RNA–Protein interactions for RNA: ENSMUST00000216558.1

Ubp1-206, Transcript of Upstream-binding protein 1, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Ubp1, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1-206ENSMUST00000216558 Atg14Q8CDJ3 492 aa16.07■□□□□ 0.16
Ubp1-206ENSMUST00000216558 Znf276Q8CE64 614 aa16.07■□□□□ 0.16
Ubp1-206ENSMUST00000216558 Acvr1cQ8K348 493 aa16.07■□□□□ 0.16
Ubp1-206ENSMUST00000216558 Etv3Q8R4Z4 513 aa16.07■□□□□ 0.16
Ubp1-206ENSMUST00000216558 Caap1Q8VDY9 356 aa16.07■□□□□ 0.16
Ubp1-206ENSMUST00000216558 Aipl1Q924K1 328 aa16.07■□□□□ 0.16
Ubp1-206ENSMUST00000216558 Slc12a6Q924N4 1150 aa16.07■□□□□ 0.16
Ubp1-206ENSMUST00000216558 Ophn1Q99J31 802 aa16.07■□□□□ 0.16
Ubp1-206ENSMUST00000216558 NonoQ99K48 473 aaKnown RBP16.07■□□□□ 0.16
Ubp1-206ENSMUST00000216558 Mrps17Q9CQE3 120 aaKnown RBP16.07■□□□□ 0.16
Ubp1-206ENSMUST00000216558 Lgals2Q9CQW5 130 aa16.07■□□□□ 0.16
Ubp1-206ENSMUST00000216558 Fam173bQ9D1Z3 247 aa16.07■□□□□ 0.16
Ubp1-206ENSMUST00000216558 Pramef12Q9D2F1 463 aa16.07■□□□□ 0.16
Ubp1-206ENSMUST00000216558 ArskQ9D2L1 553 aa16.07■□□□□ 0.16
Ubp1-206ENSMUST00000216558 Krt20Q9D312 431 aa16.07■□□□□ 0.16
Ubp1-206ENSMUST00000216558 M1apQ9Z0E1 529 aa16.07■□□□□ 0.16
Ubp1-206ENSMUST00000216558 Scn8aQ9WTU3 1978 aa16.06■□□□□ 0.16
Ubp1-206ENSMUST00000216558 Pramef17A2ASJ1 475 aa16.06■□□□□ 0.16
Ubp1-206ENSMUST00000216558 Ccdc24E9PUW8 296 aa16.06■□□□□ 0.16
Ubp1-206ENSMUST00000216558 March10E9PX79 788 aa16.06■□□□□ 0.16
Ubp1-206ENSMUST00000216558 Akain1G3UWD5 69 aa16.06■□□□□ 0.16
Ubp1-206ENSMUST00000216558 Vmn2r88L7N1W8 857 aa16.06■□□□□ 0.16
Ubp1-206ENSMUST00000216558 ZfaP23607 742 aa16.06■□□□□ 0.16
Ubp1-206ENSMUST00000216558 Cyp17a1P27786 507 aa16.06■□□□□ 0.16
Ubp1-206ENSMUST00000216558 Nudt1P53368 156 aa16.06■□□□□ 0.16
Ubp1-206ENSMUST00000216558 Dpf3P58269 378 aa16.06■□□□□ 0.16
Ubp1-206ENSMUST00000216558 Pkn1P70268 946 aa16.06■□□□□ 0.16
Ubp1-206ENSMUST00000216558 Irx2P81066 474 aa16.06■□□□□ 0.16
Ubp1-206ENSMUST00000216558 Pdss1Q33DR2 409 aa16.06■□□□□ 0.16
Ubp1-206ENSMUST00000216558 Cand1Q6ZQ38 1230 aa16.06■□□□□ 0.16
Ubp1-206ENSMUST00000216558 Defb34Q7TNV8 81 aa16.06■□□□□ 0.16
Ubp1-206ENSMUST00000216558 CcnyQ8BGU5 341 aa16.06■□□□□ 0.16
Ubp1-206ENSMUST00000216558 Gdap1l1Q8VE33 370 aa16.06■□□□□ 0.16
Ubp1-206ENSMUST00000216558 Tbc1d16A2ABG4 766 aa16.05■□□□□ 0.16
Ubp1-206ENSMUST00000216558 Vmn2r27D3YUK6 857 aa16.05■□□□□ 0.16
Ubp1-206ENSMUST00000216558 Grip2G3XA20 1042 aa16.05■□□□□ 0.16
Ubp1-206ENSMUST00000216558 BC024978J3QPC3 361 aa16.05■□□□□ 0.16
Ubp1-206ENSMUST00000216558 Dusp8O09112 663 aa16.05■□□□□ 0.16
Ubp1-206ENSMUST00000216558 TertO70372 1122 aa16.05■□□□□ 0.16
Ubp1-206ENSMUST00000216558 Hsd17b7O88736 334 aa16.05■□□□□ 0.16
Ubp1-206ENSMUST00000216558 Kif5cP28738 956 aaKnown RBP16.05■□□□□ 0.16
Ubp1-206ENSMUST00000216558 Psma2P49722 234 aa16.05■□□□□ 0.16
Ubp1-206ENSMUST00000216558 PhbP67778 272 aaKnown RBP16.05■□□□□ 0.16
Ubp1-206ENSMUST00000216558 Irf7P70434 457 aa16.05■□□□□ 0.16
Ubp1-206ENSMUST00000216558 Gabpb1Q00420 383 aa16.05■□□□□ 0.16
Ubp1-206ENSMUST00000216558 Grb7Q03160 535 aa16.05■□□□□ 0.16
Ubp1-206ENSMUST00000216558 Cdk16Q04735 496 aa16.05■□□□□ 0.16
Ubp1-206ENSMUST00000216558 DmwdQ08274 665 aa16.05■□□□□ 0.16
Ubp1-206ENSMUST00000216558 Col19a1Q0VF58 1136 aa16.05■□□□□ 0.16
Ubp1-206ENSMUST00000216558 Pyroxd1Q3TMV7 498 aa16.05■□□□□ 0.16
Ubp1-206ENSMUST00000216558 Gpd1lQ3ULJ0 351 aa16.05■□□□□ 0.16
Ubp1-206ENSMUST00000216558 Ppp1r1bQ60829 194 aa16.05■□□□□ 0.16
Ubp1-206ENSMUST00000216558 Kpna1Q60960 538 aa16.05■□□□□ 0.16
Ubp1-206ENSMUST00000216558 StilQ60988 1262 aa16.05■□□□□ 0.16
Ubp1-206ENSMUST00000216558 Ppp1r26Q6A025 1163 aa16.05■□□□□ 0.16
Ubp1-206ENSMUST00000216558 Rtl3Q6P1Y1 553 aa16.05■□□□□ 0.16
Ubp1-206ENSMUST00000216558 Arhgap26Q6ZQ82 814 aa16.05■□□□□ 0.16
Ubp1-206ENSMUST00000216558 Abcg2Q7TMS5 657 aa16.05■□□□□ 0.16
Ubp1-206ENSMUST00000216558 Q80WR5 230 aa16.05■□□□□ 0.16
Ubp1-206ENSMUST00000216558 Trpa1Q8BLA8 1125 aa16.05■□□□□ 0.16
Ubp1-206ENSMUST00000216558 Usp43Q8BUM9 1132 aa16.05■□□□□ 0.16
Ubp1-206ENSMUST00000216558 Mpp7Q8BVD5 576 aa16.05■□□□□ 0.16
Ubp1-206ENSMUST00000216558 Q8BWG4 1187 aa16.05■□□□□ 0.16
Ubp1-206ENSMUST00000216558 Afap1l1Q8BZI0 768 aa16.05■□□□□ 0.16
Ubp1-206ENSMUST00000216558 Nlrp4bQ8C6J9 863 aa16.05■□□□□ 0.16
Ubp1-206ENSMUST00000216558 Fbxl13Q8CDU4 790 aa16.05■□□□□ 0.16
Ubp1-206ENSMUST00000216558 Fads1Q920L1 447 aa16.05■□□□□ 0.16
Ubp1-206ENSMUST00000216558 Rpl17Q9CPR4 184 aaKnown RBP16.05■□□□□ 0.16
Ubp1-206ENSMUST00000216558 Tdrd12Q9CWU0 1215 aa16.05■□□□□ 0.16
Ubp1-206ENSMUST00000216558 TarsQ9D0R2 722 aaKnown RBP16.05■□□□□ 0.16
Ubp1-206ENSMUST00000216558 Cndp2Q9D1A2 475 aaKnown RBP16.05■□□□□ 0.16
Ubp1-206ENSMUST00000216558 Stat2Q9WVL2 923 aa16.05■□□□□ 0.16
Ubp1-206ENSMUST00000216558 Gm11983V9GXS8 105 aa16.05■□□□□ 0.16
Ubp1-206ENSMUST00000216558 Scn5aQ9JJV9 2019 aa16.05■□□□□ 0.16
Ubp1-206ENSMUST00000216558 Arfip1G5E8V9 373 aa16.05■□□□□ 0.16
Ubp1-206ENSMUST00000216558 Casq2O09161 415 aa16.05■□□□□ 0.16
Ubp1-206ENSMUST00000216558 PigrO70570 771 aa16.05■□□□□ 0.16
Ubp1-206ENSMUST00000216558 SrgnP13609 152 aa16.05■□□□□ 0.16
Ubp1-206ENSMUST00000216558 Slc2a4P14142 509 aa16.05■□□□□ 0.16
Ubp1-206ENSMUST00000216558 Rag1P15919 1040 aa16.05■□□□□ 0.16
Ubp1-206ENSMUST00000216558 RxrbP28704 520 aa16.05■□□□□ 0.16
Ubp1-206ENSMUST00000216558 Htr2cP34968 459 aa16.05■□□□□ 0.16
Ubp1-206ENSMUST00000216558 PorP37040 678 aa16.05■□□□□ 0.16
Ubp1-206ENSMUST00000216558 Elk3P41971 409 aa16.05■□□□□ 0.16
Ubp1-206ENSMUST00000216558 CkbQ04447 381 aa16.05■□□□□ 0.16
Ubp1-206ENSMUST00000216558 Rtel1Q0VGM9 1203 aa16.05■□□□□ 0.16
Ubp1-206ENSMUST00000216558 Birc2Q62210 612 aa16.05■□□□□ 0.16
Ubp1-206ENSMUST00000216558 Parp6Q6P6P7 630 aa16.05■□□□□ 0.16
Ubp1-206ENSMUST00000216558 Dpy19l3Q71B07 716 aa16.05■□□□□ 0.16
Ubp1-206ENSMUST00000216558 TwistnbQ78WZ7 330 aaKnown RBP16.05■□□□□ 0.16
Ubp1-206ENSMUST00000216558 Xylt1Q811B1 953 aa16.05■□□□□ 0.16
Ubp1-206ENSMUST00000216558 Ofcc1Q8BGX4 166 aa16.05■□□□□ 0.16
Ubp1-206ENSMUST00000216558 Arhgap18Q8K0Q5 663 aa16.05■□□□□ 0.16
Ubp1-206ENSMUST00000216558 DutQ8VCG1 200 aaKnown RBP16.05■□□□□ 0.16
Ubp1-206ENSMUST00000216558 Pcdhb11Q91UZ8 797 aa16.05■□□□□ 0.16
Ubp1-206ENSMUST00000216558 Reep3Q99KK1 254 aa16.05■□□□□ 0.16
Ubp1-206ENSMUST00000216558 Polr3cQ9D483 533 aa16.05■□□□□ 0.16
Ubp1-206ENSMUST00000216558 1700013H16RikQ9DAC5 291 aa16.05■□□□□ 0.16
Ubp1-206ENSMUST00000216558 Krt71Q9R0H5 524 aa16.05■□□□□ 0.16
Ubp1-206ENSMUST00000216558 Ighv11-2A0A075B5R8 117 aa16.04■□□□□ 0.16
Retrieved 100 of 22,080 RNA–protein pairs in 33.3 ms