RNA–Protein interactions for RNA: ENST00000563911.5

HERPUD1-208, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, human

TSL 3

Gene HERPUD1, Length 844 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HERPUD1-208	ENST00000563911	CEP85	Q6P2H3	762 aa		6.64	□□□□□ -1.35
HERPUD1-208	ENST00000563911	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	6.64	□□□□□ -1.35
HERPUD1-208	ENST00000563911	MICU3	Q86XE3	530 aa		6.64	□□□□□ -1.35
HERPUD1-208	ENST00000563911	CFAP52	Q8N1V2	620 aa		6.64	□□□□□ -1.35
HERPUD1-208	ENST00000563911	ENAH	Q8N8S7	591 aa	Predicted RBP	6.64	□□□□□ -1.35
HERPUD1-208	ENST00000563911	NSUN7	Q8NE18	718 aa	Known RBP	6.64	□□□□□ -1.35
HERPUD1-208	ENST00000563911	CHST13	Q8NET6	341 aa		6.64	□□□□□ -1.35
HERPUD1-208	ENST00000563911	KAT2B	Q92831	832 aa		6.64	□□□□□ -1.35
HERPUD1-208	ENST00000563911	DCLRE1C	Q96SD1	692 aa	Known RBP	6.64	□□□□□ -1.35
HERPUD1-208	ENST00000563911	NEU1	Q99519	415 aa		6.64	□□□□□ -1.35
HERPUD1-208	ENST00000563911	SMO	Q99835	787 aa		6.64	□□□□□ -1.35
HERPUD1-208	ENST00000563911	VPS11	Q9H270	941 aa		6.64	□□□□□ -1.35
HERPUD1-208	ENST00000563911	SH2D4A	Q9H788	454 aa		6.64	□□□□□ -1.35
HERPUD1-208	ENST00000563911	ARFGAP3	Q9NP61	516 aa		6.64	□□□□□ -1.35
HERPUD1-208	ENST00000563911	RNF146	Q9NTX7	359 aa		6.64	□□□□□ -1.35
HERPUD1-208	ENST00000563911	CYP39A1	Q9NYL5	469 aa		6.64	□□□□□ -1.35
HERPUD1-208	ENST00000563911	XPR1	Q9UBH6	696 aa		6.64	□□□□□ -1.35
HERPUD1-208	ENST00000563911	PAXBP1	Q9Y5B6	917 aa		6.64	□□□□□ -1.35
HERPUD1-208	ENST00000563911	SLC4A4	Q9Y6R1	1079 aa		6.64	□□□□□ -1.35
HERPUD1-208	ENST00000563911	ABHD14A-ACY1	A0A1B0GW23	586 aa		6.63	□□□□□ -1.35
HERPUD1-208	ENST00000563911	TMEM233	B4DJY2	109 aa		6.63	□□□□□ -1.35
HERPUD1-208	ENST00000563911	TMEM232	C9JQI7	657 aa		6.63	□□□□□ -1.35
HERPUD1-208	ENST00000563911	PYCARD-AS1	I3L0S3	204 aa		6.63	□□□□□ -1.35
HERPUD1-208	ENST00000563911	APOL1	O14791	398 aa		6.63	□□□□□ -1.35
HERPUD1-208	ENST00000563911	DCX	O43602	365 aa		6.63	□□□□□ -1.35
HERPUD1-208	ENST00000563911	EIF3J	O75822	258 aa	Known RBP	6.63	□□□□□ -1.35
HERPUD1-208	ENST00000563911	GJB5	O95377	273 aa		6.63	□□□□□ -1.35
HERPUD1-208	ENST00000563911	AR	P10275	920 aa		6.63	□□□□□ -1.35
HERPUD1-208	ENST00000563911	STK3	Q13188	491 aa		6.63	□□□□□ -1.35
HERPUD1-208	ENST00000563911	HIBCH	Q6NVY1	386 aa	Predicted RBP	6.63	□□□□□ -1.35
HERPUD1-208	ENST00000563911	ZNF585A	Q6P3V2	769 aa		6.63	□□□□□ -1.35
HERPUD1-208	ENST00000563911	FOXR2	Q6PJQ5	311 aa		6.63	□□□□□ -1.35
HERPUD1-208	ENST00000563911	SLC30A10	Q6XR72	485 aa		6.63	□□□□□ -1.35
HERPUD1-208	ENST00000563911	HTR3D	Q70Z44	454 aa		6.63	□□□□□ -1.35
HERPUD1-208	ENST00000563911	SMC5	Q8IY18	1101 aa		6.63	□□□□□ -1.35
HERPUD1-208	ENST00000563911	ATP11C	Q8NB49	1132 aa		6.63	□□□□□ -1.35
HERPUD1-208	ENST00000563911	OR56A1	Q8NGH5	318 aa		6.63	□□□□□ -1.35
HERPUD1-208	ENST00000563911	EDA	Q92838	391 aa		6.63	□□□□□ -1.35
HERPUD1-208	ENST00000563911	SNX22	Q96L94	193 aa		6.63	□□□□□ -1.35
HERPUD1-208	ENST00000563911	WWC2-AS2	Q96NR7	200 aa		6.63	□□□□□ -1.35
HERPUD1-208	ENST00000563911	FTO	Q9C0B1	505 aa	Known RBP eCLIP	6.63	□□□□□ -1.35
HERPUD1-208	ENST00000563911	BOLA2	Q9H3K6	86 aa		6.63	□□□□□ -1.35
HERPUD1-208	ENST00000563911	RNPEP	Q9H4A4	650 aa		6.63	□□□□□ -1.35
HERPUD1-208	ENST00000563911	SERHL	Q9NQF3	203 aa		6.63	□□□□□ -1.35
HERPUD1-208	ENST00000563911	MRPS18A	Q9NVS2	196 aa	Known RBP	6.63	□□□□□ -1.35
HERPUD1-208	ENST00000563911	MTMR4	Q9NYA4	1195 aa		6.63	□□□□□ -1.35
HERPUD1-208	ENST00000563911	ST6GALNAC2	Q9UJ37	374 aa		6.63	□□□□□ -1.35
HERPUD1-208	ENST00000563911	ITGB1BP2	Q9UKP3	347 aa		6.63	□□□□□ -1.35
HERPUD1-208	ENST00000563911	SORCS3	Q9UPU3	1222 aa		6.63	□□□□□ -1.35
HERPUD1-208	ENST00000563911		Q9Y3F1	56 aa		6.63	□□□□□ -1.35
HERPUD1-208	ENST00000563911	TCAF1	Q9Y4C2	921 aa		6.63	□□□□□ -1.35
HERPUD1-208	ENST00000563911	SCN10A	Q9Y5Y9	1956 aa		6.62	□□□□□ -1.35
HERPUD1-208	ENST00000563911		A0A087WWL8	130 aa		6.62	□□□□□ -1.35
HERPUD1-208	ENST00000563911		A0A1B0GTW7	788 aa		6.62	□□□□□ -1.35
HERPUD1-208	ENST00000563911	DIRC3	C9JPN6	131 aa		6.62	□□□□□ -1.35
HERPUD1-208	ENST00000563911		F5H423	210 aa	Predicted RBP	6.62	□□□□□ -1.35
HERPUD1-208	ENST00000563911	ZNF185	O15231	689 aa		6.62	□□□□□ -1.35
HERPUD1-208	ENST00000563911	NMT2	O60551	498 aa		6.62	□□□□□ -1.35
HERPUD1-208	ENST00000563911	RASSF9	O75901	435 aa		6.62	□□□□□ -1.35
HERPUD1-208	ENST00000563911	RECQL4	O94761	1208 aa		6.62	□□□□□ -1.35
HERPUD1-208	ENST00000563911	SCAF4	O95104	1147 aa	Known RBP	6.62	□□□□□ -1.35
HERPUD1-208	ENST00000563911	CXCL10	P02778	98 aa		6.62	□□□□□ -1.35
HERPUD1-208	ENST00000563911	LINC00271	P0C7V0	271 aa		6.62	□□□□□ -1.35
HERPUD1-208	ENST00000563911	ALAD	P13716	330 aa		6.62	□□□□□ -1.35
HERPUD1-208	ENST00000563911	ABCB4	P21439	1286 aa		6.62	□□□□□ -1.35
HERPUD1-208	ENST00000563911	FDXR	P22570	491 aa		6.62	□□□□□ -1.35
HERPUD1-208	ENST00000563911	OAZ1	P54368	228 aa		6.62	□□□□□ -1.35
HERPUD1-208	ENST00000563911	PLP2	Q04941	152 aa		6.62	□□□□□ -1.35
HERPUD1-208	ENST00000563911	BAAT	Q14032	418 aa	Predicted RBP	6.62	□□□□□ -1.35
HERPUD1-208	ENST00000563911	TRIM71	Q2Q1W2	868 aa	Known RBP	6.62	□□□□□ -1.35
HERPUD1-208	ENST00000563911	ARL13B	Q3SXY8	428 aa		6.62	□□□□□ -1.35
HERPUD1-208	ENST00000563911	SBK1	Q52WX2	424 aa		6.62	□□□□□ -1.35
HERPUD1-208	ENST00000563911	TCEAL5	Q5H9L2	206 aa		6.62	□□□□□ -1.35
HERPUD1-208	ENST00000563911	TMED8	Q6PL24	325 aa	Predicted RBP	6.62	□□□□□ -1.35
HERPUD1-208	ENST00000563911	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	6.62	□□□□□ -1.35
HERPUD1-208	ENST00000563911	RNF152	Q8N8N0	203 aa		6.62	□□□□□ -1.35
HERPUD1-208	ENST00000563911	KIAA1191	Q96A73	305 aa		6.62	□□□□□ -1.35
HERPUD1-208	ENST00000563911	IQCD	Q96DY2	449 aa		6.62	□□□□□ -1.35
HERPUD1-208	ENST00000563911	ZC3H10	Q96K80	434 aa	Known RBP	6.62	□□□□□ -1.35
HERPUD1-208	ENST00000563911	TRIB1	Q96RU8	372 aa		6.62	□□□□□ -1.35
HERPUD1-208	ENST00000563911	ZSWIM1	Q9BR11	485 aa		6.62	□□□□□ -1.35
HERPUD1-208	ENST00000563911	MTG1	Q9BT17	334 aa	Predicted RBP	6.62	□□□□□ -1.35
HERPUD1-208	ENST00000563911	SPATA5L1	Q9BVQ7	753 aa		6.62	□□□□□ -1.35
HERPUD1-208	ENST00000563911	WDR11	Q9BZH6	1224 aa		6.62	□□□□□ -1.35
HERPUD1-208	ENST00000563911	MS4A7	Q9GZW8	240 aa	Predicted RBP	6.62	□□□□□ -1.35
HERPUD1-208	ENST00000563911	ACAD9	Q9H845	621 aa		6.62	□□□□□ -1.35
HERPUD1-208	ENST00000563911	CD248	Q9HCU0	757 aa		6.62	□□□□□ -1.35
HERPUD1-208	ENST00000563911	IL17RB	Q9NRM6	502 aa		6.62	□□□□□ -1.35
HERPUD1-208	ENST00000563911	PAG1	Q9NWQ8	432 aa		6.62	□□□□□ -1.35
HERPUD1-208	ENST00000563911	GPRC5B	Q9NZH0	403 aa		6.62	□□□□□ -1.35
HERPUD1-208	ENST00000563911	TRPM5	Q9NZQ8	1165 aa		6.62	□□□□□ -1.35
HERPUD1-208	ENST00000563911	FBXO40	Q9UH90	709 aa		6.62	□□□□□ -1.35
HERPUD1-208	ENST00000563911	MUTYH	Q9UIF7	546 aa		6.62	□□□□□ -1.35
HERPUD1-208	ENST00000563911	FEM1B	Q9UK73	627 aa		6.62	□□□□□ -1.35
HERPUD1-208	ENST00000563911	LRCH1	Q9Y2L9	728 aa		6.62	□□□□□ -1.35
HERPUD1-208	ENST00000563911	CEP83	Q9Y592	693 aa		6.62	□□□□□ -1.35
HERPUD1-208	ENST00000563911	TECTA	O75443	2155 aa		6.62	□□□□□ -1.35
HERPUD1-208	ENST00000563911	MYH8	P13535	1937 aa		6.62	□□□□□ -1.35
HERPUD1-208	ENST00000563911	ZFHX4	Q86UP3	3567 aa		6.62	□□□□□ -1.35
HERPUD1-208	ENST00000563911	LOC102724159	A0A0B4J2E5	919 aa		6.61	□□□□□ -1.35

Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms