RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 MLXIPLQ9NP71 852 aa5.35□□□□□ -1.55
USP8-218ENST00000561330 LIN7CQ9NUP9 197 aaKnown RBP5.35□□□□□ -1.55
USP8-218ENST00000561330 RAB21Q9UL25 225 aa5.35□□□□□ -1.55
USP8-218ENST00000561330 TRPC5Q9UL62 973 aaPredicted RBP5.35□□□□□ -1.55
USP8-218ENST00000561330 PCSK5Q92824 1860 aa5.34□□□□□ -1.55
USP8-218ENST00000561330 SLC22A23A1A5C7 686 aa5.34□□□□□ -1.55
USP8-218ENST00000561330 C3orf70A6NLC5 250 aaPredicted RBP5.34□□□□□ -1.55
USP8-218ENST00000561330 C2CD4BA6NLJ0 364 aa5.34□□□□□ -1.55
USP8-218ENST00000561330 ADAM10O14672 748 aa5.34□□□□□ -1.55
USP8-218ENST00000561330 KAT7O95251 611 aa5.34□□□□□ -1.55
USP8-218ENST00000561330 SGPL1O95470 568 aa5.34□□□□□ -1.55
USP8-218ENST00000561330 CYP3A4P08684 503 aa5.34□□□□□ -1.55
USP8-218ENST00000561330 CTSAP10619 480 aa5.34□□□□□ -1.55
USP8-218ENST00000561330 AKR1A1P14550 325 aa5.34□□□□□ -1.55
USP8-218ENST00000561330 TFEBP19484 476 aa5.34□□□□□ -1.55
USP8-218ENST00000561330 SLC37A1P57057 533 aa5.34□□□□□ -1.55
USP8-218ENST00000561330 FOXL2P58012 376 aa5.34□□□□□ -1.55
USP8-218ENST00000561330 AP2B1P63010 937 aa5.34□□□□□ -1.55
USP8-218ENST00000561330 RNASELQ05823 741 aaKnown RBP5.34□□□□□ -1.55
USP8-218ENST00000561330 PDCD2Q16342 344 aaPredicted RBP5.34□□□□□ -1.55
USP8-218ENST00000561330 SULT6B1Q6IMI4 303 aa5.34□□□□□ -1.55
USP8-218ENST00000561330 NFRKBQ6P4R8 1299 aa5.34□□□□□ -1.55
USP8-218ENST00000561330 CCDC174Q6PII3 467 aa5.34□□□□□ -1.55
USP8-218ENST00000561330 DEF8Q6ZN54 512 aa5.34□□□□□ -1.55
USP8-218ENST00000561330 RHPN2Q8IUC4 686 aa5.34□□□□□ -1.55
USP8-218ENST00000561330 CACNA2D3Q8IZS8 1091 aa5.34□□□□□ -1.55
USP8-218ENST00000561330 PIGOQ8TEQ8 1089 aa5.34□□□□□ -1.55
USP8-218ENST00000561330 SCNM1Q9BWG6 230 aa5.34□□□□□ -1.55
USP8-218ENST00000561330 C1QTNF7Q9BXJ2 289 aa5.34□□□□□ -1.55
USP8-218ENST00000561330 PABPC3Q9H361 631 aaKnown RBP5.34□□□□□ -1.55
USP8-218ENST00000561330 PRDM8Q9NQV8 689 aa5.34□□□□□ -1.55
USP8-218ENST00000561330 TRNAU1APQ9NX07 287 aaKnown RBP5.34□□□□□ -1.55
USP8-218ENST00000561330 RNF7Q9UBF6 113 aa5.34□□□□□ -1.55
USP8-218ENST00000561330 IPO11Q9UI26 975 aaKnown RBP5.34□□□□□ -1.55
USP8-218ENST00000561330 SLC38A8A6NNN8 435 aa5.33□□□□□ -1.56
USP8-218ENST00000561330 TOP3BO95985 862 aaKnown RBP5.33□□□□□ -1.56
USP8-218ENST00000561330 RFPL3SP0C7P2 107 aa5.33□□□□□ -1.56
USP8-218ENST00000561330 PEPDP12955 493 aa5.33□□□□□ -1.56
USP8-218ENST00000561330 HOXD9P28356 352 aaPredicted RBP5.33□□□□□ -1.56
USP8-218ENST00000561330 FAM3BP58499 235 aaPredicted RBP5.33□□□□□ -1.56
USP8-218ENST00000561330 FOXO1Q12778 655 aa5.33□□□□□ -1.56
USP8-218ENST00000561330 PAPD7Q5XG87 772 aaKnown RBP5.33□□□□□ -1.56
USP8-218ENST00000561330 ZNF425Q6IV72 752 aa5.33□□□□□ -1.56
USP8-218ENST00000561330 LIN54Q6MZP7 749 aa5.33□□□□□ -1.56
USP8-218ENST00000561330 TMEM88Q6PEY1 159 aa5.33□□□□□ -1.56
USP8-218ENST00000561330 SHC4Q6S5L8 630 aa5.33□□□□□ -1.56
USP8-218ENST00000561330 RINLQ6ZS11 566 aa5.33□□□□□ -1.56
USP8-218ENST00000561330 C1QL2Q7Z5L3 287 aa5.33□□□□□ -1.56
USP8-218ENST00000561330 ANKRD13BQ86YJ7 626 aa5.33□□□□□ -1.56
USP8-218ENST00000561330 NANOGP1Q8N7R0 232 aa5.33□□□□□ -1.56
USP8-218ENST00000561330 COQ8BQ96D53 544 aa5.33□□□□□ -1.56
USP8-218ENST00000561330 ARPC5LQ9BPX5 153 aa5.33□□□□□ -1.56
USP8-218ENST00000561330 TMEM120AQ9BXJ8 343 aa5.33□□□□□ -1.56
USP8-218ENST00000561330 MAGEH1Q9H213 219 aa5.33□□□□□ -1.56
USP8-218ENST00000561330 SFXN1Q9H9B4 322 aa5.33□□□□□ -1.56
USP8-218ENST00000561330 TMEM184CQ9NVA4 438 aa5.33□□□□□ -1.56
USP8-218ENST00000561330 MTMR4Q9NYA4 1195 aa5.33□□□□□ -1.56
USP8-218ENST00000561330 DAPP1Q9UN19 280 aa5.33□□□□□ -1.56
USP8-218ENST00000561330 hCG_1642624A0A1W2PR95 340 aa5.32□□□□□ -1.56
USP8-218ENST00000561330 MBD3L5A6NJ08 208 aaPredicted RBP5.32□□□□□ -1.56
USP8-218ENST00000561330 INO80B-WBP1J3KQ70 363 aa5.32□□□□□ -1.56
USP8-218ENST00000561330 PPEF2O14830 753 aa5.32□□□□□ -1.56
USP8-218ENST00000561330 TLR2O60603 784 aa5.32□□□□□ -1.56
USP8-218ENST00000561330 CNTN5O94779 1100 aa5.32□□□□□ -1.56
USP8-218ENST00000561330 FGBP02675 491 aa5.32□□□□□ -1.56
USP8-218ENST00000561330 IGFBP2P18065 325 aa5.32□□□□□ -1.56
USP8-218ENST00000561330 TGM2P21980 687 aa5.32□□□□□ -1.56
USP8-218ENST00000561330 CHKAP35790 457 aa5.32□□□□□ -1.56
USP8-218ENST00000561330 CDK7P50613 346 aa5.32□□□□□ -1.56
USP8-218ENST00000561330 PLCD1P51178 756 aa5.32□□□□□ -1.56
USP8-218ENST00000561330 PNLIPRP1P54315 467 aa5.32□□□□□ -1.56
USP8-218ENST00000561330 RABEP1Q15276 862 aa5.32□□□□□ -1.56
USP8-218ENST00000561330 RPS6KA2Q15349 733 aa5.32□□□□□ -1.56
USP8-218ENST00000561330 TBRG1Q3YBR2 411 aa5.32□□□□□ -1.56
USP8-218ENST00000561330 C10orf25Q5T742 122 aa5.32□□□□□ -1.56
USP8-218ENST00000561330 LIPMQ5VYY2 423 aa5.32□□□□□ -1.56
USP8-218ENST00000561330 C11orf87Q6NUJ2 197 aa5.32□□□□□ -1.56
USP8-218ENST00000561330 ZNF474Q6S9Z5 364 aaPredicted RBP5.32□□□□□ -1.56
USP8-218ENST00000561330 ZNF793Q6ZN11 406 aa5.32□□□□□ -1.56
USP8-218ENST00000561330 FAM57BQ71RH2 274 aa5.32□□□□□ -1.56
USP8-218ENST00000561330 ADGRF4Q8IZF3 695 aa5.32□□□□□ -1.56
USP8-218ENST00000561330 C16orf52Q8NHV5 167 aa5.32□□□□□ -1.56
USP8-218ENST00000561330 SCAMP5Q8TAC9 235 aa5.32□□□□□ -1.56
USP8-218ENST00000561330 STT3BQ8TCJ2 826 aa5.32□□□□□ -1.56
USP8-218ENST00000561330 OTUD7AQ8TE49 926 aaPredicted RBP5.32□□□□□ -1.56
USP8-218ENST00000561330 CPT1BQ92523 772 aa5.32□□□□□ -1.56
USP8-218ENST00000561330 C3orf49Q96BT1 292 aa5.32□□□□□ -1.56
USP8-218ENST00000561330 TMEM79Q9BSE2 394 aa5.32□□□□□ -1.56
USP8-218ENST00000561330 ELAC1Q9H777 363 aaKnown RBP5.32□□□□□ -1.56
USP8-218ENST00000561330 MLXIPQ9HAP2 919 aa5.32□□□□□ -1.56
USP8-218ENST00000561330 TMEM45AQ9NWC5 275 aa5.32□□□□□ -1.56
USP8-218ENST00000561330 GRHPRQ9UBQ7 328 aa5.32□□□□□ -1.56
USP8-218ENST00000561330 C19orf53Q9UNZ5 99 aaPredicted RBP5.32□□□□□ -1.56
USP8-218ENST00000561330 ZMYM2Q9UBW7 1377 aa5.31□□□□□ -1.56
USP8-218ENST00000561330 CYP3A7-CYP3A51PA0A087WV96 503 aa5.31□□□□□ -1.56
USP8-218ENST00000561330 CYP19A1P11511 503 aaPredicted RBP5.31□□□□□ -1.56
USP8-218ENST00000561330 CYP3A7P24462 503 aa5.31□□□□□ -1.56
USP8-218ENST00000561330 TRAPPC10P48553 1259 aa5.31□□□□□ -1.56
USP8-218ENST00000561330 SHC2P98077 582 aa5.31□□□□□ -1.56
USP8-218ENST00000561330 TUBB8Q3ZCM7 444 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms