RNA–Protein interactions for RNA: ENST00000588745.5

SMAD4-205, Transcript of SMAD family member 4, humanhuman

TSL 5 BASIC

Gene SMAD4, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-205ENST00000588745 SPRED2Q7Z698 418 aa11.77□□□□□ -0.53
SMAD4-205ENST00000588745 DNAJB7Q7Z6W7 309 aaPredicted RBP11.77□□□□□ -0.53
SMAD4-205ENST00000588745 TSEN2Q8NCE0 465 aaKnown RBP11.77□□□□□ -0.53
SMAD4-205ENST00000588745 ABHD8Q96I13 439 aa11.77□□□□□ -0.53
SMAD4-205ENST00000588745 BTN2A3PQ96KV6 586 aa11.77□□□□□ -0.53
SMAD4-205ENST00000588745 C1orf74Q96LT6 269 aa11.77□□□□□ -0.53
SMAD4-205ENST00000588745 SAMD11Q96NU1 681 aa11.77□□□□□ -0.53
SMAD4-205ENST00000588745 SIK2Q9H0K1 926 aa11.77□□□□□ -0.53
SMAD4-205ENST00000588745 USP29Q9HBJ7 922 aa11.77□□□□□ -0.53
SMAD4-205ENST00000588745 SLC12A6Q9UHW9 1150 aa11.77□□□□□ -0.53
SMAD4-205ENST00000588745 XPO7Q9UIA9 1087 aaKnown RBP11.77□□□□□ -0.53
SMAD4-205ENST00000588745 DNMT3LQ9UJW3 386 aa11.77□□□□□ -0.53
SMAD4-205ENST00000588745 ANAPC5Q9UJX4 755 aa11.77□□□□□ -0.53
SMAD4-205ENST00000588745 ASB3Q9Y575 518 aa11.77□□□□□ -0.53
SMAD4-205ENST00000588745 ANAPC1Q9H1A4 1944 aa11.76□□□□□ -0.53
SMAD4-205ENST00000588745 GRXCR1A8MXD5 290 aa11.76□□□□□ -0.53
SMAD4-205ENST00000588745 E9PAM4 449 aa11.76□□□□□ -0.53
SMAD4-205ENST00000588745 PPP1R12AO14974 1030 aaPredicted RBP11.76□□□□□ -0.53
SMAD4-205ENST00000588745 LPXNO60711 386 aa11.76□□□□□ -0.53
SMAD4-205ENST00000588745 PPFIA2O75334 1257 aa11.76□□□□□ -0.53
SMAD4-205ENST00000588745 ZNF189O75820 626 aaPredicted RBP11.76□□□□□ -0.53
SMAD4-205ENST00000588745 CSPG5O95196 566 aa11.76□□□□□ -0.53
SMAD4-205ENST00000588745 OAS1P00973 400 aaKnown RBP11.76□□□□□ -0.53
SMAD4-205ENST00000588745 C8AP07357 584 aa11.76□□□□□ -0.53
SMAD4-205ENST00000588745 CA3P07451 260 aa11.76□□□□□ -0.53
SMAD4-205ENST00000588745 HMBSP08397 361 aa11.76□□□□□ -0.53
SMAD4-205ENST00000588745 SPATA31D3P0C874 917 aa11.76□□□□□ -0.53
SMAD4-205ENST00000588745 SRGAP2BP0DMP2 458 aa11.76□□□□□ -0.53
SMAD4-205ENST00000588745 VAV1P15498 845 aa11.76□□□□□ -0.53
SMAD4-205ENST00000588745 RPL22P35268 128 aaKnown RBP11.76□□□□□ -0.53
SMAD4-205ENST00000588745 PRKD1Q15139 912 aaPredicted RBP11.76□□□□□ -0.53
SMAD4-205ENST00000588745 ARTNQ5T4W7 220 aa11.76□□□□□ -0.53
SMAD4-205ENST00000588745 ACBD5Q5T8D3 534 aaPredicted RBP11.76□□□□□ -0.53
SMAD4-205ENST00000588745 HEATR6Q6AI08 1181 aaKnown RBP11.76□□□□□ -0.53
SMAD4-205ENST00000588745 FAM109BQ6ICB4 259 aaPredicted RBP11.76□□□□□ -0.53
SMAD4-205ENST00000588745 RWDD4Q6NW29 188 aaKnown RBP11.76□□□□□ -0.53
SMAD4-205ENST00000588745 SPATA31D4Q6ZUB0 917 aa11.76□□□□□ -0.53
SMAD4-205ENST00000588745 B4GALNT4Q76KP1 1039 aa11.76□□□□□ -0.53
SMAD4-205ENST00000588745 CCDC33Q8N5R6 958 aa11.76□□□□□ -0.53
SMAD4-205ENST00000588745 NPWQ8N729 165 aa11.76□□□□□ -0.53
SMAD4-205ENST00000588745 MRPL43Q8N983 215 aaKnown RBP11.76□□□□□ -0.53
SMAD4-205ENST00000588745 KREMEN2Q8NCW0 462 aa11.76□□□□□ -0.53
SMAD4-205ENST00000588745 TFB1MQ8WVM0 346 aaKnown RBP11.76□□□□□ -0.53
SMAD4-205ENST00000588745 TXLNGYQ9BZA5 131 aa11.76□□□□□ -0.53
SMAD4-205ENST00000588745 NACA2Q9H009 215 aa11.76□□□□□ -0.53
SMAD4-205ENST00000588745 ACBD3Q9H3P7 528 aa11.76□□□□□ -0.53
SMAD4-205ENST00000588745 CATSPERBQ9H7T0 1116 aa11.76□□□□□ -0.53
SMAD4-205ENST00000588745 ZNF334Q9HCZ1 680 aaPredicted RBP11.76□□□□□ -0.53
SMAD4-205ENST00000588745 PAK5Q9P286 719 aa11.76□□□□□ -0.53
SMAD4-205ENST00000588745 TPX2Q9ULW0 747 aaKnown RBP11.76□□□□□ -0.53
SMAD4-205ENST00000588745 SHOC2Q9UQ13 582 aa11.76□□□□□ -0.53
SMAD4-205ENST00000588745 NR2E3Q9Y5X4 410 aa11.76□□□□□ -0.53
SMAD4-205ENST00000588745 CLUHO75153 1309 aa11.75□□□□□ -0.53
SMAD4-205ENST00000588745 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.75□□□□□ -0.53
SMAD4-205ENST00000588745 GRM6O15303 877 aa11.75□□□□□ -0.53
SMAD4-205ENST00000588745 NCAM2O15394 837 aa11.75□□□□□ -0.53
SMAD4-205ENST00000588745 COCHO43405 550 aa11.75□□□□□ -0.53
SMAD4-205ENST00000588745 F11P03951 625 aa11.75□□□□□ -0.53
SMAD4-205ENST00000588745 ACTN2P35609 894 aa11.75□□□□□ -0.53
SMAD4-205ENST00000588745 CLCN4P51793 760 aa11.75□□□□□ -0.53
SMAD4-205ENST00000588745 NRLP54845 237 aa11.75□□□□□ -0.53
SMAD4-205ENST00000588745 MLLT6P55198 1093 aaPredicted RBP11.75□□□□□ -0.53
SMAD4-205ENST00000588745 DHX9Q08211 1270 aaKnown RBP11.75□□□□□ -0.53
SMAD4-205ENST00000588745 MORF4L2Q15014 288 aa11.75□□□□□ -0.53
SMAD4-205ENST00000588745 SHHQ15465 462 aa11.75□□□□□ -0.53
SMAD4-205ENST00000588745 MS4A13Q5J8X5 152 aa11.75□□□□□ -0.53
SMAD4-205ENST00000588745 SPDYCQ5MJ68 293 aa11.75□□□□□ -0.53
SMAD4-205ENST00000588745 RNASEH2BQ5TBB1 312 aaKnown RBP11.75□□□□□ -0.53
SMAD4-205ENST00000588745 PCGF5Q86SE9 256 aa11.75□□□□□ -0.53
SMAD4-205ENST00000588745 C14orf80Q86SX3 495 aa11.75□□□□□ -0.53
SMAD4-205ENST00000588745 TMEM150AQ86TG1 271 aa11.75□□□□□ -0.53
SMAD4-205ENST00000588745 HOOK3Q86VS8 718 aa11.75□□□□□ -0.53
SMAD4-205ENST00000588745 LRRN4Q8WUT4 740 aa11.75□□□□□ -0.53
SMAD4-205ENST00000588745 HTR3CQ8WXA8 447 aa11.75□□□□□ -0.53
SMAD4-205ENST00000588745 PLD4Q96BZ4 506 aa11.75□□□□□ -0.53
SMAD4-205ENST00000588745 TGS1Q96RS0 853 aaKnown RBP11.75□□□□□ -0.53
SMAD4-205ENST00000588745 TSPYL1Q9H0U9 437 aa11.75□□□□□ -0.53
SMAD4-205ENST00000588745 ADAM7Q9H2U9 754 aa11.75□□□□□ -0.53
SMAD4-205ENST00000588745 PRDM12Q9H4Q4 367 aa11.75□□□□□ -0.53
SMAD4-205ENST00000588745 IL21Q9HBE4 155 aa11.75□□□□□ -0.53
SMAD4-205ENST00000588745 FARP1Q9Y4F1 1045 aaPredicted RBP11.75□□□□□ -0.53
SMAD4-205ENST00000588745 PCDHA11Q9Y5I1 949 aa11.75□□□□□ -0.53
SMAD4-205ENST00000588745 C2orf78A6NCI8 922 aa11.74□□□□□ -0.53
SMAD4-205ENST00000588745 WASH4PA8MWX3 477 aa11.74□□□□□ -0.53
SMAD4-205ENST00000588745 C1RP00736 705 aa11.74□□□□□ -0.53
SMAD4-205ENST00000588745 MX2P20592 715 aa11.74□□□□□ -0.53
SMAD4-205ENST00000588745 IRS1P35568 1242 aa11.74□□□□□ -0.53
SMAD4-205ENST00000588745 CHKAP35790 457 aa11.74□□□□□ -0.53
SMAD4-205ENST00000588745 HSD17B3P37058 310 aa11.74□□□□□ -0.53
SMAD4-205ENST00000588745 ERVK-21P61565 698 aa11.74□□□□□ -0.53
SMAD4-205ENST00000588745 GALNT2Q10471 571 aa11.74□□□□□ -0.53
SMAD4-205ENST00000588745 AP1B1Q10567 949 aa11.74□□□□□ -0.53
SMAD4-205ENST00000588745 AUHQ13825 339 aaKnown RBP11.74□□□□□ -0.53
SMAD4-205ENST00000588745 CAMK1Q14012 370 aa11.74□□□□□ -0.53
SMAD4-205ENST00000588745 SLMAPQ14BN4 828 aa11.74□□□□□ -0.53
SMAD4-205ENST00000588745 UAP1Q16222 522 aaPredicted RBP11.74□□□□□ -0.53
SMAD4-205ENST00000588745 PABPC1LQ4VXU2 614 aaKnown RBP11.74□□□□□ -0.53
SMAD4-205ENST00000588745 LRRC31Q6UY01 552 aa11.74□□□□□ -0.53
SMAD4-205ENST00000588745 TMC8Q8IU68 726 aa11.74□□□□□ -0.53
SMAD4-205ENST00000588745 TP53INP2Q8IXH6 220 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 147.2 ms