RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 WFIKKN2Q8TEU8 576 aa15.2■□□□□ 0.02
FANCA-220ENST00000566409 EDEM2Q9BV94 578 aa15.2■□□□□ 0.02
FANCA-220ENST00000566409 ITM2CQ9NQX7 267 aa15.2■□□□□ 0.02
FANCA-220ENST00000566409 TAB2Q9NYJ8 693 aa15.2■□□□□ 0.02
FANCA-220ENST00000566409 STIM2Q9P246 746 aa15.2■□□□□ 0.02
FANCA-220ENST00000566409 USP36Q9P275 1121 aaKnown RBP15.2■□□□□ 0.02
FANCA-220ENST00000566409 INTS6Q9UL03 887 aaKnown RBP15.2■□□□□ 0.02
FANCA-220ENST00000566409 PCDH15Q96QU1 1955 aa15.2■□□□□ 0.02
FANCA-220ENST00000566409 PCNX2A6NKB5 2137 aa15.19■□□□□ 0.02
FANCA-220ENST00000566409 C4orf47A7E2U8 309 aa15.19■□□□□ 0.02
FANCA-220ENST00000566409 KCNU1A8MYU2 1149 aa15.19■□□□□ 0.02
FANCA-220ENST00000566409 ZBTB24O43167 697 aaPredicted RBP15.19■□□□□ 0.02
FANCA-220ENST00000566409 AP5Z1O43299 807 aa15.19■□□□□ 0.02
FANCA-220ENST00000566409 MOCS2O96007 188 aaPredicted RBP15.19■□□□□ 0.02
FANCA-220ENST00000566409 EPHX1P07099 455 aa15.19■□□□□ 0.02
FANCA-220ENST00000566409 GLI1P08151 1106 aa15.19■□□□□ 0.02
FANCA-220ENST00000566409 KRT9P35527 623 aa15.19■□□□□ 0.02
FANCA-220ENST00000566409 KLK7P49862 253 aa15.19■□□□□ 0.02
FANCA-220ENST00000566409 ZNF33AQ06730 810 aa15.19■□□□□ 0.02
FANCA-220ENST00000566409 LMAN2Q12907 356 aa15.19■□□□□ 0.02
FANCA-220ENST00000566409 CAMK2GQ13555 558 aaPredicted RBP15.19■□□□□ 0.02
FANCA-220ENST00000566409 TRIM61Q5EBN2 209 aa15.19■□□□□ 0.02
FANCA-220ENST00000566409 IL31Q6EBC2 164 aa15.19■□□□□ 0.02
FANCA-220ENST00000566409 SERPINA13PQ6UXR4 307 aa15.19■□□□□ 0.02
FANCA-220ENST00000566409 SLC36A4Q6YBV0 504 aa15.19■□□□□ 0.02
FANCA-220ENST00000566409 MMS22LQ6ZRQ5 1243 aa15.19■□□□□ 0.02
FANCA-220ENST00000566409 C11orf57Q6ZUT1 292 aaPredicted RBP15.19■□□□□ 0.02
FANCA-220ENST00000566409 AHI1Q8N157 1196 aa15.19■□□□□ 0.02
FANCA-220ENST00000566409 HJURPQ8NCD3 748 aaPredicted RBP15.19■□□□□ 0.02
FANCA-220ENST00000566409 DDX1Q92499 740 aaKnown RBP15.19■□□□□ 0.02
FANCA-220ENST00000566409 MYO19Q96H55 970 aa15.19■□□□□ 0.02
FANCA-220ENST00000566409 ZNF419Q96HQ0 510 aaPredicted RBP15.19■□□□□ 0.02
FANCA-220ENST00000566409 TRIM62Q9BVG3 475 aa15.19■□□□□ 0.02
FANCA-220ENST00000566409 LSM14BQ9BX40 385 aaKnown RBP15.19■□□□□ 0.02
FANCA-220ENST00000566409 ADAM33Q9BZ11 813 aa15.19■□□□□ 0.02
FANCA-220ENST00000566409 ASNSD1Q9NWL6 643 aa15.19■□□□□ 0.02
FANCA-220ENST00000566409 EVLQ9UI08 416 aaPredicted RBP15.19■□□□□ 0.02
FANCA-220ENST00000566409 SYNCRIPO60506 623 aaKnown RBP15.18■□□□□ 0.02
FANCA-220ENST00000566409 DLDP09622 509 aaKnown RBP15.18■□□□□ 0.02
FANCA-220ENST00000566409 C7P10643 843 aa15.18■□□□□ 0.02
FANCA-220ENST00000566409 UCHL3P15374 230 aa15.18■□□□□ 0.02
FANCA-220ENST00000566409 CYP11B1P15538 503 aa15.18■□□□□ 0.02
FANCA-220ENST00000566409 TACR2P21452 398 aa15.18■□□□□ 0.02
FANCA-220ENST00000566409 CDH5P33151 784 aaPredicted RBP15.18■□□□□ 0.02
FANCA-220ENST00000566409 TPMTP51580 245 aa15.18■□□□□ 0.02
FANCA-220ENST00000566409 RAPGEF1Q13905 1077 aa15.18■□□□□ 0.02
FANCA-220ENST00000566409 KRT31Q15323 416 aa15.18■□□□□ 0.02
FANCA-220ENST00000566409 EFHC1Q5JVL4 640 aa15.18■□□□□ 0.02
FANCA-220ENST00000566409 OTUD1Q5VV17 481 aaPredicted RBP15.18■□□□□ 0.02
FANCA-220ENST00000566409 RAP1GAP2Q684P5 730 aa15.18■□□□□ 0.02
FANCA-220ENST00000566409 OR6B2Q6IFH4 312 aa15.18■□□□□ 0.02
FANCA-220ENST00000566409 SLC23A3Q6PIS1 610 aa15.18■□□□□ 0.02
FANCA-220ENST00000566409 MFN1Q8IWA4 741 aa15.18■□□□□ 0.02
FANCA-220ENST00000566409 GBP4Q96PP9 640 aa15.18■□□□□ 0.02
FANCA-220ENST00000566409 PRMT1Q99873 361 aaKnown RBP15.18■□□□□ 0.02
FANCA-220ENST00000566409 VPS16Q9H269 839 aa15.18■□□□□ 0.02
FANCA-220ENST00000566409 GANQ9H2C0 597 aa15.18■□□□□ 0.02
FANCA-220ENST00000566409 MTG2Q9H4K7 406 aa15.18■□□□□ 0.02
FANCA-220ENST00000566409 FSCN3Q9NQT6 498 aa15.18■□□□□ 0.02
FANCA-220ENST00000566409 FANCLQ9NW38 375 aa15.18■□□□□ 0.02
FANCA-220ENST00000566409 WSB2Q9NYS7 404 aaPredicted RBP15.18■□□□□ 0.02
FANCA-220ENST00000566409 PLA2G4CQ9UP65 541 aa15.18■□□□□ 0.02
FANCA-220ENST00000566409 FAM170AA1A519 330 aa15.17■□□□□ 0.02
FANCA-220ENST00000566409 PES1O00541 588 aaKnown RBP15.17■□□□□ 0.02
FANCA-220ENST00000566409 HSF2BPO75031 334 aa15.17■□□□□ 0.02
FANCA-220ENST00000566409 IGLV3-19P01714 112 aa15.17■□□□□ 0.02
FANCA-220ENST00000566409 CD6P30203 668 aa15.17■□□□□ 0.02
FANCA-220ENST00000566409 SLC6A3Q01959 620 aa15.17■□□□□ 0.02
FANCA-220ENST00000566409 FNDC3BQ53EP0 1204 aaKnown RBP15.17■□□□□ 0.02
FANCA-220ENST00000566409 SLC26A9Q7LBE3 791 aa15.17■□□□□ 0.02
FANCA-220ENST00000566409 NOP9Q86U38 636 aaKnown RBP15.17■□□□□ 0.02
FANCA-220ENST00000566409 CACUL1Q86Y37 369 aa15.17■□□□□ 0.02
FANCA-220ENST00000566409 LGI2Q8N0V4 545 aa15.17■□□□□ 0.02
FANCA-220ENST00000566409 CARNMT1Q8N4J0 409 aa15.17■□□□□ 0.02
FANCA-220ENST00000566409 ZNF397Q8NF99 534 aaPredicted RBP15.17■□□□□ 0.02
FANCA-220ENST00000566409 TTC17Q96AE7 1141 aa15.17■□□□□ 0.02
FANCA-220ENST00000566409 SIPA1Q96FS4 1042 aa15.17■□□□□ 0.02
FANCA-220ENST00000566409 TOE1Q96GM8 510 aaKnown RBP15.17■□□□□ 0.02
FANCA-220ENST00000566409 BTN2A3PQ96KV6 586 aa15.17■□□□□ 0.02
FANCA-220ENST00000566409 MRGPRX3Q96LB0 322 aa15.17■□□□□ 0.02
FANCA-220ENST00000566409 HSPA12BQ96MM6 686 aa15.17■□□□□ 0.02
FANCA-220ENST00000566409 DDX50Q9BQ39 737 aaKnown RBP15.17■□□□□ 0.02
FANCA-220ENST00000566409 STK33Q9BYT3 514 aa15.17■□□□□ 0.02
FANCA-220ENST00000566409 FAM204AQ9H8W3 233 aa15.17■□□□□ 0.02
FANCA-220ENST00000566409 PRSS16Q9NQE7 514 aa15.17■□□□□ 0.02
FANCA-220ENST00000566409 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.17■□□□□ 0.02
FANCA-220ENST00000566409 DDIT4Q9NX09 232 aa15.17■□□□□ 0.02
FANCA-220ENST00000566409 MAP1BP46821 2468 aaKnown RBP15.17■□□□□ 0.02
FANCA-220ENST00000566409 SYNJ2BP-COX16A0A087WUM0 186 aa15.16■□□□□ 0.02
FANCA-220ENST00000566409 F8VZ95 297 aa15.16■□□□□ 0.02
FANCA-220ENST00000566409 I6L893 689 aaPredicted RBP15.16■□□□□ 0.02
FANCA-220ENST00000566409 EPHB6O15197 1021 aa15.16■□□□□ 0.02
FANCA-220ENST00000566409 LUC7L3O95232 432 aaKnown RBP15.16■□□□□ 0.02
FANCA-220ENST00000566409 APOEP02649 317 aa15.16■□□□□ 0.02
FANCA-220ENST00000566409 ADRB1P08588 477 aa15.16■□□□□ 0.02
FANCA-220ENST00000566409 POLR2EP19388 210 aaKnown RBP15.16■□□□□ 0.02
FANCA-220ENST00000566409 TFE3P19532 575 aaPredicted RBP15.16■□□□□ 0.02
FANCA-220ENST00000566409 MAOBP27338 520 aa15.16■□□□□ 0.02
FANCA-220ENST00000566409 CSKP41240 450 aa15.16■□□□□ 0.02
FANCA-220ENST00000566409 CTSOP43234 321 aaPredicted RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms