RNA–Protein interactions for RNA: ENST00000487266.1

GABPA-203, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

TSL 2

Gene GABPA, Length 780 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-203ENST00000487266 GON4LQ3T8J9 2241 aa16.43■□□□□ 0.22
GABPA-203ENST00000487266 PATE3B3GLJ2 98 aa16.43■□□□□ 0.22
GABPA-203ENST00000487266 TPM2P07951 284 aa16.43■□□□□ 0.22
GABPA-203ENST00000487266 TACR2P21452 398 aa16.43■□□□□ 0.22
GABPA-203ENST00000487266 RNASE9P60153 205 aaKnown RBP16.43■□□□□ 0.22
GABPA-203ENST00000487266 LMAN2Q12907 356 aa16.43■□□□□ 0.22
GABPA-203ENST00000487266 NME3Q13232 169 aa16.43■□□□□ 0.22
GABPA-203ENST00000487266 ENPP2Q13822 863 aa16.43■□□□□ 0.22
GABPA-203ENST00000487266 EIF4HQ15056 248 aaKnown RBP16.43■□□□□ 0.22
GABPA-203ENST00000487266 PTPRNQ16849 979 aa16.43■□□□□ 0.22
GABPA-203ENST00000487266 FSCBQ5H9T9 825 aa16.43■□□□□ 0.22
GABPA-203ENST00000487266 EFHC1Q5JVL4 640 aa16.43■□□□□ 0.22
GABPA-203ENST00000487266 NAA35Q5VZE5 725 aa16.43■□□□□ 0.22
GABPA-203ENST00000487266 KIAA1324Q6UXG2 1013 aaKnown RBP16.43■□□□□ 0.22
GABPA-203ENST00000487266 SLC26A9Q7LBE3 791 aa16.43■□□□□ 0.22
GABPA-203ENST00000487266 CARNMT1Q8N4J0 409 aa16.43■□□□□ 0.22
GABPA-203ENST00000487266 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.43■□□□□ 0.22
GABPA-203ENST00000487266 UCMAQ8WVF2 138 aa16.43■□□□□ 0.22
GABPA-203ENST00000487266 CPA5Q8WXQ8 436 aa16.43■□□□□ 0.22
GABPA-203ENST00000487266 AZIN2Q96A70 460 aa16.43■□□□□ 0.22
GABPA-203ENST00000487266 LMLNQ96KR4 655 aa16.43■□□□□ 0.22
GABPA-203ENST00000487266 PCMTD1Q96MG8 357 aaPredicted RBP16.43■□□□□ 0.22
GABPA-203ENST00000487266 CDV3Q9UKY7 258 aaKnown RBP16.43■□□□□ 0.22
GABPA-203ENST00000487266 IGHV1OR15-9A0A0B4J2B8 117 aa16.42■□□□□ 0.22
GABPA-203ENST00000487266 BCLAF3A2AJT9 711 aaKnown RBP16.42■□□□□ 0.22
GABPA-203ENST00000487266 EPHX1P07099 455 aa16.42■□□□□ 0.22
GABPA-203ENST00000487266 GLI1P08151 1106 aa16.42■□□□□ 0.22
GABPA-203ENST00000487266 CHRNB2P17787 502 aa16.42■□□□□ 0.22
GABPA-203ENST00000487266 SOX5P35711 763 aa16.42■□□□□ 0.22
GABPA-203ENST00000487266 IRAK1P51617 712 aa16.42■□□□□ 0.22
GABPA-203ENST00000487266 NOMO3P69849 1222 aa16.42■□□□□ 0.22
GABPA-203ENST00000487266 CDK17Q00537 523 aa16.42■□□□□ 0.22
GABPA-203ENST00000487266 FMO1Q01740 532 aa16.42■□□□□ 0.22
GABPA-203ENST00000487266 CENPCQ03188 943 aa16.42■□□□□ 0.22
GABPA-203ENST00000487266 ARID5AQ03989 594 aa16.42■□□□□ 0.22
GABPA-203ENST00000487266 UBXN1Q04323 297 aa16.42■□□□□ 0.22
GABPA-203ENST00000487266 STARD3Q14849 445 aa16.42■□□□□ 0.22
GABPA-203ENST00000487266 AASDHQ4L235 1098 aaPredicted RBP16.42■□□□□ 0.22
GABPA-203ENST00000487266 FNDC3BQ53EP0 1204 aaKnown RBP16.42■□□□□ 0.22
GABPA-203ENST00000487266 MBLAC2Q68D91 279 aa16.42■□□□□ 0.22
GABPA-203ENST00000487266 TRNP1Q6NT89 227 aa16.42■□□□□ 0.22
GABPA-203ENST00000487266 SERPINA13PQ6UXR4 307 aa16.42■□□□□ 0.22
GABPA-203ENST00000487266 KIAA0907Q7Z7F0 614 aaPredicted RBP16.42■□□□□ 0.22
GABPA-203ENST00000487266 XYLT1Q86Y38 959 aa16.42■□□□□ 0.22
GABPA-203ENST00000487266 DHX40Q8IX18 779 aaKnown RBP16.42■□□□□ 0.22
GABPA-203ENST00000487266 AHI1Q8N157 1196 aa16.42■□□□□ 0.22
GABPA-203ENST00000487266 WFIKKN2Q8TEU8 576 aa16.42■□□□□ 0.22
GABPA-203ENST00000487266 MTG2Q9H4K7 406 aa16.42■□□□□ 0.22
GABPA-203ENST00000487266 ANLNQ9NQW6 1124 aa16.42■□□□□ 0.22
GABPA-203ENST00000487266 INTS6Q9UL03 887 aaKnown RBP16.42■□□□□ 0.22
GABPA-203ENST00000487266 PCDHGA5Q9Y5G8 931 aa16.42■□□□□ 0.22
GABPA-203ENST00000487266 KCNU1A8MYU2 1149 aa16.41■□□□□ 0.22
GABPA-203ENST00000487266 GOLGA8SH3BPF8 625 aa16.41■□□□□ 0.22
GABPA-203ENST00000487266 I6L893 689 aaPredicted RBP16.41■□□□□ 0.22
GABPA-203ENST00000487266 M0QYT0 321 aa16.41■□□□□ 0.22
GABPA-203ENST00000487266 MAP3K13O43283 966 aa16.41■□□□□ 0.22
GABPA-203ENST00000487266 LUC7L3O95232 432 aaKnown RBP16.41■□□□□ 0.22
GABPA-203ENST00000487266 CAVIN2O95810 425 aa16.41■□□□□ 0.22
GABPA-203ENST00000487266 ZNF806P0C7X5 589 aa16.41■□□□□ 0.22
GABPA-203ENST00000487266 CDK11BP21127 795 aaKnown RBP16.41■□□□□ 0.22
GABPA-203ENST00000487266 COPAP53621 1224 aa16.41■□□□□ 0.22
GABPA-203ENST00000487266 ATXN1P54253 815 aaKnown RBP16.41■□□□□ 0.22
GABPA-203ENST00000487266 RPL6Q02878 288 aaKnown RBP16.41■□□□□ 0.22
GABPA-203ENST00000487266 CDH18Q13634 790 aa16.41■□□□□ 0.22
GABPA-203ENST00000487266 PUM1Q14671 1186 aaKnown RBP eCLIP16.41■□□□□ 0.22
GABPA-203ENST00000487266 MPP7Q5T2T1 576 aa16.41■□□□□ 0.22
GABPA-203ENST00000487266 FAM102AQ5T9C2 384 aaPredicted RBP16.41■□□□□ 0.22
GABPA-203ENST00000487266 LPCAT2Q7L5N7 544 aa16.41■□□□□ 0.22
GABPA-203ENST00000487266 CYP2U1Q7Z449 544 aa16.41■□□□□ 0.22
GABPA-203ENST00000487266 PHLDB2Q86SQ0 1253 aa16.41■□□□□ 0.22
GABPA-203ENST00000487266 C11orf74Q86VG3 221 aa16.41■□□□□ 0.22
GABPA-203ENST00000487266 ERICH1Q86X53 443 aa16.41■□□□□ 0.22
GABPA-203ENST00000487266 C12orf50Q8NA57 414 aaPredicted RBP16.41■□□□□ 0.22
GABPA-203ENST00000487266 ANKRD20A12PQ8NF67 263 aa16.41■□□□□ 0.22
GABPA-203ENST00000487266 ZNF397Q8NF99 534 aaPredicted RBP16.41■□□□□ 0.22
GABPA-203ENST00000487266 PIGKQ92643 395 aa16.41■□□□□ 0.22
GABPA-203ENST00000487266 BTN2A3PQ96KV6 586 aa16.41■□□□□ 0.22
GABPA-203ENST00000487266 SPAG5Q96R06 1193 aa16.41■□□□□ 0.22
GABPA-203ENST00000487266 PRMT1Q99873 361 aaKnown RBP16.41■□□□□ 0.22
GABPA-203ENST00000487266 DDX50Q9BQ39 737 aaKnown RBP16.41■□□□□ 0.22
GABPA-203ENST00000487266 PIGVQ9NUD9 493 aa16.41■□□□□ 0.22
GABPA-203ENST00000487266 ADAMTS9Q9P2N4 1935 aa16.41■□□□□ 0.22
GABPA-203ENST00000487266 NUMA1Q14980 2115 aa16.4■□□□□ 0.22
GABPA-203ENST00000487266 TYW5A2RUC4 315 aaKnown RBP16.4■□□□□ 0.22
GABPA-203ENST00000487266 DCDC2BA2VCK2 349 aa16.4■□□□□ 0.22
GABPA-203ENST00000487266 PRR5-ARHGAP8B1AHC4 643 aa16.4■□□□□ 0.22
GABPA-203ENST00000487266 F5H5T6 163 aa16.4■□□□□ 0.22
GABPA-203ENST00000487266 SYNCRIPO60506 623 aaKnown RBP16.4■□□□□ 0.22
GABPA-203ENST00000487266 LSM8O95777 96 aaKnown RBP16.4■□□□□ 0.22
GABPA-203ENST00000487266 CCR1P32246 355 aa16.4■□□□□ 0.22
GABPA-203ENST00000487266 NOS2P35228 1153 aa16.4■□□□□ 0.22
GABPA-203ENST00000487266 FLT3P36888 993 aa16.4■□□□□ 0.22
GABPA-203ENST00000487266 CSKP41240 450 aa16.4■□□□□ 0.22
GABPA-203ENST00000487266 MATKP42679 507 aa16.4■□□□□ 0.22
GABPA-203ENST00000487266 CTSOP43234 321 aaPredicted RBP16.4■□□□□ 0.22
GABPA-203ENST00000487266 GABRB2P47870 512 aa16.4■□□□□ 0.22
GABPA-203ENST00000487266 SULT1E1P49888 294 aa16.4■□□□□ 0.22
GABPA-203ENST00000487266 ARHGAP8P85298 464 aa16.4■□□□□ 0.22
GABPA-203ENST00000487266 CDR2Q01850 454 aa16.4■□□□□ 0.22
GABPA-203ENST00000487266 SMYD5Q6GMV2 418 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms