RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 PIK3R2O00459 728 aa12.37□□□□□ -0.43
GABPB1-206ENST00000543881 MSI1O43347 362 aaKnown RBP12.37□□□□□ -0.43
GABPB1-206ENST00000543881 PRB1P04280 392 aa12.37□□□□□ -0.43
GABPB1-206ENST00000543881 LCP1P13796 627 aa12.37□□□□□ -0.43
GABPB1-206ENST00000543881 BRD2P25440 801 aaKnown RBP12.37□□□□□ -0.43
GABPB1-206ENST00000543881 OXTRP30559 389 aa12.37□□□□□ -0.43
GABPB1-206ENST00000543881 PPP1R2P41236 205 aa12.37□□□□□ -0.43
GABPB1-206ENST00000543881 IL12RB1P42701 662 aa12.37□□□□□ -0.43
GABPB1-206ENST00000543881 DAOAP59103 153 aa12.37□□□□□ -0.43
GABPB1-206ENST00000543881 C19orf57Q0VDD7 668 aa12.37□□□□□ -0.43
GABPB1-206ENST00000543881 ENPP2Q13822 863 aa12.37□□□□□ -0.43
GABPB1-206ENST00000543881 TMEM215Q68D42 235 aa12.37□□□□□ -0.43
GABPB1-206ENST00000543881 FOXR2Q6PJQ5 311 aa12.37□□□□□ -0.43
GABPB1-206ENST00000543881 RRAGAQ7L523 313 aa12.37□□□□□ -0.43
GABPB1-206ENST00000543881 TMPRSS6Q8IU80 811 aa12.37□□□□□ -0.43
GABPB1-206ENST00000543881 TRIM59Q8IWR1 403 aa12.37□□□□□ -0.43
GABPB1-206ENST00000543881 SCML4Q8N228 414 aa12.37□□□□□ -0.43
GABPB1-206ENST00000543881 PDCD7Q8N8D1 485 aaKnown RBP12.37□□□□□ -0.43
GABPB1-206ENST00000543881 CLEC4CQ8WTT0 213 aa12.37□□□□□ -0.43
GABPB1-206ENST00000543881 PLD4Q96BZ4 506 aa12.37□□□□□ -0.43
GABPB1-206ENST00000543881 SIPA1Q96FS4 1042 aa12.37□□□□□ -0.43
GABPB1-206ENST00000543881 KREMEN1Q96MU8 473 aa12.37□□□□□ -0.43
GABPB1-206ENST00000543881 UBL7Q96S82 380 aaPredicted RBP12.37□□□□□ -0.43
GABPB1-206ENST00000543881 OLA1Q9NTK5 396 aaKnown RBP12.37□□□□□ -0.43
GABPB1-206ENST00000543881 BTBD3Q9Y2F9 522 aa12.37□□□□□ -0.43
GABPB1-206ENST00000543881 HELZ2Q9BYK8 2649 aaKnown RBP12.36□□□□□ -0.43
GABPB1-206ENST00000543881 TMEM131Q92545 1883 aa12.36□□□□□ -0.43
GABPB1-206ENST00000543881 P4HA2O15460 535 aa12.36□□□□□ -0.43
GABPB1-206ENST00000543881 TNFSF14O43557 240 aa12.36□□□□□ -0.43
GABPB1-206ENST00000543881 TSPAN3O60637 253 aa12.36□□□□□ -0.43
GABPB1-206ENST00000543881 HOXD9P28356 352 aaPredicted RBP12.36□□□□□ -0.43
GABPB1-206ENST00000543881 ABCG1P45844 678 aa12.36□□□□□ -0.43
GABPB1-206ENST00000543881 CSNK1EP49674 416 aaKnown RBP12.36□□□□□ -0.43
GABPB1-206ENST00000543881 ZNF132P52740 706 aa12.36□□□□□ -0.43
GABPB1-206ENST00000543881 KCNH2Q12809 1159 aa12.36□□□□□ -0.43
GABPB1-206ENST00000543881 SUZ12Q15022 739 aaKnown RBP12.36□□□□□ -0.43
GABPB1-206ENST00000543881 CNGA2Q16280 664 aa12.36□□□□□ -0.43
GABPB1-206ENST00000543881 SIX6OS1Q8N1H7 587 aa12.36□□□□□ -0.43
GABPB1-206ENST00000543881 EHBP1Q8NDI1 1231 aa12.36□□□□□ -0.43
GABPB1-206ENST00000543881 C1orf216Q8TAB5 229 aa12.36□□□□□ -0.43
GABPB1-206ENST00000543881 DDI1Q8WTU0 396 aa12.36□□□□□ -0.43
GABPB1-206ENST00000543881 RNF139Q8WU17 664 aa12.36□□□□□ -0.43
GABPB1-206ENST00000543881 SORCS1Q8WY21 1168 aa12.36□□□□□ -0.43
GABPB1-206ENST00000543881 PRCCQ92733 491 aaPredicted RBP12.36□□□□□ -0.43
GABPB1-206ENST00000543881 DCBLD2Q96PD2 775 aa12.36□□□□□ -0.43
GABPB1-206ENST00000543881 NUP58Q9BVL2 599 aa12.36□□□□□ -0.43
GABPB1-206ENST00000543881 CNGB3Q9NQW8 809 aa12.36□□□□□ -0.43
GABPB1-206ENST00000543881 ABCC13Q9NSE7 274 aa12.36□□□□□ -0.43
GABPB1-206ENST00000543881 THAP10Q9P2Z0 257 aaPredicted RBP12.36□□□□□ -0.43
GABPB1-206ENST00000543881 HBS1LQ9Y450 684 aaKnown RBP12.36□□□□□ -0.43
GABPB1-206ENST00000543881 FLNBO75369 2602 aaKnown RBP12.36□□□□□ -0.43
GABPB1-206ENST00000543881 CABIN1Q9Y6J0 2220 aa12.35□□□□□ -0.43
GABPB1-206ENST00000543881 KNL1Q8NG31 2342 aa12.35□□□□□ -0.43
GABPB1-206ENST00000543881 BICDL2A1A5D9 508 aa12.35□□□□□ -0.43
GABPB1-206ENST00000543881 M0QYV0 167 aa12.35□□□□□ -0.43
GABPB1-206ENST00000543881 NPC1O15118 1278 aa12.35□□□□□ -0.43
GABPB1-206ENST00000543881 SYNCRIPO60506 623 aaKnown RBP12.35□□□□□ -0.43
GABPB1-206ENST00000543881 IGLV3-19P01714 112 aa12.35□□□□□ -0.43
GABPB1-206ENST00000543881 CYBBP04839 570 aa12.35□□□□□ -0.43
GABPB1-206ENST00000543881 ACADMP11310 421 aa12.35□□□□□ -0.43
GABPB1-206ENST00000543881 SGSHP51688 502 aa12.35□□□□□ -0.43
GABPB1-206ENST00000543881 AFF3P51826 1226 aaKnown RBP12.35□□□□□ -0.43
GABPB1-206ENST00000543881 MARSP56192 900 aaKnown RBP12.35□□□□□ -0.43
GABPB1-206ENST00000543881 SMAD1Q15797 465 aaKnown RBP12.35□□□□□ -0.43
GABPB1-206ENST00000543881 CCDC157Q569K6 752 aa12.35□□□□□ -0.43
GABPB1-206ENST00000543881 MSANTD2Q6P1R3 559 aa12.35□□□□□ -0.43
GABPB1-206ENST00000543881 ANKS1BQ7Z6G8 1248 aa12.35□□□□□ -0.43
GABPB1-206ENST00000543881 PIP4K2CQ8TBX8 421 aa12.35□□□□□ -0.43
GABPB1-206ENST00000543881 SRRTQ9BXP5 876 aaKnown RBP12.35□□□□□ -0.43
GABPB1-206ENST00000543881 ELOVL2Q9NXB9 296 aa12.35□□□□□ -0.43
GABPB1-206ENST00000543881 STOML2Q9UJZ1 356 aa12.35□□□□□ -0.43
GABPB1-206ENST00000543881 IGLV3-27P01718 113 aa12.34□□□□□ -0.43
GABPB1-206ENST00000543881 FYNP06241 537 aa12.34□□□□□ -0.43
GABPB1-206ENST00000543881 PRKCHP24723 683 aa12.34□□□□□ -0.43
GABPB1-206ENST00000543881 HARS2P49590 506 aaKnown RBP12.34□□□□□ -0.43
GABPB1-206ENST00000543881 COPAP53621 1224 aa12.34□□□□□ -0.43
GABPB1-206ENST00000543881 GCNT1Q02742 428 aa12.34□□□□□ -0.43
GABPB1-206ENST00000543881 PAK1Q13153 545 aa12.34□□□□□ -0.43
GABPB1-206ENST00000543881 ZNF234Q14588 700 aa12.34□□□□□ -0.43
GABPB1-206ENST00000543881 PTPRNQ16849 979 aa12.34□□□□□ -0.43
GABPB1-206ENST00000543881 KIF19Q2TAC6 998 aa12.34□□□□□ -0.43
GABPB1-206ENST00000543881 MPPE1Q53F39 396 aa12.34□□□□□ -0.43
GABPB1-206ENST00000543881 FAM124AQ86V42 546 aa12.34□□□□□ -0.43
GABPB1-206ENST00000543881 CACUL1Q86Y37 369 aa12.34□□□□□ -0.43
GABPB1-206ENST00000543881 UCMAQ8WVF2 138 aa12.34□□□□□ -0.43
GABPB1-206ENST00000543881 IRGQQ8WZA9 623 aa12.34□□□□□ -0.43
GABPB1-206ENST00000543881 SLC39A7Q92504 469 aa12.34□□□□□ -0.43
GABPB1-206ENST00000543881 SNX19Q92543 992 aa12.34□□□□□ -0.43
GABPB1-206ENST00000543881 MED15Q96RN5 788 aa12.34□□□□□ -0.43
GABPB1-206ENST00000543881 SLC2A11Q9BYW1 496 aa12.34□□□□□ -0.43
GABPB1-206ENST00000543881 INTS2Q9H0H0 1204 aaKnown RBP12.34□□□□□ -0.43
GABPB1-206ENST00000543881 ASH1LQ9NR48 2969 aaKnown RBP12.34□□□□□ -0.43
GABPB1-206ENST00000543881 CNTN6Q9UQ52 1028 aa12.34□□□□□ -0.43
GABPB1-206ENST00000543881 SNX11Q9Y5W9 270 aa12.34□□□□□ -0.43
GABPB1-206ENST00000543881 SLCO1B1Q9Y6L6 691 aa12.34□□□□□ -0.43
GABPB1-206ENST00000543881 CKAP5Q14008 2032 aa12.34□□□□□ -0.43
GABPB1-206ENST00000543881 GOLGA6L7A0A1B0GV03 622 aa12.34□□□□□ -0.43
GABPB1-206ENST00000543881 TK2O00142 265 aa12.34□□□□□ -0.43
GABPB1-206ENST00000543881 C1QL1O75973 258 aa12.34□□□□□ -0.43
GABPB1-206ENST00000543881 GNA14O95837 355 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms