RNA–Protein interactions for RNA: ENST00000524126.5

SPIDR-224, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 1 (best)

Gene SPIDR, Length 2,614 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-224ENST00000524126 SLITRK1Q96PX8 696 aa10.46□□□□□ -0.74
SPIDR-224ENST00000524126 CIB1Q99828 191 aa10.46□□□□□ -0.74
SPIDR-224ENST00000524126 TP63Q9H3D4 680 aaPredicted RBP10.46□□□□□ -0.74
SPIDR-224ENST00000524126 PCDH9Q9HC56 1237 aa10.46□□□□□ -0.74
SPIDR-224ENST00000524126 DNMT3BQ9UBC3 853 aaKnown RBP10.46□□□□□ -0.74
SPIDR-224ENST00000524126 BCAP29Q9UHQ4 241 aa10.46□□□□□ -0.74
SPIDR-224ENST00000524126 ZNF536O15090 1300 aa10.46□□□□□ -0.74
SPIDR-224ENST00000524126 RGPD3A6NKT7 1758 aaPredicted RBP10.45□□□□□ -0.74
SPIDR-224ENST00000524126 RGPD4Q7Z3J3 1758 aa10.45□□□□□ -0.74
SPIDR-224ENST00000524126 A0A087WXM4 84 aa10.45□□□□□ -0.74
SPIDR-224ENST00000524126 JRKO75564 520 aa10.45□□□□□ -0.74
SPIDR-224ENST00000524126 ATP5BP06576 529 aaKnown RBP10.45□□□□□ -0.74
SPIDR-224ENST00000524126 KRT5P13647 590 aa10.45□□□□□ -0.74
SPIDR-224ENST00000524126 RFC1P35251 1148 aaPredicted RBP10.45□□□□□ -0.74
SPIDR-224ENST00000524126 BMPR1AP36894 532 aa10.45□□□□□ -0.74
SPIDR-224ENST00000524126 HPCAL1P37235 193 aa10.45□□□□□ -0.74
SPIDR-224ENST00000524126 DPP6P42658 865 aa10.45□□□□□ -0.74
SPIDR-224ENST00000524126 SLC1A6P48664 564 aa10.45□□□□□ -0.74
SPIDR-224ENST00000524126 VAMP7P51809 220 aa10.45□□□□□ -0.74
SPIDR-224ENST00000524126 NFIAQ12857 509 aa10.45□□□□□ -0.74
SPIDR-224ENST00000524126 NFATC3Q12968 1075 aa10.45□□□□□ -0.74
SPIDR-224ENST00000524126 KLF10Q13118 480 aa10.45□□□□□ -0.74
SPIDR-224ENST00000524126 INAVAQ3KP66 663 aa10.45□□□□□ -0.74
SPIDR-224ENST00000524126 ZNF394Q53GI3 561 aa10.45□□□□□ -0.74
SPIDR-224ENST00000524126 FASTKD1Q53R41 847 aaKnown RBP10.45□□□□□ -0.74
SPIDR-224ENST00000524126 MTX3Q5HYI7 312 aa10.45□□□□□ -0.74
SPIDR-224ENST00000524126 WDR45BQ5MNZ6 344 aa10.45□□□□□ -0.74
SPIDR-224ENST00000524126 TTC39BQ5VTQ0 682 aaPredicted RBP10.45□□□□□ -0.74
SPIDR-224ENST00000524126 ZFP1Q6P2D0 407 aa10.45□□□□□ -0.74
SPIDR-224ENST00000524126 SLC38A6Q8IZM9 456 aa10.45□□□□□ -0.74
SPIDR-224ENST00000524126 NDUFAF2Q8N183 169 aa10.45□□□□□ -0.74
SPIDR-224ENST00000524126 LRRC47Q8N1G4 583 aaKnown RBP10.45□□□□□ -0.74
SPIDR-224ENST00000524126 EXD1Q8NHP7 514 aa10.45□□□□□ -0.74
SPIDR-224ENST00000524126 FIZ1Q96SL8 496 aa10.45□□□□□ -0.74
SPIDR-224ENST00000524126 EYA3Q99504 573 aa10.45□□□□□ -0.74
SPIDR-224ENST00000524126 PSD2Q9BQI7 771 aa10.45□□□□□ -0.74
SPIDR-224ENST00000524126 SLC4A5Q9BY07 1137 aa10.45□□□□□ -0.74
SPIDR-224ENST00000524126 MROQ9BYG7 248 aa10.45□□□□□ -0.74
SPIDR-224ENST00000524126 TRPV6Q9H1D0 765 aa10.45□□□□□ -0.74
SPIDR-224ENST00000524126 MRGBPQ9NV56 204 aa10.45□□□□□ -0.74
SPIDR-224ENST00000524126 IFT52Q9Y366 437 aa10.45□□□□□ -0.74
SPIDR-224ENST00000524126 COL4A5P29400 1685 aa10.45□□□□□ -0.74
SPIDR-224ENST00000524126 YDJCA8MPS7 323 aa10.45□□□□□ -0.74
SPIDR-224ENST00000524126 ZNF701M0R085 212 aaPredicted RBP10.45□□□□□ -0.74
SPIDR-224ENST00000524126 EIF3DO15371 548 aaKnown RBP eCLIP10.45□□□□□ -0.74
SPIDR-224ENST00000524126 ENO3P13929 434 aaPredicted RBP10.45□□□□□ -0.74
SPIDR-224ENST00000524126 ACAT1P24752 427 aaKnown RBP10.45□□□□□ -0.74
SPIDR-224ENST00000524126 DCKP27707 260 aa10.45□□□□□ -0.74
SPIDR-224ENST00000524126 ADSLP30566 484 aaPredicted RBP10.45□□□□□ -0.74
SPIDR-224ENST00000524126 RPL22P35268 128 aaKnown RBP10.45□□□□□ -0.74
SPIDR-224ENST00000524126 CLK3P49761 638 aaKnown RBP10.45□□□□□ -0.74
SPIDR-224ENST00000524126 HNRNPFP52597 415 aaKnown RBP10.45□□□□□ -0.74
SPIDR-224ENST00000524126 CSE1LP55060 971 aaKnown RBP10.45□□□□□ -0.74
SPIDR-224ENST00000524126 BASP1P80723 227 aaKnown RBP10.45□□□□□ -0.74
SPIDR-224ENST00000524126 NEDD8Q15843 81 aa10.45□□□□□ -0.74
SPIDR-224ENST00000524126 CHST15Q7LFX5 561 aaPredicted RBP10.45□□□□□ -0.74
SPIDR-224ENST00000524126 TTC30AQ86WT1 665 aa10.45□□□□□ -0.74
SPIDR-224ENST00000524126 TMEM126BQ8IUX1 230 aa10.45□□□□□ -0.74
SPIDR-224ENST00000524126 ELMOD1Q8N336 334 aa10.45□□□□□ -0.74
SPIDR-224ENST00000524126 UBR7Q8N806 425 aa10.45□□□□□ -0.74
SPIDR-224ENST00000524126 SLC43A3Q8NBI5 491 aa10.45□□□□□ -0.74
SPIDR-224ENST00000524126 ADAM32Q8TC27 787 aa10.45□□□□□ -0.74
SPIDR-224ENST00000524126 CALML6Q8TD86 181 aa10.45□□□□□ -0.74
SPIDR-224ENST00000524126 PDCD6IPQ8WUM4 868 aaKnown RBP10.45□□□□□ -0.74
SPIDR-224ENST00000524126 SHC3Q92529 594 aa10.45□□□□□ -0.74
SPIDR-224ENST00000524126 FEM1CQ96JP0 617 aa10.45□□□□□ -0.74
SPIDR-224ENST00000524126 C11orf70Q9BRQ4 267 aa10.45□□□□□ -0.74
SPIDR-224ENST00000524126 POLR1BQ9H9Y6 1135 aa10.45□□□□□ -0.74
SPIDR-224ENST00000524126 PARVGQ9HBI0 331 aa10.45□□□□□ -0.74
SPIDR-224ENST00000524126 ZNF277Q9NRM2 450 aaPredicted RBP10.45□□□□□ -0.74
SPIDR-224ENST00000524126 ATP11BQ9Y2G3 1177 aa10.45□□□□□ -0.74
SPIDR-224ENST00000524126 PCDHGA11Q9Y5H2 935 aa10.45□□□□□ -0.74
SPIDR-224ENST00000524126 E7ESA3 106 aa10.44□□□□□ -0.74
SPIDR-224ENST00000524126 CLOCKO15516 846 aa10.44□□□□□ -0.74
SPIDR-224ENST00000524126 HTRA2O43464 458 aaPredicted RBP10.44□□□□□ -0.74
SPIDR-224ENST00000524126 FAM189A1O60320 539 aa10.44□□□□□ -0.74
SPIDR-224ENST00000524126 CAPNS1P04632 268 aa10.44□□□□□ -0.74
SPIDR-224ENST00000524126 CFHP08603 1231 aa10.44□□□□□ -0.74
SPIDR-224ENST00000524126 MAP4P27816 1152 aaKnown RBP10.44□□□□□ -0.74
SPIDR-224ENST00000524126 SLC16A2P36021 539 aa10.44□□□□□ -0.74
SPIDR-224ENST00000524126 OPRL1P41146 370 aa10.44□□□□□ -0.74
SPIDR-224ENST00000524126 PSMC5P62195 406 aa10.44□□□□□ -0.74
SPIDR-224ENST00000524126 PTP4A2Q12974 167 aa10.44□□□□□ -0.74
SPIDR-224ENST00000524126 CCDC58Q4VC31 144 aa10.44□□□□□ -0.74
SPIDR-224ENST00000524126 TTBK2Q6IQ55 1244 aa10.44□□□□□ -0.74
SPIDR-224ENST00000524126 TTC33Q6PID6 262 aaPredicted RBP10.44□□□□□ -0.74
SPIDR-224ENST00000524126 BNC2Q6ZN30 1099 aaPredicted RBP10.44□□□□□ -0.74
SPIDR-224ENST00000524126 SNX32Q86XE0 403 aa10.44□□□□□ -0.74
SPIDR-224ENST00000524126 DSELQ8IZU8 1212 aa10.44□□□□□ -0.74
SPIDR-224ENST00000524126 PDIK1LQ8N165 341 aa10.44□□□□□ -0.74
SPIDR-224ENST00000524126 EGLN2Q96KS0 407 aa10.44□□□□□ -0.74
SPIDR-224ENST00000524126 PPP1R36Q96LQ0 422 aa10.44□□□□□ -0.74
SPIDR-224ENST00000524126 DOK1Q99704 481 aa10.44□□□□□ -0.74
SPIDR-224ENST00000524126 RTKNQ9BST9 563 aa10.44□□□□□ -0.74
SPIDR-224ENST00000524126 COA1Q9GZY4 146 aa10.44□□□□□ -0.74
SPIDR-224ENST00000524126 SMARCAD1Q9H4L7 1026 aa10.44□□□□□ -0.74
SPIDR-224ENST00000524126 NANOGQ9H9S0 305 aa10.44□□□□□ -0.74
SPIDR-224ENST00000524126 POLE4Q9NR33 117 aa10.44□□□□□ -0.74
SPIDR-224ENST00000524126 SMYD2Q9NRG4 433 aa10.44□□□□□ -0.74
SPIDR-224ENST00000524126 FBXO9Q9UK97 447 aaPredicted RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms