RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 FAM133BQ5BKY9 247 aaKnown RBP9.71□□□□□ -0.86
YBX3-218ENST00000546298 MS4A13Q5J8X5 152 aa9.71□□□□□ -0.86
YBX3-218ENST00000546298 SYPL2Q5VXT5 272 aa9.71□□□□□ -0.86
YBX3-218ENST00000546298 NADSYN1Q6IA69 706 aa9.71□□□□□ -0.86
YBX3-218ENST00000546298 GJB7Q6PEY0 223 aa9.71□□□□□ -0.86
YBX3-218ENST00000546298 TAC4Q86UU9 113 aa9.71□□□□□ -0.86
YBX3-218ENST00000546298 IRF2BP1Q8IU81 584 aa9.71□□□□□ -0.86
YBX3-218ENST00000546298 ATP6V0D2Q8N8Y2 350 aa9.71□□□□□ -0.86
YBX3-218ENST00000546298 KDM1BQ8NB78 822 aa9.71□□□□□ -0.86
YBX3-218ENST00000546298 CYB5D2Q8WUJ1 264 aa9.71□□□□□ -0.86
YBX3-218ENST00000546298 TTC17Q96AE7 1141 aa9.71□□□□□ -0.86
YBX3-218ENST00000546298 PPP1R13BQ96KQ4 1090 aa9.71□□□□□ -0.86
YBX3-218ENST00000546298 BTN2A3PQ96KV6 586 aa9.71□□□□□ -0.86
YBX3-218ENST00000546298 CNTNAP3BQ96NU0 1288 aa9.71□□□□□ -0.86
YBX3-218ENST00000546298 PPP1R9BQ96SB3 815 aa9.71□□□□□ -0.86
YBX3-218ENST00000546298 GPR174Q9BXC1 333 aa9.71□□□□□ -0.86
YBX3-218ENST00000546298 CNTNAP3Q9BZ76 1288 aa9.71□□□□□ -0.86
YBX3-218ENST00000546298 ZDHHC5Q9C0B5 715 aa9.71□□□□□ -0.86
YBX3-218ENST00000546298 NUP62CLQ9H1M0 184 aa9.71□□□□□ -0.86
YBX3-218ENST00000546298 LHX5Q9H2C1 402 aa9.71□□□□□ -0.86
YBX3-218ENST00000546298 TMEM245Q9H330 911 aa9.71□□□□□ -0.86
YBX3-218ENST00000546298 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.71□□□□□ -0.86
YBX3-218ENST00000546298 KIAA1522Q9P206 1035 aaPredicted RBP9.71□□□□□ -0.86
YBX3-218ENST00000546298 DNAJC12Q9UKB3 198 aa9.71□□□□□ -0.86
YBX3-218ENST00000546298 PCDHGC3Q9UN70 934 aa9.71□□□□□ -0.86
YBX3-218ENST00000546298 CEP83Q9Y592 693 aa9.71□□□□□ -0.86
YBX3-218ENST00000546298 HELZP42694 1942 aaKnown RBP9.71□□□□□ -0.86
YBX3-218ENST00000546298 ATXN2Q99700 1313 aaKnown RBP9.71□□□□□ -0.86
YBX3-218ENST00000546298 A0A1B0GTW7 788 aa9.7□□□□□ -0.86
YBX3-218ENST00000546298 BECN2A8MW95 431 aa9.7□□□□□ -0.86
YBX3-218ENST00000546298 H0Y626 953 aa9.7□□□□□ -0.86
YBX3-218ENST00000546298 RNASEH1O60930 286 aaKnown RBP9.7□□□□□ -0.86
YBX3-218ENST00000546298 HSF2BPO75031 334 aa9.7□□□□□ -0.86
YBX3-218ENST00000546298 MOCS2O96007 188 aaPredicted RBP9.7□□□□□ -0.86
YBX3-218ENST00000546298 DNTTP04053 509 aa9.7□□□□□ -0.86
YBX3-218ENST00000546298 HLA-EP13747 358 aa9.7□□□□□ -0.86
YBX3-218ENST00000546298 ABCB4P21439 1286 aa9.7□□□□□ -0.86
YBX3-218ENST00000546298 CD70P32970 193 aa9.7□□□□□ -0.86
YBX3-218ENST00000546298 RDXP35241 583 aaKnown RBP9.7□□□□□ -0.86
YBX3-218ENST00000546298 ANP32AP39687 249 aaKnown RBP9.7□□□□□ -0.86
YBX3-218ENST00000546298 NNMTP40261 264 aa9.7□□□□□ -0.86
YBX3-218ENST00000546298 COPAP53621 1224 aa9.7□□□□□ -0.86
YBX3-218ENST00000546298 OXCT1P55809 520 aa9.7□□□□□ -0.86
YBX3-218ENST00000546298 RPS24P62847 133 aaKnown RBP9.7□□□□□ -0.86
YBX3-218ENST00000546298 ZNF252P-AS1Q0IIN9 211 aa9.7□□□□□ -0.86
YBX3-218ENST00000546298 SLC14A1Q13336 389 aa9.7□□□□□ -0.86
YBX3-218ENST00000546298 PTPRNQ16849 979 aa9.7□□□□□ -0.86
YBX3-218ENST00000546298 VWA3BQ502W6 1294 aa9.7□□□□□ -0.86
YBX3-218ENST00000546298 DCAF6Q58WW2 860 aa9.7□□□□□ -0.86
YBX3-218ENST00000546298 ZC3H12AQ5D1E8 599 aaKnown RBP9.7□□□□□ -0.86
YBX3-218ENST00000546298 ZNF776Q68DI1 518 aaPredicted RBP9.7□□□□□ -0.86
YBX3-218ENST00000546298 C11orf57Q6ZUT1 292 aaPredicted RBP9.7□□□□□ -0.86
YBX3-218ENST00000546298 CHSY1Q86X52 802 aa9.7□□□□□ -0.86
YBX3-218ENST00000546298 LGI2Q8N0V4 545 aa9.7□□□□□ -0.86
YBX3-218ENST00000546298 CARNMT1Q8N4J0 409 aa9.7□□□□□ -0.86
YBX3-218ENST00000546298 MINDY1Q8N5J2 469 aa9.7□□□□□ -0.86
YBX3-218ENST00000546298 ADAM32Q8TC27 787 aa9.7□□□□□ -0.86
YBX3-218ENST00000546298 DNASE2BQ8WZ79 361 aa9.7□□□□□ -0.86
YBX3-218ENST00000546298 RNF34Q969K3 372 aa9.7□□□□□ -0.86
YBX3-218ENST00000546298 TUBGCP2Q9BSJ2 902 aa9.7□□□□□ -0.86
YBX3-218ENST00000546298 PDCL3Q9H2J4 239 aa9.7□□□□□ -0.86
YBX3-218ENST00000546298 NDST4Q9H3R1 872 aa9.7□□□□□ -0.86
YBX3-218ENST00000546298 SYNCQ9H7C4 482 aa9.7□□□□□ -0.86
YBX3-218ENST00000546298 FAM204AQ9H8W3 233 aa9.7□□□□□ -0.86
YBX3-218ENST00000546298 ACP6Q9NPH0 428 aa9.7□□□□□ -0.86
YBX3-218ENST00000546298 PRSS16Q9NQE7 514 aa9.7□□□□□ -0.86
YBX3-218ENST00000546298 TMEM51Q9NW97 253 aa9.7□□□□□ -0.86
YBX3-218ENST00000546298 CYTH4Q9UIA0 394 aa9.7□□□□□ -0.86
YBX3-218ENST00000546298 SCML1Q9UN30 329 aa9.7□□□□□ -0.86
YBX3-218ENST00000546298 NCKAP1Q9Y2A7 1128 aa9.7□□□□□ -0.86
YBX3-218ENST00000546298 ABCA7Q8IZY2 2146 aa9.7□□□□□ -0.86
YBX3-218ENST00000546298 KCNU1A8MYU2 1149 aa9.69□□□□□ -0.86
YBX3-218ENST00000546298 F5H5T6 163 aa9.69□□□□□ -0.86
YBX3-218ENST00000546298 FOXN3O00409 490 aaPredicted RBP9.69□□□□□ -0.86
YBX3-218ENST00000546298 PES1O00541 588 aaKnown RBP9.69□□□□□ -0.86
YBX3-218ENST00000546298 GIPC1O14908 333 aa9.69□□□□□ -0.86
YBX3-218ENST00000546298 LUC7L3O95232 432 aaKnown RBP9.69□□□□□ -0.86
YBX3-218ENST00000546298 SRPRAP08240 638 aaKnown RBP9.69□□□□□ -0.86
YBX3-218ENST00000546298 C7P10643 843 aa9.69□□□□□ -0.86
YBX3-218ENST00000546298 TACR2P21452 398 aa9.69□□□□□ -0.86
YBX3-218ENST00000546298 MAOBP27338 520 aa9.69□□□□□ -0.86
YBX3-218ENST00000546298 CCR1P32246 355 aa9.69□□□□□ -0.86
YBX3-218ENST00000546298 SGSHP51688 502 aa9.69□□□□□ -0.86
YBX3-218ENST00000546298 SULT2A1Q06520 285 aa9.69□□□□□ -0.86
YBX3-218ENST00000546298 SEMA3BQ13214 749 aa9.69□□□□□ -0.86
YBX3-218ENST00000546298 SLC12A1Q13621 1099 aa9.69□□□□□ -0.86
YBX3-218ENST00000546298 HNRNPA1L2Q32P51 320 aaKnown RBP9.69□□□□□ -0.86
YBX3-218ENST00000546298 RABGAP1LQ5R372 815 aa9.69□□□□□ -0.86
YBX3-218ENST00000546298 TTC39BQ5VTQ0 682 aaPredicted RBP9.69□□□□□ -0.86
YBX3-218ENST00000546298 DCAF12L1Q5VU92 463 aa9.69□□□□□ -0.86
YBX3-218ENST00000546298 RNF219Q5W0B1 726 aaPredicted RBP9.69□□□□□ -0.86
YBX3-218ENST00000546298 OR6B2Q6IFH4 312 aa9.69□□□□□ -0.86
YBX3-218ENST00000546298 IL27RAQ6UWB1 636 aa9.69□□□□□ -0.86
YBX3-218ENST00000546298 ZDHHC17Q8IUH5 632 aa9.69□□□□□ -0.86
YBX3-218ENST00000546298 DEFB106AQ8N104 65 aa9.69□□□□□ -0.86
YBX3-218ENST00000546298 WDTC1Q8N5D0 677 aa9.69□□□□□ -0.86
YBX3-218ENST00000546298 DEFB124Q8NES8 71 aa9.69□□□□□ -0.86
YBX3-218ENST00000546298 LMLNQ96KR4 655 aa9.69□□□□□ -0.86
YBX3-218ENST00000546298 PRICKLE1Q96MT3 831 aaPredicted RBP9.69□□□□□ -0.86
YBX3-218ENST00000546298 SLC2A13Q96QE2 648 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms