1-206ENST00000444511 SLC2A3P11169 496 aa21.74■■□□□ 1.07
VSX1-206ENST00000444511 CTSOP43234 321 aaPredicted RBP21.74■■□□□ 1.07
VSX1-206ENST00000444511 ECT2LQ008S8 904 aa21.74■■□□□ 1.07
VSX1-206ENST00000444511 PTK2Q05397 1052 aa21.74■■□□□ 1.07
VSX1-206ENST00000444511 ARID5BQ14865 1188 aa21.74■■□□□ 1.07
VSX1-206ENST00000444511 EFHC1Q5JVL4 640 aa21.74■■□□□ 1.07
VSX1-206ENST00000444511 IRF2BP1Q8IU81 584 aa21.74■■□□□ 1.07
VSX1-206ENST00000444511 DEFB106AQ8N104 65 aa21.74■■□□□ 1.07
VSX1-206ENST00000444511 CHCHD4Q8N4Q1 142 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms