RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 SARM1Q6SZW1 724 aa17.88■□□□□ 0.45
SHKBP1-212ENST00000596163 VSTM4Q8IW00 320 aa17.88■□□□□ 0.45
SHKBP1-212ENST00000596163 SFTPA1Q8IWL2 248 aa17.88■□□□□ 0.45
SHKBP1-212ENST00000596163 DRC7Q8IY82 874 aa17.88■□□□□ 0.45
SHKBP1-212ENST00000596163 CHPFQ8IZ52 775 aa17.88■□□□□ 0.45
SHKBP1-212ENST00000596163 AHI1Q8N157 1196 aa17.88■□□□□ 0.45
SHKBP1-212ENST00000596163 EMC1Q8N766 993 aa17.88■□□□□ 0.45
SHKBP1-212ENST00000596163 TSTD1Q8NFU3 115 aa17.88■□□□□ 0.45
SHKBP1-212ENST00000596163 FIBINQ8TAL6 211 aa17.88■□□□□ 0.45
SHKBP1-212ENST00000596163 P2RY11Q96G91 374 aa17.88■□□□□ 0.45
SHKBP1-212ENST00000596163 TRIM5Q9C035 493 aa17.88■□□□□ 0.45
SHKBP1-212ENST00000596163 PARVAQ9NVD7 372 aa17.88■□□□□ 0.45
SHKBP1-212ENST00000596163 ZNHIT6Q9NWK9 470 aaKnown RBP17.88■□□□□ 0.45
SHKBP1-212ENST00000596163 ELOVL2Q9NXB9 296 aa17.88■□□□□ 0.45
SHKBP1-212ENST00000596163 ARHGEF38Q9NXL2 777 aa17.88■□□□□ 0.45
SHKBP1-212ENST00000596163 XPO7Q9UIA9 1087 aaKnown RBP17.88■□□□□ 0.45
SHKBP1-212ENST00000596163 H0Y626 953 aa17.87■□□□□ 0.45
SHKBP1-212ENST00000596163 DDX3XO00571 662 aaKnown RBP eCLIP17.87■□□□□ 0.45
SHKBP1-212ENST00000596163 PAGE1O75459 146 aa17.87■□□□□ 0.45
SHKBP1-212ENST00000596163 FTLP02792 175 aaPredicted RBP17.87■□□□□ 0.45
SHKBP1-212ENST00000596163 MYBL1P10243 752 aa17.87■□□□□ 0.45
SHKBP1-212ENST00000596163 GPD1P21695 349 aa17.87■□□□□ 0.45
SHKBP1-212ENST00000596163 RFC1P35251 1148 aaPredicted RBP17.87■□□□□ 0.45
SHKBP1-212ENST00000596163 FNTBP49356 437 aa17.87■□□□□ 0.45
SHKBP1-212ENST00000596163 OXCT1P55809 520 aa17.87■□□□□ 0.45
SHKBP1-212ENST00000596163 RPS24P62847 133 aaKnown RBP17.87■□□□□ 0.45
SHKBP1-212ENST00000596163 ATP11AP98196 1134 aa17.87■□□□□ 0.45
SHKBP1-212ENST00000596163 CDH18Q13634 790 aa17.87■□□□□ 0.45
SHKBP1-212ENST00000596163 GEN1Q17RS7 908 aa17.87■□□□□ 0.45
SHKBP1-212ENST00000596163 OTUD1Q5VV17 481 aaPredicted RBP17.87■□□□□ 0.45
SHKBP1-212ENST00000596163 WDR59Q6PJI9 974 aa17.87■□□□□ 0.45
SHKBP1-212ENST00000596163 LRRC31Q6UY01 552 aa17.87■□□□□ 0.45
SHKBP1-212ENST00000596163 STRADAQ7RTN6 431 aa17.87■□□□□ 0.45
SHKBP1-212ENST00000596163 WDR5BQ86VZ2 330 aa17.87■□□□□ 0.45
SHKBP1-212ENST00000596163 CARNMT1Q8N4J0 409 aa17.87■□□□□ 0.45
SHKBP1-212ENST00000596163 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.87■□□□□ 0.45
SHKBP1-212ENST00000596163 NKD2Q969F2 451 aaPredicted RBP17.87■□□□□ 0.45
SHKBP1-212ENST00000596163 C1orf74Q96LT6 269 aa17.87■□□□□ 0.45
SHKBP1-212ENST00000596163 PRICKLE1Q96MT3 831 aaPredicted RBP17.87■□□□□ 0.45
SHKBP1-212ENST00000596163 HAPLN3Q96S86 360 aa17.87■□□□□ 0.45
SHKBP1-212ENST00000596163 PPP1R9BQ96SB3 815 aa17.87■□□□□ 0.45
SHKBP1-212ENST00000596163 PRMT1Q99873 361 aaKnown RBP17.87■□□□□ 0.45
SHKBP1-212ENST00000596163 CIPCQ9C0C6 399 aa17.87■□□□□ 0.45
SHKBP1-212ENST00000596163 SIK2Q9H0K1 926 aa17.87■□□□□ 0.45
SHKBP1-212ENST00000596163 ABCB8Q9NUT2 735 aa17.87■□□□□ 0.45
SHKBP1-212ENST00000596163 C2orf42Q9NWW7 574 aa17.87■□□□□ 0.45
SHKBP1-212ENST00000596163 KIAA1522Q9P206 1035 aaPredicted RBP17.87■□□□□ 0.45
SHKBP1-212ENST00000596163 GGA2Q9UJY4 613 aa17.87■□□□□ 0.45
SHKBP1-212ENST00000596163 CLEC4EQ9ULY5 219 aa17.87■□□□□ 0.45
SHKBP1-212ENST00000596163 PLA2G4CQ9UP65 541 aa17.87■□□□□ 0.45
SHKBP1-212ENST00000596163 R4GN57 208 aa17.87■□□□□ 0.45
SHKBP1-212ENST00000596163 SGK1O00141 431 aa17.86■□□□□ 0.45
SHKBP1-212ENST00000596163 LILRB5O75023 590 aa17.86■□□□□ 0.45
SHKBP1-212ENST00000596163 LUC7L3O95232 432 aaKnown RBP17.86■□□□□ 0.45
SHKBP1-212ENST00000596163 MOCS3O95396 460 aa17.86■□□□□ 0.45
SHKBP1-212ENST00000596163 ADCY5O95622 1261 aa17.86■□□□□ 0.45
SHKBP1-212ENST00000596163 ATP5BP06576 529 aaKnown RBP17.86■□□□□ 0.45
SHKBP1-212ENST00000596163 PABPC1P11940 636 aaKnown RBP17.86■□□□□ 0.45
SHKBP1-212ENST00000596163 POLR2EP19388 210 aaKnown RBP17.86■□□□□ 0.45
SHKBP1-212ENST00000596163 TFE3P19532 575 aaPredicted RBP17.86■□□□□ 0.45
SHKBP1-212ENST00000596163 RRM1P23921 792 aa17.86■□□□□ 0.45
SHKBP1-212ENST00000596163 HLA-FP30511 346 aa17.86■□□□□ 0.45
SHKBP1-212ENST00000596163 SGSHP51688 502 aa17.86■□□□□ 0.45
SHKBP1-212ENST00000596163 AUHQ13825 339 aaKnown RBP17.86■□□□□ 0.45
SHKBP1-212ENST00000596163 CCDC14Q49A88 953 aa17.86■□□□□ 0.45
SHKBP1-212ENST00000596163 EGFLAMQ63HQ2 1017 aa17.86■□□□□ 0.45
SHKBP1-212ENST00000596163 HGSNATQ68CP4 663 aa17.86■□□□□ 0.45
SHKBP1-212ENST00000596163 HEATR6Q6AI08 1181 aaKnown RBP17.86■□□□□ 0.45
SHKBP1-212ENST00000596163 FBXL22Q6P050 247 aa17.86■□□□□ 0.45
SHKBP1-212ENST00000596163 CHST9Q7L1S5 443 aa17.86■□□□□ 0.45
SHKBP1-212ENST00000596163 BNIPLQ7Z465 357 aa17.86■□□□□ 0.45
SHKBP1-212ENST00000596163 CFAP52Q8N1V2 620 aa17.86■□□□□ 0.45
SHKBP1-212ENST00000596163 OR8K1Q8NGG5 319 aa17.86■□□□□ 0.45
SHKBP1-212ENST00000596163 JOSD2Q8TAC2 188 aa17.86■□□□□ 0.45
SHKBP1-212ENST00000596163 RPRD1AQ96P16 312 aaPredicted RBP17.86■□□□□ 0.45
SHKBP1-212ENST00000596163 HHIPQ96QV1 700 aa17.86■□□□□ 0.45
SHKBP1-212ENST00000596163 TAS2R14Q9NYV8 317 aa17.86■□□□□ 0.45
SHKBP1-212ENST00000596163 CALCOCO1Q9P1Z2 691 aa17.86■□□□□ 0.45
SHKBP1-212ENST00000596163 THAP10Q9P2Z0 257 aaPredicted RBP17.86■□□□□ 0.45
SHKBP1-212ENST00000596163 EBF1Q9UH73 591 aa17.86■□□□□ 0.45
SHKBP1-212ENST00000596163 ADAMTS1Q9UHI8 967 aa17.86■□□□□ 0.45
SHKBP1-212ENST00000596163 HS3ST4Q9Y661 456 aa17.86■□□□□ 0.45
SHKBP1-212ENST00000596163 CACNA1HO95180 2353 aa17.86■□□□□ 0.45
SHKBP1-212ENST00000596163 A0A1B0GVM2 712 aa17.85■□□□□ 0.45
SHKBP1-212ENST00000596163 TCAF2A6NFQ2 919 aa17.85■□□□□ 0.45
SHKBP1-212ENST00000596163 AXIN1O15169 862 aa17.85■□□□□ 0.45
SHKBP1-212ENST00000596163 HOXB2P14652 356 aa17.85■□□□□ 0.45
SHKBP1-212ENST00000596163 HNRNPH3P31942 346 aaKnown RBP17.85■□□□□ 0.45
SHKBP1-212ENST00000596163 ZNF143P52747 638 aaPredicted RBP17.85■□□□□ 0.45
SHKBP1-212ENST00000596163 SLC12A1Q13621 1099 aa17.85■□□□□ 0.45
SHKBP1-212ENST00000596163 CDO1Q16878 200 aa17.85■□□□□ 0.45
SHKBP1-212ENST00000596163 TRNP1Q6NT89 227 aa17.85■□□□□ 0.45
SHKBP1-212ENST00000596163 KIAA0907Q7Z7F0 614 aaPredicted RBP17.85■□□□□ 0.45
SHKBP1-212ENST00000596163 FAM131BQ86XD5 332 aa17.85■□□□□ 0.45
SHKBP1-212ENST00000596163 CENPIQ92674 756 aaPredicted RBP17.85■□□□□ 0.45
SHKBP1-212ENST00000596163 MCEEQ96PE7 176 aa17.85■□□□□ 0.45
SHKBP1-212ENST00000596163 ISCUQ9H1K1 167 aa17.85■□□□□ 0.45
SHKBP1-212ENST00000596163 MRPL47Q9HD33 250 aaKnown RBP17.85■□□□□ 0.45
SHKBP1-212ENST00000596163 CACNA1IQ9P0X4 2223 aa17.85■□□□□ 0.45
SHKBP1-212ENST00000596163 VANGL2Q9ULK5 521 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms