RNA–Protein interactions for RNA: ENST00000545026.1

LEMD3-206, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-206ENST00000545026 SLC29A4Q7RTT9 530 aa7.05□□□□□ -1.28
LEMD3-206ENST00000545026 TSPYL6Q8N831 410 aa7.05□□□□□ -1.28
LEMD3-206ENST00000545026 ANKRD44Q8N8A2 993 aa7.05□□□□□ -1.28
LEMD3-206ENST00000545026 ST8SIA4Q92187 359 aa7.05□□□□□ -1.28
LEMD3-206ENST00000545026 STAMQ92783 540 aa7.05□□□□□ -1.28
LEMD3-206ENST00000545026 PPP1R10Q96QC0 940 aaKnown RBP7.05□□□□□ -1.28
LEMD3-206ENST00000545026 MTMR4Q9NYA4 1195 aa7.05□□□□□ -1.28
LEMD3-206ENST00000545026 TFCP2L1Q9NZI6 479 aa7.05□□□□□ -1.28
LEMD3-206ENST00000545026 TCRBV5S1A1TA0A578 114 aa7.04□□□□□ -1.28
LEMD3-206ENST00000545026 KRT9P35527 623 aa7.04□□□□□ -1.28
LEMD3-206ENST00000545026 STAT6P42226 847 aa7.04□□□□□ -1.28
LEMD3-206ENST00000545026 HOXA4Q00056 320 aaPredicted RBP7.04□□□□□ -1.28
LEMD3-206ENST00000545026 CDK18Q07002 472 aa7.04□□□□□ -1.28
LEMD3-206ENST00000545026 CNGA3Q16281 694 aa7.04□□□□□ -1.28
LEMD3-206ENST00000545026 ERCC6LQ2NKX8 1250 aa7.04□□□□□ -1.28
LEMD3-206ENST00000545026 FAM153CQ494X1 144 aa7.04□□□□□ -1.28
LEMD3-206ENST00000545026 TSTD2Q5T7W7 516 aa7.04□□□□□ -1.28
LEMD3-206ENST00000545026 DENND1BQ6P3S1 775 aa7.04□□□□□ -1.28
LEMD3-206ENST00000545026 GRASPQ7Z6J2 395 aaPredicted RBP7.04□□□□□ -1.28
LEMD3-206ENST00000545026 SRFBP1Q8NEF9 429 aaKnown RBP7.04□□□□□ -1.28
LEMD3-206ENST00000545026 REPS1Q96D71 796 aa7.04□□□□□ -1.28
LEMD3-206ENST00000545026 CLPBQ9H078 707 aa7.04□□□□□ -1.28
LEMD3-206ENST00000545026 SLC22A11Q9NSA0 550 aa7.04□□□□□ -1.28
LEMD3-206ENST00000545026 HSF4Q9ULV5 492 aa7.04□□□□□ -1.28
LEMD3-206ENST00000545026 TBX20Q9UMR3 447 aa7.04□□□□□ -1.28
LEMD3-206ENST00000545026 MYRFQ9Y2G1 1151 aa7.04□□□□□ -1.28
LEMD3-206ENST00000545026 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.03□□□□□ -1.28
LEMD3-206ENST00000545026 C16orf96A6NNT2 1141 aa7.03□□□□□ -1.28
LEMD3-206ENST00000545026 KRTAP9-7A8MTY7 169 aa7.03□□□□□ -1.28
LEMD3-206ENST00000545026 TTC34A8MYJ7 566 aa7.03□□□□□ -1.28
LEMD3-206ENST00000545026 B4E171 279 aa7.03□□□□□ -1.28
LEMD3-206ENST00000545026 DHX16O60231 1041 aaKnown RBP7.03□□□□□ -1.28
LEMD3-206ENST00000545026 INSRRP14616 1297 aa7.03□□□□□ -1.28
LEMD3-206ENST00000545026 HOXD12P35452 270 aa7.03□□□□□ -1.28
LEMD3-206ENST00000545026 TSPAN7P41732 249 aa7.03□□□□□ -1.28
LEMD3-206ENST00000545026 SLC37A1P57057 533 aa7.03□□□□□ -1.28
LEMD3-206ENST00000545026 ABHD18Q0P651 414 aa7.03□□□□□ -1.28
LEMD3-206ENST00000545026 LCE4AQ5TA78 99 aa7.03□□□□□ -1.28
LEMD3-206ENST00000545026 CEP85Q6P2H3 762 aa7.03□□□□□ -1.28
LEMD3-206ENST00000545026 TMEM88Q6PEY1 159 aa7.03□□□□□ -1.28
LEMD3-206ENST00000545026 TRIM72Q6ZMU5 477 aa7.03□□□□□ -1.28
LEMD3-206ENST00000545026 DCDC5Q6ZRR9 648 aa7.03□□□□□ -1.28
LEMD3-206ENST00000545026 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.03□□□□□ -1.28
LEMD3-206ENST00000545026 DAZAP1Q96EP5 407 aaKnown RBP7.03□□□□□ -1.28
LEMD3-206ENST00000545026 MASTLQ96GX5 879 aa7.03□□□□□ -1.28
LEMD3-206ENST00000545026 HS6ST2Q96MM7 605 aa7.03□□□□□ -1.28
LEMD3-206ENST00000545026 SENP7Q9BQF6 1050 aa7.03□□□□□ -1.28
LEMD3-206ENST00000545026 HTATIP2Q9BUP3 242 aa7.03□□□□□ -1.28
LEMD3-206ENST00000545026 PHF7Q9BWX1 381 aaPredicted RBP7.03□□□□□ -1.28
LEMD3-206ENST00000545026 PAIP1Q9H074 479 aaKnown RBP7.03□□□□□ -1.28
LEMD3-206ENST00000545026 IL21RQ9HBE5 538 aa7.03□□□□□ -1.28
LEMD3-206ENST00000545026 TLR8Q9NR97 1041 aaKnown RBP7.03□□□□□ -1.28
LEMD3-206ENST00000545026 ADAM21Q9UKJ8 722 aa7.03□□□□□ -1.28
LEMD3-206ENST00000545026 GDAQ9Y2T3 454 aa7.03□□□□□ -1.28
LEMD3-206ENST00000545026 TMEM191CA6NGB0 347 aa7.02□□□□□ -1.29
LEMD3-206ENST00000545026 H7C1Q1 480 aa7.02□□□□□ -1.29
LEMD3-206ENST00000545026 PEX12O00623 359 aa7.02□□□□□ -1.29
LEMD3-206ENST00000545026 HNRNPCP07910 306 aaKnown RBP eCLIP7.02□□□□□ -1.29
LEMD3-206ENST00000545026 SLC3A2P08195 630 aaKnown RBP7.02□□□□□ -1.29
LEMD3-206ENST00000545026 LYL1P12980 280 aa7.02□□□□□ -1.29
LEMD3-206ENST00000545026 TNNT1P13805 278 aa7.02□□□□□ -1.29
LEMD3-206ENST00000545026 PSMC2P35998 433 aaKnown RBP7.02□□□□□ -1.29
LEMD3-206ENST00000545026 RXRGP48443 463 aa7.02□□□□□ -1.29
LEMD3-206ENST00000545026 ZNF84P51523 738 aa7.02□□□□□ -1.29
LEMD3-206ENST00000545026 KCNB1Q14721 858 aa7.02□□□□□ -1.29
LEMD3-206ENST00000545026 LARS2Q15031 903 aaKnown RBP7.02□□□□□ -1.29
LEMD3-206ENST00000545026 LIPMQ5VYY2 423 aa7.02□□□□□ -1.29
LEMD3-206ENST00000545026 FAM180BQ6P0A1 224 aa7.02□□□□□ -1.29
LEMD3-206ENST00000545026 C1orf122Q6ZSJ8 110 aa7.02□□□□□ -1.29
LEMD3-206ENST00000545026 ADGRF3Q8IZF5 1079 aa7.02□□□□□ -1.29
LEMD3-206ENST00000545026 GALNT4Q8N4A0 578 aa7.02□□□□□ -1.29
LEMD3-206ENST00000545026 TCP11L2Q8N4U5 519 aa7.02□□□□□ -1.29
LEMD3-206ENST00000545026 NEU4Q8WWR8 484 aaPredicted RBP7.02□□□□□ -1.29
LEMD3-206ENST00000545026 ZNF845Q96IR2 970 aaPredicted RBP7.02□□□□□ -1.29
LEMD3-206ENST00000545026 GPR78Q96P69 363 aa7.02□□□□□ -1.29
LEMD3-206ENST00000545026 TIMP4Q99727 224 aa7.02□□□□□ -1.29
LEMD3-206ENST00000545026 PRRX2Q99811 253 aa7.02□□□□□ -1.29
LEMD3-206ENST00000545026 PREBQ9HCU5 417 aa7.02□□□□□ -1.29
LEMD3-206ENST00000545026 IL17RBQ9NRM6 502 aa7.02□□□□□ -1.29
LEMD3-206ENST00000545026 SMC4Q9NTJ3 1288 aa7.02□□□□□ -1.29
LEMD3-206ENST00000545026 MAP3K20Q9NYL2 800 aaKnown RBP7.02□□□□□ -1.29
LEMD3-206ENST00000545026 PACSIN3Q9UKS6 424 aa7.02□□□□□ -1.29
LEMD3-206ENST00000545026 NPIPB13A6NJU9 1138 aa7.01□□□□□ -1.29
LEMD3-206ENST00000545026 NPIPB5A8MRT5 1133 aa7.01□□□□□ -1.29
LEMD3-206ENST00000545026 HMGB1P1B2RPK0 211 aaPredicted RBP7.01□□□□□ -1.29
LEMD3-206ENST00000545026 NPIPB4C9JG80 1138 aa7.01□□□□□ -1.29
LEMD3-206ENST00000545026 FOXN1O15353 648 aa7.01□□□□□ -1.29
LEMD3-206ENST00000545026 TBX18O95935 607 aa7.01□□□□□ -1.29
LEMD3-206ENST00000545026 IFIT1P09914 478 aaKnown RBP7.01□□□□□ -1.29
LEMD3-206ENST00000545026 CYP2D6P10635 497 aa7.01□□□□□ -1.29
LEMD3-206ENST00000545026 TNFRSF1AP19438 455 aa7.01□□□□□ -1.29
LEMD3-206ENST00000545026 PRPH2P23942 346 aa7.01□□□□□ -1.29
LEMD3-206ENST00000545026 AVPR2P30518 371 aa7.01□□□□□ -1.29
LEMD3-206ENST00000545026 PGM1P36871 562 aa7.01□□□□□ -1.29
LEMD3-206ENST00000545026 SHC2P98077 582 aa7.01□□□□□ -1.29
LEMD3-206ENST00000545026 PUM1Q14671 1186 aaKnown RBP eCLIP7.01□□□□□ -1.29
LEMD3-206ENST00000545026 BAK1Q16611 211 aa7.01□□□□□ -1.29
LEMD3-206ENST00000545026 HYIQ5T013 277 aa7.01□□□□□ -1.29
LEMD3-206ENST00000545026 FAAH2Q6GMR7 532 aa7.01□□□□□ -1.29
LEMD3-206ENST00000545026 TMEM65Q6PI78 240 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms