RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 RAB11FIP4Q86YS3 637 aa4.25□□□□□ -1.73
CKS1BP3-201ENST00000600888 GPC2Q8N158 579 aa4.25□□□□□ -1.73
CKS1BP3-201ENST00000600888 GRAPLQ8TC17 118 aaPredicted RBP4.25□□□□□ -1.73
CKS1BP3-201ENST00000600888 PARD3BQ8TEW8 1205 aa4.25□□□□□ -1.73
CKS1BP3-201ENST00000600888 TBC1D5Q92609 795 aa4.25□□□□□ -1.73
CKS1BP3-201ENST00000600888 SARAFQ96BY9 339 aa4.25□□□□□ -1.73
CKS1BP3-201ENST00000600888 ZC3H10Q96K80 434 aaKnown RBP4.25□□□□□ -1.73
CKS1BP3-201ENST00000600888 BBC3Q96PG8 261 aaPredicted RBP4.25□□□□□ -1.73
CKS1BP3-201ENST00000600888 VN1R3Q9BXE9 311 aa4.25□□□□□ -1.73
CKS1BP3-201ENST00000600888 INO80BQ9C086 356 aaPredicted RBP4.25□□□□□ -1.73
CKS1BP3-201ENST00000600888 AS3MTQ9HBK9 375 aa4.25□□□□□ -1.73
CKS1BP3-201ENST00000600888 GJB4Q9NTQ9 266 aa4.25□□□□□ -1.73
CKS1BP3-201ENST00000600888 PHTF1Q9UMS5 762 aa4.25□□□□□ -1.73
CKS1BP3-201ENST00000600888 COL4A1P02462 1669 aa4.25□□□□□ -1.73
CKS1BP3-201ENST00000600888 FANCIQ9NVI1 1328 aa4.24□□□□□ -1.73
CKS1BP3-201ENST00000600888 ECM29Q5VYK3 1845 aa4.24□□□□□ -1.73
CKS1BP3-201ENST00000600888 A0A1W2PPC4 97 aa4.24□□□□□ -1.73
CKS1BP3-201ENST00000600888 PI4KAP2A4QPH2 592 aa4.24□□□□□ -1.73
CKS1BP3-201ENST00000600888 CLCA1A8K7I4 914 aa4.24□□□□□ -1.73
CKS1BP3-201ENST00000600888 AP4M1O00189 453 aa4.24□□□□□ -1.73
CKS1BP3-201ENST00000600888 PSMD9O00233 223 aa4.24□□□□□ -1.73
CKS1BP3-201ENST00000600888 ZNF213O14771 459 aa4.24□□□□□ -1.73
CKS1BP3-201ENST00000600888 APOL1O14791 398 aa4.24□□□□□ -1.73
CKS1BP3-201ENST00000600888 PPFIA2O75334 1257 aa4.24□□□□□ -1.73
CKS1BP3-201ENST00000600888 PMPCBO75439 489 aa4.24□□□□□ -1.73
CKS1BP3-201ENST00000600888 DDNO94850 711 aaPredicted RBP4.24□□□□□ -1.73
CKS1BP3-201ENST00000600888 IGKV5-2P06315 115 aa4.24□□□□□ -1.73
CKS1BP3-201ENST00000600888 NPSP0C0P6 89 aa4.24□□□□□ -1.73
CKS1BP3-201ENST00000600888 CTGFP29279 349 aa4.24□□□□□ -1.73
CKS1BP3-201ENST00000600888 TM4SF4P48230 202 aa4.24□□□□□ -1.73
CKS1BP3-201ENST00000600888 ALDH5A1P51649 535 aaPredicted RBP4.24□□□□□ -1.73
CKS1BP3-201ENST00000600888 PGDP52209 483 aa4.24□□□□□ -1.73
CKS1BP3-201ENST00000600888 CYP1B1Q16678 543 aa4.24□□□□□ -1.73
CKS1BP3-201ENST00000600888 LONRF1Q17RB8 773 aa4.24□□□□□ -1.73
CKS1BP3-201ENST00000600888 FAM209BQ5JX69 171 aa4.24□□□□□ -1.73
CKS1BP3-201ENST00000600888 MANEALQ5VSG8 457 aa4.24□□□□□ -1.73
CKS1BP3-201ENST00000600888 CEP85Q6P2H3 762 aa4.24□□□□□ -1.73
CKS1BP3-201ENST00000600888 MZT2AQ6P582 158 aa4.24□□□□□ -1.73
CKS1BP3-201ENST00000600888 MTHFD1LQ6UB35 978 aa4.24□□□□□ -1.73
CKS1BP3-201ENST00000600888 OLFM4Q6UX06 510 aa4.24□□□□□ -1.73
CKS1BP3-201ENST00000600888 CATSPERGQ6ZRH7 1159 aa4.24□□□□□ -1.73
CKS1BP3-201ENST00000600888 SLC29A4Q7RTT9 530 aa4.24□□□□□ -1.73
CKS1BP3-201ENST00000600888 AMIGO2Q86SJ2 522 aa4.24□□□□□ -1.73
CKS1BP3-201ENST00000600888 PI4KAP1Q8N8J0 262 aa4.24□□□□□ -1.73
CKS1BP3-201ENST00000600888 FANCBQ8NB91 859 aa4.24□□□□□ -1.73
CKS1BP3-201ENST00000600888 ABHD11Q8NFV4 315 aa4.24□□□□□ -1.73
CKS1BP3-201ENST00000600888 NELL1Q92832 810 aa4.24□□□□□ -1.73
CKS1BP3-201ENST00000600888 LRRC46Q96FV0 321 aa4.24□□□□□ -1.73
CKS1BP3-201ENST00000600888 ZNF668Q96K58 619 aaPredicted RBP4.24□□□□□ -1.73
CKS1BP3-201ENST00000600888 LENG8Q96PV6 779 aaPredicted RBP4.24□□□□□ -1.73
CKS1BP3-201ENST00000600888 FSD1LQ9BXM9 530 aa4.24□□□□□ -1.73
CKS1BP3-201ENST00000600888 TMX4Q9H1E5 349 aaPredicted RBP4.24□□□□□ -1.73
CKS1BP3-201ENST00000600888 CWC25Q9NXE8 425 aaPredicted RBP4.24□□□□□ -1.73
CKS1BP3-201ENST00000600888 MYO1AQ9UBC5 1043 aa4.24□□□□□ -1.73
CKS1BP3-201ENST00000600888 PADI4Q9UM07 663 aa4.24□□□□□ -1.73
CKS1BP3-201ENST00000600888 ADAMTS5Q9UNA0 930 aa4.24□□□□□ -1.73
CKS1BP3-201ENST00000600888 HPSEQ9Y251 543 aa4.24□□□□□ -1.73
CKS1BP3-201ENST00000600888 WNT6Q9Y6F9 365 aa4.24□□□□□ -1.73
CKS1BP3-201ENST00000600888 RTL9Q8NET4 1388 aa4.24□□□□□ -1.73
CKS1BP3-201ENST00000600888 ZNF541Q9H0D2 1346 aa4.23□□□□□ -1.73
CKS1BP3-201ENST00000600888 ZNF609O15014 1411 aa4.23□□□□□ -1.73
CKS1BP3-201ENST00000600888 A0A087WZ62 844 aa4.23□□□□□ -1.73
CKS1BP3-201ENST00000600888 CCER2I3L3R5 266 aa4.23□□□□□ -1.73
CKS1BP3-201ENST00000600888 AGPSO00116 658 aa4.23□□□□□ -1.73
CKS1BP3-201ENST00000600888 FGF18O76093 207 aa4.23□□□□□ -1.73
CKS1BP3-201ENST00000600888 JTBO76095 146 aa4.23□□□□□ -1.73
CKS1BP3-201ENST00000600888 TNFSF4P23510 183 aa4.23□□□□□ -1.73
CKS1BP3-201ENST00000600888 GKP32189 559 aa4.23□□□□□ -1.73
CKS1BP3-201ENST00000600888 RPS8P62241 208 aaKnown RBP4.23□□□□□ -1.73
CKS1BP3-201ENST00000600888 E2F1Q01094 437 aa4.23□□□□□ -1.73
CKS1BP3-201ENST00000600888 NEXNQ0ZGT2 675 aa4.23□□□□□ -1.73
CKS1BP3-201ENST00000600888 ARL13BQ3SXY8 428 aa4.23□□□□□ -1.73
CKS1BP3-201ENST00000600888 L1TD1Q5T7N2 865 aaKnown RBP4.23□□□□□ -1.73
CKS1BP3-201ENST00000600888 HIBCHQ6NVY1 386 aaPredicted RBP4.23□□□□□ -1.73
CKS1BP3-201ENST00000600888 DPY19L3Q6ZPD9 716 aa4.23□□□□□ -1.73
CKS1BP3-201ENST00000600888 NOL8Q76FK4 1167 aaKnown RBP4.23□□□□□ -1.73
CKS1BP3-201ENST00000600888 BEND5Q7L4P6 421 aa4.23□□□□□ -1.73
CKS1BP3-201ENST00000600888 ZNF804AQ7Z570 1209 aa4.23□□□□□ -1.73
CKS1BP3-201ENST00000600888 SIRT6Q8N6T7 355 aa4.23□□□□□ -1.73
CKS1BP3-201ENST00000600888 LINS1Q8NG48 757 aa4.23□□□□□ -1.73
CKS1BP3-201ENST00000600888 ZNF384Q8TF68 577 aa4.23□□□□□ -1.73
CKS1BP3-201ENST00000600888 BRI3BPQ8WY22 251 aa4.23□□□□□ -1.73
CKS1BP3-201ENST00000600888 CELF1Q92879 486 aaKnown RBP4.23□□□□□ -1.73
CKS1BP3-201ENST00000600888 CTHRC1Q96CG8 243 aa4.23□□□□□ -1.73
CKS1BP3-201ENST00000600888 REPS1Q96D71 796 aa4.23□□□□□ -1.73
CKS1BP3-201ENST00000600888 FAM227BQ96M60 508 aa4.23□□□□□ -1.73
CKS1BP3-201ENST00000600888 CCDC138Q96M89 665 aa4.23□□□□□ -1.73
CKS1BP3-201ENST00000600888 RIPOR3Q96MK2 946 aa4.23□□□□□ -1.73
CKS1BP3-201ENST00000600888 HIST1H2AAQ96QV6 131 aa4.23□□□□□ -1.73
CKS1BP3-201ENST00000600888 PRR25Q96S07 402 aa4.23□□□□□ -1.73
CKS1BP3-201ENST00000600888 MYD88Q99836 296 aa4.23□□□□□ -1.73
CKS1BP3-201ENST00000600888 THAP7Q9BT49 309 aaPredicted RBP4.23□□□□□ -1.73
CKS1BP3-201ENST00000600888 TAF1DQ9H5J8 278 aaPredicted RBP4.23□□□□□ -1.73
CKS1BP3-201ENST00000600888 MYH16Q9H6N6 1097 aa4.23□□□□□ -1.73
CKS1BP3-201ENST00000600888 HEYLQ9NQ87 328 aaPredicted RBP4.23□□□□□ -1.73
CKS1BP3-201ENST00000600888 DNAJB11Q9UBS4 358 aa4.23□□□□□ -1.73
CKS1BP3-201ENST00000600888 HACL1Q9UJ83 578 aa4.23□□□□□ -1.73
CKS1BP3-201ENST00000600888 AOX1Q06278 1338 aa4.22□□□□□ -1.73
CKS1BP3-201ENST00000600888 PASKQ96RG2 1323 aa4.22□□□□□ -1.73
CKS1BP3-201ENST00000600888 TARM1B6A8C7 271 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms