RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 RTN4Q9NQC3 1192 aaKnown RBP11.59□□□□□ -0.55
RFFL-204ENST00000414419 VPS45Q9NRW7 570 aa11.59□□□□□ -0.55
RFFL-204ENST00000414419 SUN2Q9UH99 717 aa11.59□□□□□ -0.55
RFFL-204ENST00000414419 CYP8B1Q9UNU6 501 aa11.59□□□□□ -0.55
RFFL-204ENST00000414419 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.59□□□□□ -0.55
RFFL-204ENST00000414419 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.58□□□□□ -0.56
RFFL-204ENST00000414419 BCLAF3A2AJT9 711 aaKnown RBP11.58□□□□□ -0.56
RFFL-204ENST00000414419 TEX33O43247 280 aa11.58□□□□□ -0.56
RFFL-204ENST00000414419 ASLP04424 464 aa11.58□□□□□ -0.56
RFFL-204ENST00000414419 CYP1A1P04798 512 aaPredicted RBP11.58□□□□□ -0.56
RFFL-204ENST00000414419 DLDP09622 509 aaKnown RBP11.58□□□□□ -0.56
RFFL-204ENST00000414419 FERP16591 822 aa11.58□□□□□ -0.56
RFFL-204ENST00000414419 CHRNB2P17787 502 aa11.58□□□□□ -0.56
RFFL-204ENST00000414419 PRKCHP24723 683 aa11.58□□□□□ -0.56
RFFL-204ENST00000414419 OXCT1P55809 520 aa11.58□□□□□ -0.56
RFFL-204ENST00000414419 LMAN2Q12907 356 aa11.58□□□□□ -0.56
RFFL-204ENST00000414419 SKOR2Q2VWA4 1001 aaPredicted RBP11.58□□□□□ -0.56
RFFL-204ENST00000414419 SLC25A52Q3SY17 297 aa11.58□□□□□ -0.56
RFFL-204ENST00000414419 FUT11Q495W5 492 aa11.58□□□□□ -0.56
RFFL-204ENST00000414419 SPDYCQ5MJ68 293 aa11.58□□□□□ -0.56
RFFL-204ENST00000414419 BRMS1LQ5PSV4 323 aa11.58□□□□□ -0.56
RFFL-204ENST00000414419 RNF219Q5W0B1 726 aaPredicted RBP11.58□□□□□ -0.56
RFFL-204ENST00000414419 RNF43Q68DV7 783 aa11.58□□□□□ -0.56
RFFL-204ENST00000414419 MMS22LQ6ZRQ5 1243 aa11.58□□□□□ -0.56
RFFL-204ENST00000414419 ARMCX6Q7L4S7 300 aa11.58□□□□□ -0.56
RFFL-204ENST00000414419 APTXQ7Z2E3 356 aaKnown RBP11.58□□□□□ -0.56
RFFL-204ENST00000414419 TMPRSS6Q8IU80 811 aa11.58□□□□□ -0.56
RFFL-204ENST00000414419 FRMD1Q8N878 549 aa11.58□□□□□ -0.56
RFFL-204ENST00000414419 SLC30A5Q8TAD4 765 aa11.58□□□□□ -0.56
RFFL-204ENST00000414419 PIGKQ92643 395 aa11.58□□□□□ -0.56
RFFL-204ENST00000414419 RMDN1Q96DB5 314 aa11.58□□□□□ -0.56
RFFL-204ENST00000414419 SIPA1Q96FS4 1042 aa11.58□□□□□ -0.56
RFFL-204ENST00000414419 NPY6RQ99463 290 aa11.58□□□□□ -0.56
RFFL-204ENST00000414419 TKTL2Q9H0I9 626 aa11.58□□□□□ -0.56
RFFL-204ENST00000414419 SIK2Q9H0K1 926 aa11.58□□□□□ -0.56
RFFL-204ENST00000414419 SLC6A17Q9H1V8 727 aa11.58□□□□□ -0.56
RFFL-204ENST00000414419 VANGL2Q9ULK5 521 aa11.58□□□□□ -0.56
RFFL-204ENST00000414419 DMXL1Q9Y485 3027 aa11.57□□□□□ -0.56
RFFL-204ENST00000414419 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.57□□□□□ -0.56
RFFL-204ENST00000414419 A0A1B0GVM2 712 aa11.57□□□□□ -0.56
RFFL-204ENST00000414419 TCAF2A6NFQ2 919 aa11.57□□□□□ -0.56
RFFL-204ENST00000414419 GOLGA6L19H0YKK7 550 aa11.57□□□□□ -0.56
RFFL-204ENST00000414419 PAGE1O75459 146 aa11.57□□□□□ -0.56
RFFL-204ENST00000414419 HLA-EP13747 358 aa11.57□□□□□ -0.56
RFFL-204ENST00000414419 MMP8P22894 467 aa11.57□□□□□ -0.56
RFFL-204ENST00000414419 NNMTP40261 264 aa11.57□□□□□ -0.56
RFFL-204ENST00000414419 CSKP41240 450 aa11.57□□□□□ -0.56
RFFL-204ENST00000414419 DPP6P42658 865 aa11.57□□□□□ -0.56
RFFL-204ENST00000414419 CXCR3P49682 368 aa11.57□□□□□ -0.56
RFFL-204ENST00000414419 ZNF177Q13360 481 aaPredicted RBP11.57□□□□□ -0.56
RFFL-204ENST00000414419 SLC12A1Q13621 1099 aa11.57□□□□□ -0.56
RFFL-204ENST00000414419 AUHQ13825 339 aaKnown RBP11.57□□□□□ -0.56
RFFL-204ENST00000414419 SF3A2Q15428 464 aaKnown RBP11.57□□□□□ -0.56
RFFL-204ENST00000414419 FSCBQ5H9T9 825 aa11.57□□□□□ -0.56
RFFL-204ENST00000414419 PITRM1Q5JRX3 1037 aa11.57□□□□□ -0.56
RFFL-204ENST00000414419 PLA2G2CQ5R387 149 aa11.57□□□□□ -0.56
RFFL-204ENST00000414419 ACBD5Q5T8D3 534 aaPredicted RBP11.57□□□□□ -0.56
RFFL-204ENST00000414419 LYSMD4Q5XG99 296 aa11.57□□□□□ -0.56
RFFL-204ENST00000414419 FBXL22Q6P050 247 aa11.57□□□□□ -0.56
RFFL-204ENST00000414419 LRSAM1Q6UWE0 723 aa11.57□□□□□ -0.56
RFFL-204ENST00000414419 LRRC31Q6UY01 552 aa11.57□□□□□ -0.56
RFFL-204ENST00000414419 ARCQ7LC44 396 aa11.57□□□□□ -0.56
RFFL-204ENST00000414419 CCAR2Q8N163 923 aaKnown RBP11.57□□□□□ -0.56
RFFL-204ENST00000414419 OR2T3Q8NH03 318 aa11.57□□□□□ -0.56
RFFL-204ENST00000414419 NETO1Q8TDF5 533 aa11.57□□□□□ -0.56
RFFL-204ENST00000414419 NT5C3BQ969T7 300 aa11.57□□□□□ -0.56
RFFL-204ENST00000414419 TTC17Q96AE7 1141 aa11.57□□□□□ -0.56
RFFL-204ENST00000414419 MYEOVQ96EZ4 313 aa11.57□□□□□ -0.56
RFFL-204ENST00000414419 PGAP3Q96FM1 320 aaPredicted RBP11.57□□□□□ -0.56
RFFL-204ENST00000414419 CFAP57Q96MR6 1250 aa11.57□□□□□ -0.56
RFFL-204ENST00000414419 TBCBQ99426 244 aa11.57□□□□□ -0.56
RFFL-204ENST00000414419 PRMT1Q99873 361 aaKnown RBP11.57□□□□□ -0.56
RFFL-204ENST00000414419 AGPAT1Q99943 283 aa11.57□□□□□ -0.56
RFFL-204ENST00000414419 C11orf70Q9BRQ4 267 aa11.57□□□□□ -0.56
RFFL-204ENST00000414419 FUCA2Q9BTY2 467 aa11.57□□□□□ -0.56
RFFL-204ENST00000414419 SELENOOQ9BVL4 669 aa11.57□□□□□ -0.56
RFFL-204ENST00000414419 TMEM245Q9H330 911 aa11.57□□□□□ -0.56
RFFL-204ENST00000414419 FBRSQ9HAH7 460 aa11.57□□□□□ -0.56
RFFL-204ENST00000414419 CD248Q9HCU0 757 aa11.57□□□□□ -0.56
RFFL-204ENST00000414419 METTL5Q9NRN9 209 aaKnown RBP11.57□□□□□ -0.56
RFFL-204ENST00000414419 PIGVQ9NUD9 493 aa11.57□□□□□ -0.56
RFFL-204ENST00000414419 ADAM22Q9P0K1 906 aa11.57□□□□□ -0.56
RFFL-204ENST00000414419 MBD1Q9UIS9 605 aaPredicted RBP11.57□□□□□ -0.56
RFFL-204ENST00000414419 HS3ST4Q9Y661 456 aa11.57□□□□□ -0.56
RFFL-204ENST00000414419 DOCK4Q8N1I0 1966 aa11.57□□□□□ -0.56
RFFL-204ENST00000414419 TNRC6BQ9UPQ9 1833 aaKnown RBP11.56□□□□□ -0.56
RFFL-204ENST00000414419 IGHV1OR15-9A0A0B4J2B8 117 aa11.56□□□□□ -0.56
RFFL-204ENST00000414419 KHNYNO15037 678 aaKnown RBP11.56□□□□□ -0.56
RFFL-204ENST00000414419 ADCY5O95622 1261 aa11.56□□□□□ -0.56
RFFL-204ENST00000414419 CALB1P05937 261 aa11.56□□□□□ -0.56
RFFL-204ENST00000414419 SRPRAP08240 638 aaKnown RBP11.56□□□□□ -0.56
RFFL-204ENST00000414419 UNGP13051 313 aaPredicted RBP11.56□□□□□ -0.56
RFFL-204ENST00000414419 PDGFRAP16234 1089 aa11.56□□□□□ -0.56
RFFL-204ENST00000414419 TNFAIP3P21580 790 aa11.56□□□□□ -0.56
RFFL-204ENST00000414419 CD6P30203 668 aa11.56□□□□□ -0.56
RFFL-204ENST00000414419 OXTRP30559 389 aa11.56□□□□□ -0.56
RFFL-204ENST00000414419 SDC4P31431 198 aa11.56□□□□□ -0.56
RFFL-204ENST00000414419 RDXP35241 583 aaKnown RBP11.56□□□□□ -0.56
RFFL-204ENST00000414419 FLT3P36888 993 aa11.56□□□□□ -0.56
RFFL-204ENST00000414419 ATP11AP98196 1134 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms