RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 MFN1Q8IWA4 741 aa20.73■□□□□ 0.91
UBE2D3-220ENST00000505307 CYB5D2Q8WUJ1 264 aa20.73■□□□□ 0.91
UBE2D3-220ENST00000505307 FAM149B1Q96BN6 582 aa20.73■□□□□ 0.91
UBE2D3-220ENST00000505307 FCRL2Q96LA5 508 aaPredicted RBP20.73■□□□□ 0.91
UBE2D3-220ENST00000505307 MED15Q96RN5 788 aa20.73■□□□□ 0.91
UBE2D3-220ENST00000505307 SLC4A5Q9BY07 1137 aa20.73■□□□□ 0.91
UBE2D3-220ENST00000505307 RWDD2AQ9UIY3 292 aa20.73■□□□□ 0.91
UBE2D3-220ENST00000505307 GOLGA6L7A0A1B0GV03 622 aa20.72■□□□□ 0.91
UBE2D3-220ENST00000505307 CAPN9O14815 690 aa20.72■□□□□ 0.91
UBE2D3-220ENST00000505307 BCAT2O15382 392 aaPredicted RBP20.72■□□□□ 0.91
UBE2D3-220ENST00000505307 GJB3O75712 270 aa20.72■□□□□ 0.91
UBE2D3-220ENST00000505307 ASLP04424 464 aa20.72■□□□□ 0.91
UBE2D3-220ENST00000505307 SLC6A4P31645 630 aa20.72■□□□□ 0.91
UBE2D3-220ENST00000505307 SGSHP51688 502 aa20.72■□□□□ 0.91
UBE2D3-220ENST00000505307 GRIK2Q13002 908 aa20.72■□□□□ 0.91
UBE2D3-220ENST00000505307 IL27RAQ6UWB1 636 aa20.72■□□□□ 0.91
UBE2D3-220ENST00000505307 UNQ6494/PRO21346Q6UXR6 183 aa20.72■□□□□ 0.91
UBE2D3-220ENST00000505307 TMEM110Q86TL2 294 aa20.72■□□□□ 0.91
UBE2D3-220ENST00000505307 KDM1BQ8NB78 822 aa20.72■□□□□ 0.91
UBE2D3-220ENST00000505307 ZNF606Q8WXB4 792 aa20.72■□□□□ 0.91
UBE2D3-220ENST00000505307 TTC17Q96AE7 1141 aa20.72■□□□□ 0.91
UBE2D3-220ENST00000505307 SLC39A13Q96H72 371 aa20.72■□□□□ 0.91
UBE2D3-220ENST00000505307 ADAM33Q9BZ11 813 aa20.72■□□□□ 0.91
UBE2D3-220ENST00000505307 MIR1-1HGQ9H1L0 117 aa20.72■□□□□ 0.91
UBE2D3-220ENST00000505307 TMEM8BA6NDV4 472 aa20.71■□□□□ 0.91
UBE2D3-220ENST00000505307 LETM1O95202 739 aaPredicted RBP20.71■□□□□ 0.91
UBE2D3-220ENST00000505307 CALCAP01258 141 aa20.71■□□□□ 0.91
UBE2D3-220ENST00000505307 CD70P32970 193 aa20.71■□□□□ 0.91
UBE2D3-220ENST00000505307 ST8SIA6P61647 398 aa20.71■□□□□ 0.91
UBE2D3-220ENST00000505307 SFSWAPQ12872 951 aaKnown RBP20.71■□□□□ 0.91
UBE2D3-220ENST00000505307 TTC31Q49AM3 519 aaPredicted RBP20.71■□□□□ 0.91
UBE2D3-220ENST00000505307 NADSYN1Q6IA69 706 aa20.71■□□□□ 0.91
UBE2D3-220ENST00000505307 ZCCHC9Q8N567 271 aaKnown RBP20.71■□□□□ 0.91
UBE2D3-220ENST00000505307 SCNM1Q9BWG6 230 aa20.71■□□□□ 0.91
UBE2D3-220ENST00000505307 THAP9Q9H5L6 903 aa20.71■□□□□ 0.91
UBE2D3-220ENST00000505307 PRSS16Q9NQE7 514 aa20.71■□□□□ 0.91
UBE2D3-220ENST00000505307 STIM2Q9P246 746 aa20.71■□□□□ 0.91
UBE2D3-220ENST00000505307 KIAA1468Q9P260 1216 aa20.71■□□□□ 0.91
UBE2D3-220ENST00000505307 SCML1Q9UN30 329 aa20.71■□□□□ 0.91
UBE2D3-220ENST00000505307 NAALADL1Q9UQQ1 740 aa20.71■□□□□ 0.91
UBE2D3-220ENST00000505307 NEUROG3Q9Y4Z2 214 aa20.71■□□□□ 0.91
UBE2D3-220ENST00000505307 ZFHX4Q86UP3 3567 aa20.71■□□□□ 0.91
UBE2D3-220ENST00000505307 USP24Q9UPU5 2620 aa20.71■□□□□ 0.91
UBE2D3-220ENST00000505307 ADAMTS9Q9P2N4 1935 aa20.7■□□□□ 0.91
UBE2D3-220ENST00000505307 APOEP02649 317 aa20.7■□□□□ 0.9
UBE2D3-220ENST00000505307 DNTTP04053 509 aa20.7■□□□□ 0.9
UBE2D3-220ENST00000505307 ZNF883P0CG24 379 aa20.7■□□□□ 0.9
UBE2D3-220ENST00000505307 GNA15P30679 374 aa20.7■□□□□ 0.9
UBE2D3-220ENST00000505307 YWHAZP63104 245 aaKnown RBP20.7■□□□□ 0.9
UBE2D3-220ENST00000505307 CDH18Q13634 790 aa20.7■□□□□ 0.9
UBE2D3-220ENST00000505307 ZNF423Q2M1K9 1284 aa20.7■□□□□ 0.9
UBE2D3-220ENST00000505307 MS4A13Q5J8X5 152 aa20.7■□□□□ 0.9
UBE2D3-220ENST00000505307 DENND1BQ6P3S1 775 aa20.7■□□□□ 0.9
UBE2D3-220ENST00000505307 OR2I1PQ8NGU4 316 aa20.7■□□□□ 0.9
UBE2D3-220ENST00000505307 WFDC5Q8TCV5 224 aa20.7■□□□□ 0.9
UBE2D3-220ENST00000505307 LMLNQ96KR4 655 aa20.7■□□□□ 0.9
UBE2D3-220ENST00000505307 BTBD1Q9H0C5 482 aa20.7■□□□□ 0.9
UBE2D3-220ENST00000505307 POPDC2Q9HBU9 364 aa20.7■□□□□ 0.9
UBE2D3-220ENST00000505307 PCDHB9Q9Y5E1 797 aa20.7■□□□□ 0.9
UBE2D3-220ENST00000505307 SPAARA0A1B0GVQ0 90 aa20.69■□□□□ 0.9
UBE2D3-220ENST00000505307 GTPBP10A4D1E9 387 aaKnown RBP20.69■□□□□ 0.9
UBE2D3-220ENST00000505307 THAP12O43422 761 aa20.69■□□□□ 0.9
UBE2D3-220ENST00000505307 MOCS3O95396 460 aa20.69■□□□□ 0.9
UBE2D3-220ENST00000505307 CER1O95813 267 aa20.69■□□□□ 0.9
UBE2D3-220ENST00000505307 SPINK2P20155 84 aa20.69■□□□□ 0.9
UBE2D3-220ENST00000505307 UBE2HP62256 183 aa20.69■□□□□ 0.9
UBE2D3-220ENST00000505307 RPS14P62263 151 aaKnown RBP20.69■□□□□ 0.9
UBE2D3-220ENST00000505307 RPS24P62847 133 aaKnown RBP20.69■□□□□ 0.9
UBE2D3-220ENST00000505307 ARID5BQ14865 1188 aa20.69■□□□□ 0.9
UBE2D3-220ENST00000505307 ZNF776Q68DI1 518 aaPredicted RBP20.69■□□□□ 0.9
UBE2D3-220ENST00000505307 TRIM65Q6PJ69 517 aa20.69■□□□□ 0.9
UBE2D3-220ENST00000505307 GBP6Q6ZN66 633 aa20.69■□□□□ 0.9
UBE2D3-220ENST00000505307 FAM124AQ86V42 546 aa20.69■□□□□ 0.9
UBE2D3-220ENST00000505307 CACUL1Q86Y37 369 aa20.69■□□□□ 0.9
UBE2D3-220ENST00000505307 KDF1Q8NAX2 398 aaPredicted RBP20.69■□□□□ 0.9
UBE2D3-220ENST00000505307 C1orf216Q8TAB5 229 aa20.69■□□□□ 0.9
UBE2D3-220ENST00000505307 BTN2A3PQ96KV6 586 aa20.69■□□□□ 0.9
UBE2D3-220ENST00000505307 PRICKLE1Q96MT3 831 aaPredicted RBP20.69■□□□□ 0.9
UBE2D3-220ENST00000505307 SGK2Q9HBY8 427 aa20.69■□□□□ 0.9
UBE2D3-220ENST00000505307 OSGEPQ9NPF4 335 aa20.69■□□□□ 0.9
UBE2D3-220ENST00000505307 SLC12A6Q9UHW9 1150 aa20.69■□□□□ 0.9
UBE2D3-220ENST00000505307 EIF2B4Q9UI10 523 aaKnown RBP20.69■□□□□ 0.9
UBE2D3-220ENST00000505307 E5RJQ4 531 aa20.68■□□□□ 0.9
UBE2D3-220ENST00000505307 PAPSS1O43252 624 aaPredicted RBP20.68■□□□□ 0.9
UBE2D3-220ENST00000505307 RNASEH1O60930 286 aaKnown RBP20.68■□□□□ 0.9
UBE2D3-220ENST00000505307 GLI1P08151 1106 aa20.68■□□□□ 0.9
UBE2D3-220ENST00000505307 SLC2A3P11169 496 aa20.68■□□□□ 0.9
UBE2D3-220ENST00000505307 AFF3P51826 1226 aaKnown RBP20.68■□□□□ 0.9
UBE2D3-220ENST00000505307 TRIP6Q15654 476 aaKnown RBP20.68■□□□□ 0.9
UBE2D3-220ENST00000505307 HNRNPA1L2Q32P51 320 aaKnown RBP20.68■□□□□ 0.9
UBE2D3-220ENST00000505307 SYPL2Q5VXT5 272 aa20.68■□□□□ 0.9
UBE2D3-220ENST00000505307 USP30Q70CQ3 517 aa20.68■□□□□ 0.9
UBE2D3-220ENST00000505307 TAC4Q86UU9 113 aa20.68■□□□□ 0.9
UBE2D3-220ENST00000505307 CARNMT1Q8N4J0 409 aa20.68■□□□□ 0.9
UBE2D3-220ENST00000505307 ZNF366Q8N895 744 aa20.68■□□□□ 0.9
UBE2D3-220ENST00000505307 NUCKS1Q9H1E3 243 aaKnown RBP20.68■□□□□ 0.9
UBE2D3-220ENST00000505307 RSPH9Q9H1X1 276 aaPredicted RBP20.68■□□□□ 0.9
UBE2D3-220ENST00000505307 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.68■□□□□ 0.9
UBE2D3-220ENST00000505307 KIAA1522Q9P206 1035 aaPredicted RBP20.68■□□□□ 0.9
UBE2D3-220ENST00000505307 APEX2Q9UBZ4 518 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms