RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 RNPEPL1Q9HAU8 725 aa15.82■□□□□ 0.12
CPSF7-202ENST00000394888 KRT82Q9NSB4 513 aa15.82■□□□□ 0.12
CPSF7-202ENST00000394888 ALDH3A1P30838 453 aa15.81■□□□□ 0.12
CPSF7-202ENST00000394888 TKTL1P51854 596 aa15.81■□□□□ 0.12
CPSF7-202ENST00000394888 CDK18Q07002 472 aa15.81■□□□□ 0.12
CPSF7-202ENST00000394888 KHDC1Q4VXA5 237 aaKnown RBP15.81■□□□□ 0.12
CPSF7-202ENST00000394888 CES3Q6UWW8 571 aa15.81■□□□□ 0.12
CPSF7-202ENST00000394888 APBB2Q92870 758 aa15.81■□□□□ 0.12
CPSF7-202ENST00000394888 GBF1Q92538 1859 aa15.81■□□□□ 0.12
CPSF7-202ENST00000394888 F8W810 466 aa15.81■□□□□ 0.12
CPSF7-202ENST00000394888 PROCP04070 461 aa15.81■□□□□ 0.12
CPSF7-202ENST00000394888 SBK3P0C264 359 aa15.81■□□□□ 0.12
CPSF7-202ENST00000394888 FAM163BP0C2L3 166 aa15.81■□□□□ 0.12
CPSF7-202ENST00000394888 CPOXP36551 454 aa15.81■□□□□ 0.12
CPSF7-202ENST00000394888 PPIDQ08752 370 aaKnown RBP15.81■□□□□ 0.12
CPSF7-202ENST00000394888 UPP1Q16831 310 aa15.81■□□□□ 0.12
CPSF7-202ENST00000394888 GDF6Q6KF10 455 aaPredicted RBP15.81■□□□□ 0.12
CPSF7-202ENST00000394888 TMEM135Q86UB9 458 aa15.81■□□□□ 0.12
CPSF7-202ENST00000394888 CTAGE3PQ8IX95 158 aa15.81■□□□□ 0.12
CPSF7-202ENST00000394888 PLD6Q8N2A8 252 aaKnown RBP15.81■□□□□ 0.12
CPSF7-202ENST00000394888 AGO3Q9H9G7 860 aaKnown RBP15.81■□□□□ 0.12
CPSF7-202ENST00000394888 ZNF358Q9NW07 568 aa15.81■□□□□ 0.12
CPSF7-202ENST00000394888 TIMM13Q9Y5L4 95 aaPredicted RBP15.81■□□□□ 0.12
CPSF7-202ENST00000394888 CCDC195A0A1B0GUA6 201 aa15.81■□□□□ 0.12
CPSF7-202ENST00000394888 SDR42E2A6NKP2 422 aa15.81■□□□□ 0.12
CPSF7-202ENST00000394888 FCHO1O14526 889 aa15.81■□□□□ 0.12
CPSF7-202ENST00000394888 B4GALT3O60512 393 aa15.81■□□□□ 0.12
CPSF7-202ENST00000394888 OPHN1O60890 802 aa15.81■□□□□ 0.12
CPSF7-202ENST00000394888 LYPLA1O75608 230 aaPredicted RBP15.81■□□□□ 0.12
CPSF7-202ENST00000394888 CYP2B6P20813 491 aa15.81■□□□□ 0.12
CPSF7-202ENST00000394888 FDFT1P37268 417 aa15.81■□□□□ 0.12
CPSF7-202ENST00000394888 CHI3L2Q15782 390 aa15.81■□□□□ 0.12
CPSF7-202ENST00000394888 NDUFAF2Q8N183 169 aa15.81■□□□□ 0.12
CPSF7-202ENST00000394888 OXCT2Q9BYC2 517 aaPredicted RBP15.81■□□□□ 0.12
CPSF7-202ENST00000394888 TRIM55Q9BYV6 548 aa15.81■□□□□ 0.12
CPSF7-202ENST00000394888 CASS4Q9NQ75 786 aa15.81■□□□□ 0.12
CPSF7-202ENST00000394888 Q9Y3F1 56 aa15.81■□□□□ 0.12
CPSF7-202ENST00000394888 BIRC5O15392 142 aa15.8■□□□□ 0.12
CPSF7-202ENST00000394888 ERCC2P18074 760 aa15.8■□□□□ 0.12
CPSF7-202ENST00000394888 FKBP1BP68106 108 aa15.8■□□□□ 0.12
CPSF7-202ENST00000394888 DEPDC1BQ8WUY9 529 aa15.8■□□□□ 0.12
CPSF7-202ENST00000394888 AZIN2Q96A70 460 aa15.8■□□□□ 0.12
CPSF7-202ENST00000394888 SENP8Q96LD8 212 aa15.8■□□□□ 0.12
CPSF7-202ENST00000394888 TMEM209Q96SK2 561 aa15.8■□□□□ 0.12
CPSF7-202ENST00000394888 SLC9A7Q96T83 725 aa15.8■□□□□ 0.12
CPSF7-202ENST00000394888 TSPYL2Q9H2G4 693 aaPredicted RBP15.8■□□□□ 0.12
CPSF7-202ENST00000394888 DDX43Q9NXZ2 648 aaKnown RBP15.8■□□□□ 0.12
CPSF7-202ENST00000394888 CASP8AP2Q9UKL3 1982 aa15.8■□□□□ 0.12
CPSF7-202ENST00000394888 KCNK1O00180 336 aa15.8■□□□□ 0.12
CPSF7-202ENST00000394888 KRT37O76014 449 aa15.8■□□□□ 0.12
CPSF7-202ENST00000394888 PGAM1P18669 254 aa15.8■□□□□ 0.12
CPSF7-202ENST00000394888 ARFIP2P53365 341 aa15.8■□□□□ 0.12
CPSF7-202ENST00000394888 PM20D1Q6GTS8 502 aa15.8■□□□□ 0.12
CPSF7-202ENST00000394888 FAM171BQ6P995 826 aa15.8■□□□□ 0.12
CPSF7-202ENST00000394888 RAB3IL1Q8TBN0 382 aa15.8■□□□□ 0.12
CPSF7-202ENST00000394888 BTBD10Q9BSF8 475 aa15.8■□□□□ 0.12
CPSF7-202ENST00000394888 TRIM6Q9C030 488 aaPredicted RBP15.8■□□□□ 0.12
CPSF7-202ENST00000394888 KCNK4Q9NYG8 393 aa15.8■□□□□ 0.12
CPSF7-202ENST00000394888 MTO1Q9Y2Z2 717 aaKnown RBP15.8■□□□□ 0.12
CPSF7-202ENST00000394888 MAD1L1Q9Y6D9 718 aa15.8■□□□□ 0.12
CPSF7-202ENST00000394888 ARL5CA6NH57 179 aa15.8■□□□□ 0.12
CPSF7-202ENST00000394888 PLIN3O60664 434 aa15.8■□□□□ 0.12
CPSF7-202ENST00000394888 HUS1O60921 280 aa15.8■□□□□ 0.12
CPSF7-202ENST00000394888 ALOX15P16050 662 aaPredicted RBP15.8■□□□□ 0.12
CPSF7-202ENST00000394888 GALNT2Q10471 571 aa15.8■□□□□ 0.12
CPSF7-202ENST00000394888 FRG1Q14331 258 aaKnown RBP15.8■□□□□ 0.12
CPSF7-202ENST00000394888 LRRTM3Q86VH5 581 aa15.8■□□□□ 0.12
CPSF7-202ENST00000394888 CNTD1Q8N815 330 aa15.8■□□□□ 0.12
CPSF7-202ENST00000394888 TNIP3Q96KP6 325 aa15.8■□□□□ 0.12
CPSF7-202ENST00000394888 AGAP2Q99490 1192 aa15.8■□□□□ 0.12
CPSF7-202ENST00000394888 C17orf102A2RUQ5 167 aa15.79■□□□□ 0.12
CPSF7-202ENST00000394888 ZBTB24O43167 697 aaPredicted RBP15.79■□□□□ 0.12
CPSF7-202ENST00000394888 ERVK-10P10266 1014 aa15.79■□□□□ 0.12
CPSF7-202ENST00000394888 HCAR3P49019 387 aa15.79■□□□□ 0.12
CPSF7-202ENST00000394888 AP1B1Q10567 949 aa15.79■□□□□ 0.12
CPSF7-202ENST00000394888 SETDB1Q15047 1291 aa15.79■□□□□ 0.12
CPSF7-202ENST00000394888 SMAD1Q15797 465 aaKnown RBP15.79■□□□□ 0.12
CPSF7-202ENST00000394888 ACSBG2Q5FVE4 666 aa15.79■□□□□ 0.12
CPSF7-202ENST00000394888 NAPRTQ6XQN6 538 aa15.79■□□□□ 0.12
CPSF7-202ENST00000394888 OR52K1Q8NGK4 314 aa15.79■□□□□ 0.12
CPSF7-202ENST00000394888 SH3TC2Q8TF17 1288 aa15.79■□□□□ 0.12
CPSF7-202ENST00000394888 E2F7Q96AV8 911 aa15.79■□□□□ 0.12
CPSF7-202ENST00000394888 ITGA2BP08514 1039 aa15.79■□□□□ 0.12
CPSF7-202ENST00000394888 USP17L7P0C7H9 530 aa15.79■□□□□ 0.12
CPSF7-202ENST00000394888 CXCR3P49682 368 aa15.79■□□□□ 0.12
CPSF7-202ENST00000394888 NME3Q13232 169 aa15.79■□□□□ 0.12
CPSF7-202ENST00000394888 TIGD5Q53EQ6 642 aa15.79■□□□□ 0.12
CPSF7-202ENST00000394888 ARHGAP36Q6ZRI8 547 aa15.79■□□□□ 0.12
CPSF7-202ENST00000394888 HACE1Q8IYU2 909 aa15.79■□□□□ 0.12
CPSF7-202ENST00000394888 NME8Q8N427 588 aa15.79■□□□□ 0.12
CPSF7-202ENST00000394888 TMEM216Q9P0N5 145 aa15.79■□□□□ 0.12
CPSF7-202ENST00000394888 USP12O75317 370 aa15.79■□□□□ 0.12
CPSF7-202ENST00000394888 MYL3P08590 195 aa15.79■□□□□ 0.12
CPSF7-202ENST00000394888 CALB2P22676 271 aa15.79■□□□□ 0.12
CPSF7-202ENST00000394888 MRPL10Q7Z7H8 261 aaKnown RBP15.79■□□□□ 0.12
CPSF7-202ENST00000394888 GAD1Q99259 594 aa15.79■□□□□ 0.12
CPSF7-202ENST00000394888 PRDM16Q9HAZ2 1276 aa15.79■□□□□ 0.12
CPSF7-202ENST00000394888 FAM105AQ9NUU6 356 aa15.79■□□□□ 0.12
CPSF7-202ENST00000394888 ST3GAL5Q9UNP4 418 aa15.79■□□□□ 0.12
CPSF7-202ENST00000394888 LRRC42Q9Y546 428 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms